BAC Information

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BAC

Clone NameB6Ng01-300M21
Chromosome16 (Build37)
Map Location 83,619,116 - 83,620,267
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545172, LOC100039572
Downstream geneEG621729, LOC640489, LOC665664, LOC547311, LOC100039893
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300M21.bB6Ng01-300M21.g
ACCGA095286GA095287
length4311,152
definitionB6Ng01-300M21.b B6Ng01-300M21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atgaaattcaaaagcaaatgggtggaaatagaaaatatcatccttagaga
ggaaacacagtcacaaaaagcacacagaatgtactcactgacaagttgag
attaggcagaaagttcaggatacaacacataaaccatatgaagctcaaga
aggaagaacggggtatggctgcttcagtcctgcttaaaaggaggaagaaa
ataatcataagaggtagagggatggagagactggagagacagggagaaga
gggaaagggggcagcattaggtgtgagtggagatgggagagaagtgaaga
gggtgaagaaattgaactgaggtgtatagcagtggggagtggggaactgg
gcatatccactagaaagtcttatatgctgggaaaacacgagcctcctagg
accgaactgggttgatatgagctgaaatacc

gaattcctctgcttcacctcaaattaactccaggaatttaaaagataaaa
tatattggctccttcttattccctaacttcaacttgcctctgctgcatga
atagaatggacctgaactcaactccactgcttcctgtgctgactgtctga
actgaattcaactgacttaactctcaactgactgacagaaccgaatggca
atatagctcaggagatcttcatgactctgtctcttgtaggcagccatcaa
gatcaaaggtgtatatcaccatgcattggcctaagctattctttgcttaa
cttgcactgtactgggatggccttgaaatcagagatcaacttgcctctct
ctcctggaattaaagatgtgtctgtattccagccagatcacacagatgta
gaaaggccctggatttgaggccttatgagagcagccatgttgctggatta
aaattcctctacaaaatattaaataatcccatggaaaaaaatcatcacaa
tataatttatattttagaaatataatataaatagaattttggatgcttgt
atttcaaaatataaattaaaagacatgaagtaataacaaataaaagttat
aacatctcaaaaaaatttgacaatattaagtacttttagacaaatacata
taattgagagaccagaccaaatccgtctttggttctggctccattttaga
gaagctgacttaaagttgaacttgagttaacccccaagcctgaacgttca
ctagtctccagttcactccctaacaaccacccatgaggagggggaaaaaa
ggaaatcttggctccaagctgacagtctatgttatgcttgagactggttt
gcaggttactccctctctgttttctctgggcatctaaagagaactctatt
tcagtttttcctgctcaaaattattcttcaaacacttctcttgtgatagt
ctaaaaagttctttgggatagctcatctcttccagattataaacccaatc
ttttattttttacacattaatccagggccatttactccagtttcccttag
attattctatgaaacagcatcctgtgaccccagtcctttaatttttaagg
agaaaggcaagcacccatttaccctttacatttcaaaaaactagagatct
gc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_83619116_83620267
seq2: B6Ng01-300M21.g_66_1217 (reverse)

seq1  GCAGATCTCTAAATTTTTTTTTGAAATGTTAAAGGTAAATGGGTGCTTG-  49
      |||||||||||     ||||||||||||| || |||||||||||||||| 
seq2  GCAGATCTCTA----GTTTTTTGAAATGTAAAGGGTAAATGGGTGCTTGC  46

seq1  CTGTCTCC-TAAAAATTAAGGGACTGGGGTCACAGGATGCTGTTTCATAG  98
      || ||||| |||||||||| ||||||||||||||||||||||||||||||
seq2  CTTTCTCCTTAAAAATTAAAGGACTGGGGTCACAGGATGCTGTTTCATAG  96

seq1  AATAATCTAAAGGGAAACTGGAGTAAATGG-CCTGGATTAATGTGT-AAA  146
      |||||||| ||||||||||||||||||||| ||||||||||||||| |||
seq2  AATAATCT-AAGGGAAACTGGAGTAAATGGCCCTGGATTAATGTGTAAAA  145

seq1  AATAAAAGATTGGGTTTATAATCTGGAAGAGATGAGCTAT-CCAAAGAAC  195
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AATAAAAGATTGGGTTTATAATCTGGAAGAGATGAGCTATCCCAAAGAAC  195

seq1  TTTTTAGACTATCACAAGAGAAGTGTTTGAAGAATAATTTTGAGCAGGAA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGACTATCACAAGAGAAGTGTTTGAAGAATAATTTTGAGCAGGAA  245

seq1  AAACTGAAATAGAGTTCTCTTTAGATGCCCAGAGAAAACAGAGAGGGAGT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAAATAGAGTTCTCTTTAGATGCCCAGAGAAAACAGAGAGGGAGT  295

seq1  AACCTGCAAACCAGTCTCAAGCATAACATAGACTGTCAGCTTGGAGCCAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGCAAACCAGTCTCAAGCATAACATAGACTGTCAGCTTGGAGCCAA  345

seq1  GATTTCCTTTTTTCCCCCTCCTCATGGGTGGTTGTTAGGGAGTGAACTGG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCTTTTTTCCCCCTCCTCATGGGTGGTTGTTAGGGAGTGAACTGG  395

seq1  AGACTAGTGAACGTTCAGGCTTGGGGGTTAACTCAAGTTCAACTTTAAGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAGTGAACGTTCAGGCTTGGGGGTTAACTCAAGTTCAACTTTAAGT  445

seq1  CAGCTTCTCTAAAATGGAGCCAGAACCAAAGACGGATTTGGTCTGGTCTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCTCTAAAATGGAGCCAGAACCAAAGACGGATTTGGTCTGGTCTC  495

seq1  TCAATTATATGTATTTGTCTAAAAGTACTTAATATTGTCAAATTTTTTTG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTATATGTATTTGTCTAAAAGTACTTAATATTGTCAAATTTTTTTG  545

seq1  AGATGTTATAACTTTTATTTGTTATTACTTCATGTCTTTTAATTTATATT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTATAACTTTTATTTGTTATTACTTCATGTCTTTTAATTTATATT  595

seq1  TTGAAATACAAGCATCCAAAATTCTATTTATATTATATTTCTAAAATATA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATACAAGCATCCAAAATTCTATTTATATTATATTTCTAAAATATA  645

seq1  AATTATATTGTGATGATTTTTTTCCATGGGATTATTTAATATTTTGTAGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATATTGTGATGATTTTTTTCCATGGGATTATTTAATATTTTGTAGA  695

seq1  GGAATTTTAATCCAGCAACATGGCTGCTCTCATAAGGCCTCAAATCCAGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTTAATCCAGCAACATGGCTGCTCTCATAAGGCCTCAAATCCAGG  745

seq1  GCCTTTCTACATCTGTGTGATCTGGCTGGAATACAGACACATCTTTAATT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCTACATCTGTGTGATCTGGCTGGAATACAGACACATCTTTAATT  795

seq1  CCAGGAGAGAGAGGCAAGTTGATCTCTGATTTCAAGGCCATCCCAGTACA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGAGAGAGGCAAGTTGATCTCTGATTTCAAGGCCATCCCAGTACA  845

seq1  GTGCAAGTTAAGCAAAGAATAGCTTAGGCCAATGCATGGTGATATACACC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAGTTAAGCAAAGAATAGCTTAGGCCAATGCATGGTGATATACACC  895

seq1  TTTGATCTTGATGGCTGCCTACAAGAGACAGAGTCATGAAGATCTCCTGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATCTTGATGGCTGCCTACAAGAGACAGAGTCATGAAGATCTCCTGA  945

seq1  GCTATATTGCCATTCGGTTCTGTCAGTCAGTTGAGAGTTAAGTCAGTTGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATATTGCCATTCGGTTCTGTCAGTCAGTTGAGAGTTAAGTCAGTTGA  995

seq1  ATTCAGTTCAGACAGTCAGCACAGGAAGCAGTGGAGTTGAGTTCAGGTCC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTTCAGACAGTCAGCACAGGAAGCAGTGGAGTTGAGTTCAGGTCC  1045

seq1  ATTCTATTCATGCAGCAGAGGCAAGTTGAAGTTAGGGAATAAGAAGGAGC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATTCATGCAGCAGAGGCAAGTTGAAGTTAGGGAATAAGAAGGAGC  1095

seq1  CAATATATTTTATCTTTTAAATTCCTGGAGTTAATTTGAGGTGAAGCAGA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATATTTTATCTTTTAAATTCCTGGAGTTAATTTGAGGTGAAGCAGA  1145

seq1  GGAATTC  1152
      |||||||
seq2  GGAATTC  1152


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