BAC Information

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BAC

Clone NameB6Ng01-299P21
Chromosome16 (Build37)
Map Location 56,761,062 - 56,762,162
singlet/doubletsinglet
Overlap geneGpr128
Upstream geneNfkbiz, Gm1752, Lrriq2, EG667966, LOC629242, Rpl24, Zbtb11, Pcnp, Rg9mtd1, Senp7, Impg2, LOC672835, Abi3bp, Tfg
Downstream geneTmem45a, LOC668026, LOC668036, 2310005G13Rik, Tomm70a, Nit2, Tbc1d23, Tmem30c, 2610528E23Rik, 4631422O05Rik, Col8a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299P21.bB6Ng01-299P21.g
ACCGA094682GA094683
length1,0941,182
definitionB6Ng01-299P21.b B6Ng01-299P21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctttgggaatgacactcatacaagtccaaggcctcctgatagaa
ctggatgtggagtgttctgtaggctgcacatctttttgcctttgtacatt
tgcttcttcagttaacatctcacattgaaacattgcacattcctcaacag
tgcgcagccaactggagtttacagtcctgatgccaagtcaccctgcttct
agcttatctgaacccttgtgcctcactcctatttattaagcatcacacta
ccagggagataaacttttagcaaactgtgcaattgaataaaatctgctct
gttttttagattcttgcaagtgtatcagacataatagtatcacttttcct
acattttggtcaaataaatgtttgcataaatgaaaatatgttctttggaa
caccagattggcagtgttgttgggagagaaaagcttcattagacttctag
aatacagctctttcaagatatcgtgccacatgcaagactgtgaggggcct
agagatggtagtgcaattgttaccactaaatgacaactttcccagttata
taaaaggttccatgagtgccacaccatgaggaaataagtgcagagtttgt
gactgagccttcttacaacacagaaatgtaaggaacacttctgcgagagt
ttcatagaaatacagacttgggtacctggcactaatatttctatctgtgg
ttttgaaatgaagaattctctgtgacctgaaatagtatcattgagattac
tgcatcagagcctaaagacaaaccaaattattaggtgtgaaactaaacaa
gggttgtttttcccttcatggacttttaagttagtaattgtttggattca
gtgtgttttaaaaaacaatgcaaacaaggttcaagacatactttccccag
tattaagtaagatctgaagttcggtctgtccgtctgggttgagtccattt
gcagttttgttaatcaatattctaccagaaaccagagaattactagatcc
tgtaagaaagggaaattagattttaaatatctgcattttggtgaactgtg
atgtattgcaatggaactgtgctactgccatgagcatagaggct
gaattcagtaagaatgttacctattcagtaacattcaaattcacttctag
tagagacagtgaaactaattaggcattacagtttatttgtatagcgctag
aaaagcttggggctagtctacatagtaattacttaggataatagccgagt
cacacccaaacacaggaatacacaatggcctaggaaataggtggattgta
gtatgaaagagttagtagaagggaattcccctggagcaggttttttcact
aggcccagaggaatagtataatcaagtatttaccctggtggcaggtttaa
caatagactagcattgtatcagagcattcacctggctcctgtgtttagct
gattttaattaagggtttttcctattctcagcggtaaacatggccttgct
cccgccatctttttatgtatgcatcttctttttttgtgtcgatgtaactt
ggcggatgtgttcacctggctttcttggttttttcttctgtattaaaagc
ctggtgtttgcttagaaaaaattacattcggattcagcactcccttgtgt
ctgtgtgggtttgtcacccttttctcgccaactctttgcccatctgtctg
aaactctgatttcccatggattgagagaggccaactgagcccagtgcatg
gcacactcctgaatgatgtcattgtagttacttgagatatggtgtattcc
tagctaagatgactgttccaacctccccttatcctaagtaacttcctatg
aaactttcatcaatttctctttaaagcgttagccatgagggataagtcta
ctatagtcatagatcagtgcctagcccagtcatcatcagaaaggcttcct
ctggtagttgatgggaacagatccagagacctacagccaaacactaggca
gagagagatcaattggaaacttccaacatgtccctcctgttggagcttat
agaaccccaaggaggaggtagaggagatcatagtatctagaggacaccag
gaaaacacagctcacagaccaactggcagagctcataggagctcagcggg
ggagatggaagtggcagcattggagtcctgcatggactggcctagtccct
taccttcctaaggtttaggctggatctggtttttggtggaaactctctgt
accagacgtgaaatctctcccacacactgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_56761062_56762162
seq2: B6Ng01-299P21.b_46_1139

seq1  GAATTCCTTTGGGAATGACACTCATACAAGTCCAAGGCCTCCTGATAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTGGGAATGACACTCATACAAGTCCAAGGCCTCCTGATAGAA  50

seq1  CTGGATGTGGAGTGTTCTGTAGGCTGCACATCTTTTTGCCTTTGTACATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATGTGGAGTGTTCTGTAGGCTGCACATCTTTTTGCCTTTGTACATT  100

seq1  TGCTTCTTCAGTTAACATCTCACATTGAAACATTGCACATTCCTCAACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTTCAGTTAACATCTCACATTGAAACATTGCACATTCCTCAACAG  150

seq1  TGCGCAGCCAACTGGAGTTTACAGTCCTGATGCCAAGTCACCCTGCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCAGCCAACTGGAGTTTACAGTCCTGATGCCAAGTCACCCTGCTTCT  200

seq1  AGCTTATCTGAACCCTTGTGCCTCACTCCTATTTATTAAGCATCACACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTATCTGAACCCTTGTGCCTCACTCCTATTTATTAAGCATCACACTA  250

seq1  CCAGGGAGATAAACTTTTAGCAAACTGTGCAATTGAATAAAATCTGCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGAGATAAACTTTTAGCAAACTGTGCAATTGAATAAAATCTGCTCT  300

seq1  GTTTTTTAGATTCTTGCAAGTGTATCAGACATAATAGTATCACTTTTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTAGATTCTTGCAAGTGTATCAGACATAATAGTATCACTTTTCCT  350

seq1  ACATTTTGGTCAAATAAATGTTTGCATAAATGAAAATATGTTCTTTGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTGGTCAAATAAATGTTTGCATAAATGAAAATATGTTCTTTGGAA  400

seq1  CACCAGATTGGCAGTGTTGTTGGGAGAGAAAAGCTTCATTAGACTTCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGATTGGCAGTGTTGTTGGGAGAGAAAAGCTTCATTAGACTTCTAG  450

seq1  AATACAGCTCTTTCAAGATATCGTGCCACATGCAAGACTGTGAGGGGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGCTCTTTCAAGATATCGTGCCACATGCAAGACTGTGAGGGGCCT  500

seq1  AGAGATGGTAGTGCAATTGTTACCACTAAATGACAACTTTCCCAGTTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGGTAGTGCAATTGTTACCACTAAATGACAACTTTCCCAGTTATA  550

seq1  TAAAAGGTTCCATGAGTGCCACACCATGAGGAAATAAGTGCAGAGTTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGTTCCATGAGTGCCACACCATGAGGAAATAAGTGCAGAGTTTGT  600

seq1  GACTGAGCCTTCTTACAACACAGAAATGTAAGGAACACTTCTGCGAGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGCCTTCTTACAACACAGAAATGTAAGGAACACTTCTGCGAGAGT  650

seq1  TTCATAGAAATACAGACTTGGGTACCTGGCACTAATATTTCTATCTGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGAAATACAGACTTGGGTACCTGGCACTAATATTTCTATCTGTGG  700

seq1  TTTTGAAATGAAGAATTCTCTGTGACCTGAAATAGTATCATTGAGATTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAATGAAGAATTCTCTGTGACCTGAAATAGTATCATTGAGATTAC  750

seq1  TGCATCAGAGCCTAAAGACAAACCAAATTATTAGGTGTGAAACTAAACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCAGAGCCTAAAGACAAACCAAATTATTAGGTGTGAAACTAAACAA  800

seq1  GGGTTGTTTTTCCCTTCATGGACTTTTAAGTTAGTAATTGTTTGGATTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGTTTTTCCCTTCATGGACTTTTAAGTTAGTAATTGTTTGGATTCA  850

seq1  GTGTGTTTTAAAAAACAATGCAAACAAGGTTCAAGACATACTTTCCCCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTTAAAAAACAATGCAAACAAGGTTCAAGACATACTTTCCCCAG  900

seq1  TATTAAGTAAGATCTGAAGTTCGGTCTGTCCGTCTGGGTTGAGTCCATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGTAAGATCTGAAGTTCGGTCTGTCCGTCTGGGTTGAGTCCATTT  950

seq1  GCAGTTTTGTTAATCAATATTCTACCAGAAACCAGAGAATTACTAGATCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTTGTTAATCAATATTCTACCAGAAACCAGAGAATTACTAGATCC  1000

seq1  TGTAAGAAAGGGAAATTAGAATTTTAAATATCTGCATTTTGGTGAACTGT  1050
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGTAAGAAAGGGAAATTAG-ATTTTAAATATCTGCATTTTGGTGAACTGT  1049

seq1  GAATTGTTATTGGCAATGG-ACTGTTGCTTACTGCCATGAGCATAGAAGG  1099
      ||  || |||| ||||||| |||| ||| ||||||||||||||||| |||
seq2  GA--TG-TATT-GCAATGGAACTG-TGC-TACTGCCATGAGCATAG-AGG  1092

seq1  CT  1101
      ||
seq2  CT  1094