BAC Information

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BAC

Clone NameB6Ng01-297G14
Chromosome16 (Build37)
Map Location 4,205,273 - 4,338,508
singlet/doubletdoublet
Overlap geneCrebbp, EG436332, Adcy9, EG620313
Upstream geneLOC100042251, LOC100042925, LOC100042270, LOC100042937, LOC100042283, Olfr161, Olfr162-ps1, Olfr163-ps1, LOC100042949, Mefv, EG620395, Zfp263, Olfr15, Zfp174, Zfp597, 1200013P24Rik, 1700037C18Rik, Cluap1, LOC664851, Nlrc3, Btbd12, Dnase1, Trap1
Downstream geneSrl, Tcfap4, Glis2, Magmas, Coro7, Vasn, Dnaja3, Nmral1, Hmox2, 5730403B10Rik, 4930562C15Rik, 1500031H01Rik, Mgrn1, Nudt16l1, Anks3, 4930451G09Rik, Sept12, EG432995, Rogdi, 3930401K13Rik, Ubn1, Ppl, Sec14l5, Nagpa, AU021092, Alg1, 5730409G15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297G14.bB6Ng01-297G14.g
ACCGA092774GA092775
length1,0241,178
definitionB6Ng01-297G14.b B6Ng01-297G14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(4,337,491 - 4,338,508)(4,205,273 - 4,206,449)
sequence
gaattccttgtcacactcttcctaaggctcacgagagggtcactgccaag
tttttctttcttctttcctttatgtggggtttgtgtaatcctgctgccac
cgctcggtcttcatcaggatgttagagtctctctttcctctatttgatgt
ttctcctagatatctcattatgtctgtgagcccctcctcccttgagtctt
ctcaccacattgaccctcccgagccgccatggcactccagtctgctgccg
tacttcatggccacactgattctgcacacctccctccaacaggctagcct
gccctaccagtctgtgccctttcctgccttgaagtctctcctcagcaaca
cacccaacagacttgctgggcccagagtccttttttggatgacctcctca
gtcttcgtagaagcatctgacctagcgtctccaccctgagttctcttggc
tgccttggagcattctgtttctgcttatacctgccccactgctcctcaga
cccattgccagacccacctccctgtcattgctgaatctcacatttcctca
ggcccatttctgccccactctgtgacagtaggatggacacctgtgatttt
ggtggcctagccacattagcatcttcctttgggaaaaaccgcattattgt
aggttctaagagtgtattacttattgatataatgaatgataagggttaat
ttcccctttttaaaatggtctacattttttaatggtctctctatgtatgt
gtattttatatatgcatggacgtacattctccaatattggacatatacat
gtttttacgcacacatttacacatgtatagaactgtgggatatattctct
ctctctctctctctctctctctctctctctctctcactcccttccccccc
cccccttcgggggtctggatcttgccaagaagttgcagctgcctttaaac
cccagaccctcctcccgcatgccctcctagtgctagaaccatacctggtg
tgccactggcctcttgccagcttt
gaattctacagagtgagacattcagaacgtctagggaataaatacatccc
ttctggattgttctttccacattttcacacttaaattgcactttgcattt
tcttagttttgcttccaagtttgagtgaacacagttctaagcaactgaaa
ggcatcaaccaaaatctcctgtacagtgttgtacaatggctaacaggtat
ctcagactgaattttaagacacagagtagtaaggaacagaatagaatcac
atatccgagacttatgaagtcgatgaattatgtttcaaaataatagggtt
tacagaacacttaagtttttaagattttaaatttttcatagctatcatgt
ttctactttaaaaaaattaaagtgaaggagctggagagatggcttagcag
gctgtttttccaaaggacctgcattcaattcccagcactcgcagggcagc
taaccatctctaaccccagctccaggtgattcaatgccttcttctggcct
ccaagggcaatgggcaaacatggtgcacaagcatacatgcggttaaaaca
catactatacacaaataaataaaccttacatttaaaaagtgaaaatggaa
acaaaaattaatagtactattacagaattctggttgtatatccagtgaag
tgagggtatacaatagacacagttacacatgggaatgtgtgctaacatgc
aaagctactacaatttccacccatgaacattctggtcagattatcatccc
aaagaaatccccagaagacaaggcacattcccatacccaagtaaatgcag
ggccaactcctgttcattgagcatttcttccaggacagctatttaccaga
catcacctcagacaatactgtaataatataatcatcatcccattttacaa
atgagaaaactgaggttatagagttaagacctggccagaactcaccaggt
aggtttatcaatggtgagagcattgagaatatgacactcaaaattagaga
aattaccaaaagaaatcaagagtagagagagagagaagagagaatgcgcg
caagtgaagatgtgtttgccacagaggggttgaacaagtagtgttaaaag
ctaagttcttagagaaaactaggagcattttactcaaaactccttagcca
actgtaagtgagcctcattggtgttgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_4337491_4338508
seq2: B6Ng01-297G14.b_49_1072 (reverse)

seq1  AAAGCTGGCAAGAG--CAGT-GCACA-CATGTAAGG-TCTAGCACTTAGG  45
      ||||||||||||||  |||| ||||| || ||| || |||||||| ||||
seq2  AAAGCTGGCAAGAGGCCAGTGGCACACCAGGTATGGTTCTAGCAC-TAGG  49

seq1  A-GGCA-GCGGGAGGAGGGTCTGGGGTTCAAAGCCAGCTGCAACTTCTTG  93
      | |||| ||||||||||||||||||||| |||| ||||||||||||||||
seq2  AGGGCATGCGGGAGGAGGGTCTGGGGTTTAAAGGCAGCTGCAACTTCTTG  99

seq1  GCAAGTTCCAGACCCCCGAGGGGGGGGGGGGAAGGGGAGAGAGAGAGAGA  143
      ||||| ||||||||||||| ||||||||||| | ||||| ||||||||||
seq2  GCAAGATCCAGACCCCCGAAGGGGGGGGGGGGAAGGGAGTGAGAGAGAGA  149

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATATCCCACAGTTCTATA  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATATCCCACAGTTCTATA  199

seq1  CATGTGTAAATGTGTGCGTAAAAACATGTATATGTCCAATATTGGAGAAT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTAAATGTGTGCGTAAAAACATGTATATGTCCAATATTGGAGAAT  249

seq1  GTACGTCCATGCATATATAAAATACACATACATAGAGAGACCATTAAAAA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACGTCCATGCATATATAAAATACACATACATAGAGAGACCATTAAAAA  299

seq1  ATGTAGACCATTTTAAAAAGGGGAAATTAACCCTTATCATTCATTATATC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGACCATTTTAAAAAGGGGAAATTAACCCTTATCATTCATTATATC  349

seq1  AATAAGTAATACACTCTTAGAACCTACAATAATGCGGTTTTTCCCAAAGG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTAATACACTCTTAGAACCTACAATAATGCGGTTTTTCCCAAAGG  399

seq1  AAGATGCTAATGTGGCTAGGCCACCAAAATCACAGGTGTCCATCCTACTG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCTAATGTGGCTAGGCCACCAAAATCACAGGTGTCCATCCTACTG  449

seq1  TCACAGAGTGGGGCAGAAATGGGCCTGAGGAAATGTGAGATTCAGCAATG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAGTGGGGCAGAAATGGGCCTGAGGAAATGTGAGATTCAGCAATG  499

seq1  ACAGGGAGGTGGGTCTGGCAATGGGTCTGAGGAGCAGTGGGGCAGGTATA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGAGGTGGGTCTGGCAATGGGTCTGAGGAGCAGTGGGGCAGGTATA  549

seq1  AGCAGAAACAGAATGCTCCAAGGCAGCCAAGAGAACTCAGGGTGGAGACG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAACAGAATGCTCCAAGGCAGCCAAGAGAACTCAGGGTGGAGACG  599

seq1  CTAGGTCAGATGCTTCTACGAAGACTGAGGAGGTCATCCAAAAAAGGACT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTCAGATGCTTCTACGAAGACTGAGGAGGTCATCCAAAAAAGGACT  649

seq1  CTGGGCCCAGCAAGTCTGTTGGGTGTGTTGCTGAGGAGAGACTTCAAGGC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCCCAGCAAGTCTGTTGGGTGTGTTGCTGAGGAGAGACTTCAAGGC  699

seq1  AGGAAAGGGCACAGACTGGTAGGGCAGGCTAGCCTGTTGGAGGGAGGTGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGGGCACAGACTGGTAGGGCAGGCTAGCCTGTTGGAGGGAGGTGT  749

seq1  GCAGAATCAGTGTGGCCATGAAGTACGGCAGCAGACTGGAGTGCCATGGC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAATCAGTGTGGCCATGAAGTACGGCAGCAGACTGGAGTGCCATGGC  799

seq1  GGCTCGGGAGGGTCAATGTGGTGAGAAGACTCAAGGGAGGAGGGGCTCAC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCGGGAGGGTCAATGTGGTGAGAAGACTCAAGGGAGGAGGGGCTCAC  849

seq1  AGACATAATGAGATATCTAGGAGAAACATCAAATAGAGGAAAGAGAGACT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATAATGAGATATCTAGGAGAAACATCAAATAGAGGAAAGAGAGACT  899

seq1  CTAACATCCTGATGAAGACCGAGCGGTGGCAGCAGGATTACACAAACCCC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATCCTGATGAAGACCGAGCGGTGGCAGCAGGATTACACAAACCCC  949

seq1  ACATAAAGGAAAGAAGAAAGAAAAACTTGGCAGTGACCCTCTCGTGAGCC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAGGAAAGAAGAAAGAAAAACTTGGCAGTGACCCTCTCGTGAGCC  999

seq1  TTAGGAAGAGTGTGACAAGGAATTC  1018
      |||||||||||||||||||||||||
seq2  TTAGGAAGAGTGTGACAAGGAATTC  1024

seq1: chr16_4205273_4206449
seq2: B6Ng01-297G14.g_72_1249

seq1  GAATTCTACAGAGTGAGACATTCAGAACGTCTAGGGAATAAATACATCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAGAGTGAGACATTCAGAACGTCTAGGGAATAAATACATCCC  50

seq1  TTCTGGATTGTTCTTTCCACATTTTCACACTTAAATTGCACTTTGCATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGATTGTTCTTTCCACATTTTCACACTTAAATTGCACTTTGCATTT  100

seq1  TCTTAGTTTTGCTTCCAAGTTTGAGTGAACACAGTTCTAAGCAACTGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTTTTGCTTCCAAGTTTGAGTGAACACAGTTCTAAGCAACTGAAA  150

seq1  GGCATCAACCAAAATCTCCTGTACAGTGTTGTACAATGGCTAACAGGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCAACCAAAATCTCCTGTACAGTGTTGTACAATGGCTAACAGGTAT  200

seq1  CTCAGACTGAATTTTAAGACACAGAGTAGTAAGGAACAGAATAGAATCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACTGAATTTTAAGACACAGAGTAGTAAGGAACAGAATAGAATCAC  250

seq1  ATATCCGAGACTTATGAAGTCGATGAATTATGTTTCAAAATAATAGGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCGAGACTTATGAAGTCGATGAATTATGTTTCAAAATAATAGGGTT  300

seq1  TACAGAACACTTAAGTTTTTAAGATTTTAAATTTTTCATAGCTATCATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAACACTTAAGTTTTTAAGATTTTAAATTTTTCATAGCTATCATGT  350

seq1  TTCTACTTTAAAAAAATTAAAGTGAAGGAGCTGGAGAGATGGCTTAGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTTTAAAAAAATTAAAGTGAAGGAGCTGGAGAGATGGCTTAGCAG  400

seq1  GCTGTTTTTCCAAAGGACCTGCATTCAATTCCCAGCACTCGCAGGGCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTTTCCAAAGGACCTGCATTCAATTCCCAGCACTCGCAGGGCAGC  450

seq1  TAACCATCTCTAACCCCAGCTCCAGGTGATTCAATGCCTTCTTCTGGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCATCTCTAACCCCAGCTCCAGGTGATTCAATGCCTTCTTCTGGCCT  500

seq1  CCAAGGGCAATGGGCAAACATGGTGCACAAGCATACATGCGGTTAAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGGCAATGGGCAAACATGGTGCACAAGCATACATGCGGTTAAAACA  550

seq1  CATACTATACACAAATAAATAAACCTTACATTTAAAAAGTGAAAATGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTATACACAAATAAATAAACCTTACATTTAAAAAGTGAAAATGGAA  600

seq1  ACAAAAATTAATAGTACTATTACAGAATTCTGGTTGTATATCCAGTGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATTAATAGTACTATTACAGAATTCTGGTTGTATATCCAGTGAAG  650

seq1  TGAGGGTATACAATAGACACAGTTACACATGGGAATGTGTGCTAACATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTATACAATAGACACAGTTACACATGGGAATGTGTGCTAACATGC  700

seq1  AAAGCTACTACAATTTCCACCCATGAACATTCTGGTCAGATTATCATCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTACTACAATTTCCACCCATGAACATTCTGGTCAGATTATCATCCC  750

seq1  AAAGAAATCCCCAGAAGACAAGGCACATTCCCATACCCAAGTAAATGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATCCCCAGAAGACAAGGCACATTCCCATACCCAAGTAAATGCAG  800

seq1  GGCCAACTCCTGTTCATTGAGCATTTCTTCCAGGACAGCTATTTACCAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAACTCCTGTTCATTGAGCATTTCTTCCAGGACAGCTATTTACCAGA  850

seq1  CATCACCTCAGACAATACTGTAATAATATAATCATCATCCCATTTTACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCTCAGACAATACTGTAATAATATAATCATCATCCCATTTTACAA  900

seq1  ATGAGAAAACTGAGGTTATAGAGTTAAGACCTGGCCAGAACTCACCAGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAAACTGAGGTTATAGAGTTAAGACCTGGCCAGAACTCACCAGGT  950

seq1  AGG-TTATCAATGGTGAGAGCATTGAG-ATATGACACTCAAAATTAAGAG  998
      ||| ||||||||||||||||||||||| ||||||||||||||||| ||||
seq2  AGGTTTATCAATGGTGAGAGCATTGAGAATATGACACTCAAAATT-AGAG  999

seq1  AAA-TAACAAAAGAAA-CAAGAG-AGAGAGAGAGAGAAAGAGAGAAAGGC  1045
      ||| || ||||||||| |||||| |||||||||||| ||||||| || ||
seq2  AAATTACCAAAAGAAATCAAGAGTAGAGAGAGAGAG-AAGAGAG-AATGC  1047

seq1  GCGCAAGTGAGAGTGTGGTTGCACCAGAGGGGT--GACAAGTAGTG-TAA  1092
      ||||||||||   |||| ||||  |||||||||   |||||||||| |||
seq2  GCGCAAGTGAAGATGTGTTTGCCACAGAGGGGTTGAACAAGTAGTGTTAA  1097

seq1  AAGCAGAG-TCTTAGGAGAAAACTAGGAGCATTTACCTCAAACATCTCTA  1141
      ||||  || ||||| |||||||||||||||||||  ||||||  ||  ||
seq2  AAGCTAAGTTCTTA-GAGAAAACTAGGAGCATTTTACTCAAAACTCCTTA  1146

seq1  AGGGCCCACCGTGTAAGTGAGCCTCCTT-GTGTTGTG  1177
         ||| ||  |||||||||||||| || ||||||||
seq2  ---GCCAAC--TGTAAGTGAGCCTCATTGGTGTTGTG  1178