BAC Information

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BAC

Clone NameB6Ng01-303O18
Chromosome16 (Build37)
Map Location 61,907,172 - 61,908,290
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043524, LOC668183
Downstream geneLOC100043806, Nsun3, Arl13b, Stx19, Pros1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303O18.bB6Ng01-303O18.g
ACCGA097604GA097605
length1,112576
definitionB6Ng01-303O18.b B6Ng01-303O18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttgtagaccaggctggcctctcttcctttaatatctgccct
gtaagtcacatgacattgattattagtgtcaatacaaataatattagtta
atgacactctcactaaaaatatctgaacgtgtagcagctgagattttaat
gaatactaactagatgttttctggtttgtaggaatgagtttctggctctc
aaagtaatgtggatctgcttatatgtcaggccagttgtgcaaatctgtag
attgtcaatcacatcgcttgctcctatgaattcaatgagtagagtattca
tgtgcaaaacatccatcatatttaaataccttgtagcattttgtgtcata
acttcaacttttcatcacagataaaaatatcagaaagcatagagataaat
ctaactagtgaaatttgagtttaattccaaatgagtagtaggcttagtaa
atacagagagaaaaccctttatttctgtttgtggaattttacttttagtt
ctaaagtgtcagtggcttgaaaaatgagtcatttttgttcaacaatgagt
ttttgtcaaaataagcattagtagagaaactcagatgcaatgaactaaaa
ctctcctaggtttcttatttctcaaaatattcaatcaactttcatcaaaa
gccttacaaaaaaagttgtacgtcaaatctggacaattttttaaatgtca
ctataaattagaaatgcaatatcgacaatcttaacttagtgggcataaca
gaaattgtgatttacaactacatataaaccttatatgaaagtgaaatcaa
aattgtaagataatttgaggaatagctcaaagtaagattgggtagttggg
aaccaaatgttcaccacaaaaaaaacaaataaaggaaaaacttttgataa
agttaaaaaaaaaaagcatgggctttttagccatctttagaaaatgtgaa
aatgtgaaaagatgacttttctctaagtaaggaatgtggtcaggacttga
ttataacaacacatgtgacatttttctactattattttattcatattaat
aaacactaaatacaagttttaataacaatatacagaaatctgggctgtgc
tagagaatcttt

gaattctctttcactggtacagcaagtcttcacaggttcaaggacctttc
ctcccattgatgcaccacaaggctattctctgcttcatatgtggctagag
ccatgggtccctccatgtttactccttggttggtggtttagtccctggga
actctgggggatatgattggttgatattgttgtggtgttttttttttttt
tttttttgccattaaaaggcaactaatgatttatcctaggagctatgaca
cacgataaaatatggactgggtttatctatacaaaacttcaggaataact
tagttatgattttttattgtttttttttttagaccgggcttctctgtgta
gccctggatgtcctggaactcactttgtagaccaggttggcctcaaactc
aaaaatttccttgcctctgcctcccaagggctgggattaaaggtgtgtgc
caccactgcctggctagttttggttttaaaccttcagtgaacctgtggag
ctcacaaaggtgatggatgtttagccagataattactcctagtatatact
catgaaacatacaccactgtgaactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_61907172_61908290
seq2: B6Ng01-303O18.b_47_1158

seq1  GAATTCACTTTGTAGACCAGGCTGGCCTCTCTTCCTTTAATATCTGCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGCCTCTCTTCCTTTAATATCTGCCCT  50

seq1  GTAAGTCACATGACATTGATTATTAGTGTCAATACAAATAATATTAGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTCACATGACATTGATTATTAGTGTCAATACAAATAATATTAGTTA  100

seq1  ATGACACTCTCACTAAAAATATCTGAACGTGTAGCAGCTGAGATTTTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACACTCTCACTAAAAATATCTGAACGTGTAGCAGCTGAGATTTTAAT  150

seq1  GAATACTAACTAGATGTTTTCTGGTTTGTAGGAATGAGTTTCTGGCTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACTAACTAGATGTTTTCTGGTTTGTAGGAATGAGTTTCTGGCTCTC  200

seq1  AAAGTAATGTGGATCTGCTTATATGTCAGGCCAGTTGTGCAAATCTGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAATGTGGATCTGCTTATATGTCAGGCCAGTTGTGCAAATCTGTAG  250

seq1  ATTGTCAATCACATCGCTTGCTCCTATGAATTCAATGAGTAGAGTATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCAATCACATCGCTTGCTCCTATGAATTCAATGAGTAGAGTATTCA  300

seq1  TGTGCAAAACATCCATCATATTTAAATACCTTGTAGCATTTTGTGTCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAAAACATCCATCATATTTAAATACCTTGTAGCATTTTGTGTCATA  350

seq1  ACTTCAACTTTTCATCACAGATAAAAATATCAGAAAGCATAGAGATAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAACTTTTCATCACAGATAAAAATATCAGAAAGCATAGAGATAAAT  400

seq1  CTAACTAGTGAAATTTGAGTTTAATTCCAAATGAGTAGTAGGCTTAGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTAGTGAAATTTGAGTTTAATTCCAAATGAGTAGTAGGCTTAGTAA  450

seq1  ATACAGAGAGAAAACCCTTTATTTCTGTTTGTGGAATTTTACTTTTAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAGAGAAAACCCTTTATTTCTGTTTGTGGAATTTTACTTTTAGTT  500

seq1  CTAAAGTGTCAGTGGCTTGAAAAATGAGTCATTTTTGTTCAACAATGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGTGTCAGTGGCTTGAAAAATGAGTCATTTTTGTTCAACAATGAGT  550

seq1  TTTTGTCAAAATAAGCATTAGTAGAGAAACTCAGATGCAATGAACTAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCAAAATAAGCATTAGTAGAGAAACTCAGATGCAATGAACTAAAA  600

seq1  CTCTCCTAGGTTTCTTATTTCTCAAAATATTCAATCAACTTTCATCAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTAGGTTTCTTATTTCTCAAAATATTCAATCAACTTTCATCAAAA  650

seq1  GCCTTACAAAAAAAGTTGTACGTCAAATCTGGACAATTTTTTAAATGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTACAAAAAAAGTTGTACGTCAAATCTGGACAATTTTTTAAATGTCA  700

seq1  CTATAAATTAGAAATGCAATATCGACAATCTTAACTTAGTGGGCATAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAATTAGAAATGCAATATCGACAATCTTAACTTAGTGGGCATAACA  750

seq1  GAAATTGTGATTTACAACTACATATAAACCTTATATGAAAGTGAAATCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGTGATTTACAACTACATATAAACCTTATATGAAAGTGAAATCAA  800

seq1  AATTGTAAGATAATTTGAGGAATAGCTCAAAGTAAGATTGGGTAGTTGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTAAGATAATTTGAGGAATAGCTCAAAGTAAGATTGGGTAGTTGGG  850

seq1  AACCAAATGTTCACCACAAAAAAAACAAATAAAGGAAAAACTTTTGATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAATGTTCACCACAAAAAAAACAAATAAAGGAAAAACTTTTGATAA  900

seq1  AGTTAAAAAAAAAAAGCAT-GGCTTTTTAGCCATCTTTAGAAAATGTGAA  949
      ||||||||||||||||||| |||||||||||||||||||||||||||| |
seq2  AGTTAAAAAAAAAAAGCATGGGCTTTTTAGCCATCTTTAGAAAATGTG-A  949

seq1  AAATGTGAAAAGATGACTTTTCTCTAAGTAAGGAAATGTGGTCAGGACTT  999
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AAATGTGAAAAGATGACTTTTCTCTAAGTAAGG-AATGTGGTCAGGACTT  998

seq1  GATTATAACAACACATTGTGACA-TTTTCTACTATTATTTTATTCATATT  1048
      ||||||||||||||| ||||||| ||||||||||||||||||||||||||
seq2  GATTATAACAACACA-TGTGACATTTTTCTACTATTATTTTATTCATATT  1047

seq1  AATAAACACCTAAATACAAGTTTT-ATAACAAAATTATACAG-AATCTTG  1096
      |||||||| ||||||||||||||| |||||||   ||||||| ||||| |
seq2  AATAAACA-CTAAATACAAGTTTTAATAACAA---TATACAGAAATCTGG  1093

seq1  GTTCCTTGGCTAGAGAAATCTTT  1119
      |   ||  ||||||| |||||||
seq2  G---CTGTGCTAGAG-AATCTTT  1112


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