BAC Information

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BAC

Clone NameB6Ng01-302E08
Chromosome16 (Build37)
Map Location 48,059,752 - 48,060,311
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC628757, LOC628776, EG667741
Downstream geneEG639644, EG637273, Dppa4, Dppa2, EG433023, Morc1, Trat1, EG667501, Retnlb, Retnla, Retnlg, 2310047C04Rik, C330027C09Rik, Myh15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302E08.bB6Ng01-302E08.g
ACCGA096365GA096366
length1,186554
definitionB6Ng01-302E08.b B6Ng01-302E08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgaatttagtagtagatatctactccagactgtcagaaaaggt
ggacagaggtctcattaggccatgtattaacttgcccattaactcaaaac
aatcttttagttttatcagacttccatgaaggccctgtcactcaagcaga
atcttgagtttgttttgttttgtgttgttttttgttgttgttgtttttgt
ttgttgtttttctggaacataattccaatggctattctctaccccagagc
caagacagagtagaccagagcagcaatgaacaatgttttagtagtgtgga
gaactgagtatgtgtttgtactggttagtttttattgtcaacttggcaca
gcctagagtgacttgggaagagggagtcttaattgagtaattgaccaaat
cagaccagcccgtgtctatgtttgttatagattggcttcatcgatgactg
atttggaaggaccagctcacggtttgtggttctacctacccctaggcagg
taagcttgtactatataaaaatattagctggaaatattctagtatgtgag
ctaattaagtggtattactggcttctctgttaaggcctaggtaactgtta
cttggctagcttgccattttgttctgttagtaatattataaggaaacttt
cttatatgctatttctgctgttactaggaaactttctcatgcccaagttg
actacagattctgtggtgttctgtgcccatggaaacgaatcatgttagaa
gtcagagaattgctttgtatagttactcacaataatcttggacctgaacc
aactacccagcagcactccattcatctgtgtatgagctttatactgtatt
catttttatatgctgcccctgggatggaccccaacataagagagacacct
gcaccaacataagaaactaagagacttccattttgagtaggggtgaagta
aagtttaaattcccaagactcccctgggaacttcattcctactgggaaga
aaggagaacatgtacatgggttaactgacacctggttggaagtaggacat
taatatagaccagaacaatcccttaccacagtttaaatacccttaacaat
tgggagcagtaaaaggcgtacaagaaggactgtcatacgtaagtccccat
acttttgtaaaaatctaagtttgtggtggtatatat
tttatatagaccaagctgcttcaaaatcagagatatccctgggtctgtct
gtctgctaggtgctgagataaaaggtgtgtgggaccaagtctgacttggc
tctcaggcatgattacatttctctatttggcatgctggaatggtctttga
aactgccttctgacaaacaactagggctcatctccctcctaaacgcagtt
taaatttctttgagcaacaagtatgtagcccaggaaggttccaccttgtt
atagagccaatgatgaccttgaacttccaatcttctggcctcaaaccttt
gaattcttgcataacaggcatgacccaccacatcaaggtcatggggtgca
gaagagctagcccaggctttgtgattctaggaaagttctctcctaattca
gatctatctccaaaaaccatacataaggttaatggatgcaagccatcttc
ctgactcaacctacctaagagatgacacaacagatcacagagcagtcagc
ttggctctttattccagaaaaaaaaatcacaattatgaaaaggcatttgt
gggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_48059752_48060311
seq2: B6Ng01-302E08.g_64_623

seq1  GAATTCTTTATATAGACCAAGCTGCTTCAAAATCAGAGATATCCCTGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATATAGACCAAGCTGCTTCAAAATCAGAGATATCCCTGGGT  50

seq1  CTGTCTGTCTGCTAGGTGCTGAGATAAAAGGTGTGTGGGACCAAGTCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTCTGCTAGGTGCTGAGATAAAAGGTGTGTGGGACCAAGTCTGA  100

seq1  CTTGGCTCTCAGGCATGATTACATTTCTCTATTTGGCATGCTGGAATGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTCTCAGGCATGATTACATTTCTCTATTTGGCATGCTGGAATGGT  150

seq1  CTTTGAAACTGCCTTCTGACAAACAACTAGGGCTCATCTCCCTCCTAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAACTGCCTTCTGACAAACAACTAGGGCTCATCTCCCTCCTAAAC  200

seq1  GCAGTTTAAATTTCTTTGAGCAACAAGTATGTAGCCCAGGAAGGTTCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTAAATTTCTTTGAGCAACAAGTATGTAGCCCAGGAAGGTTCCAC  250

seq1  CTTGTTATAGAGCCAATGATGACCTTGAACTTCCAATCTTCTGGCCTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTATAGAGCCAATGATGACCTTGAACTTCCAATCTTCTGGCCTCAA  300

seq1  ACCTTTGAATTCTTGCATAACAGGCATGACCCACCACATCAAGGTCATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTGAATTCTTGCATAACAGGCATGACCCACCACATCAAGGTCATGG  350

seq1  GGTGCAGAAGAGCTAGCCCAGGCTTTGTGATTCTAGGAAAGTTCTCTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCAGAAGAGCTAGCCCAGGCTTTGTGATTCTAGGAAAGTTCTCTCCT  400

seq1  AATTCAGATCTATCTCCAAAAACCATACATAAGGTTAATGGATGCAAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGATCTATCTCCAAAAACCATACATAAGGTTAATGGATGCAAGCC  450

seq1  ATCTTCCTGACTCAACCTACCTAAGAGATGACACAACAGATCACAGAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCTGACTCAACCTACCTAAGAGATGACACAACAGATCACAGAGCA  500

seq1  GTCAGCTTGGCTCTTTATTCCAGAAAAAAAAATCACAATTATGAAAAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCTTGGCTCTTTATTCCAGAAAAAAAAATCACAATTATGAAAAGGC  550

seq1  ATTTGTGGGG  560
      ||||||||||
seq2  ATTTGTGGGG  560