MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-304C17
Chromosome	16 (Build37)
Map Location	93,114,813 - 93,235,086
singlet/doublet	doublet
Overlap gene	none
Upstream gene	Kcne2, 1190017O12Rik, 4930563D23Rik, Kcne1, Dscr1, 2410124H12Rik, Clic6, Runx1, EG666023
Downstream gene	LOC100040747, Setd4, LOC670912, Cbr1, EG435489, Cbr3, Dopey2, Morc3, Chaf1b, Cldn14, Sim2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Kcne2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:246133 MGI:1891123
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1190017O12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68936 MGI:1916186
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930563D23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75328 MGI:1922578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcne1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16509 MGI:96673
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dscr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54720 MGI:1890564
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	2410124H12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76785 MGI:1924035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Clic6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209195 MGI:2146607
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Runx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12394 MGI:99852
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666023 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666023 MGI:3648339
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100040747 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Setd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224440 MGI:2136890
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC670912 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670912
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	Cbr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12408 MGI:88284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG435489 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435489 MGI:3646098
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 8 Proteins

name	Cbr3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109857 MGI:1309992
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dopey2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70028 MGI:1917278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Morc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:338467 MGI:2136841
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chaf1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110749 MGI:1314881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cldn14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56173 MGI:1860425
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sim2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20465 MGI:98307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcne2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374181 GeneID:246133 MGI:1891123
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage-gated channel, Isk-related subfamily, gene 2 transcript_id : NM_134110.2

name	1190017O12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124358928 GeneID:68936 MGI:1916186
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1190017O12 gene transcript_id : NM_138743.2

name	4930563D23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113461978 GeneID:75328 MGI:1922578
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930563D23 gene transcript_id : NM_029252.2

name	Kcne1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227204 GeneID:16509 MGI:96673
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage-gated channel, Isk-related subfamily, member 1 transcript_id : NM_008424.3

name	Dscr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125656175 GeneID:54720 MGI:1890564
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Down syndrome critical region homolog 1 (human) transcript_id : NM_001081549.1

name	Dscr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125656174 GeneID:54720 MGI:1890564
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Down syndrome critical region homolog 1 (human) transcript_id : NM_019466.3

name	2410124H12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268205 GeneID:76785 MGI:1924035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 2410124H12 gene transcript_id : XM_001475819.1

name	Clic6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366821 GeneID:209195 MGI:2146607
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chloride intracellular channel 6 transcript_id : NM_172469.2

name	Runx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753297 GeneID:12394 MGI:99852
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : runt related transcription factor 1 transcript_id : NM_009821.1

name	EG666023 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400741 GeneID:666023 MGI:3648339
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG666023 transcript_id : XM_981017.1

name	LOC100040747 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268198 GeneID:100040747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100040747 transcript_id : XM_001475175.1

name	Setd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803504 GeneID:224440 MGI:2136890
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SET domain containing 4 transcript_id : NM_145482.2

name	LOC670912 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268200 GeneID:670912
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : hypothetical LOC670912 transcript_id : XM_001475221.1

name	Cbr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113680351 GeneID:12408 MGI:88284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbonyl reductase 1 transcript_id : NM_007620.2

name	EG435489 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400743 GeneID:435489 MGI:3646098
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 8 Proteins product : predicted gene, EG435489 transcript_id : XM_487442.3

name	Cbr3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982073 GeneID:109857 MGI:1309992
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbonyl reductase 3 transcript_id : NM_173047.2

name	Dopey2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62243807 GeneID:70028 MGI:1917278
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dopey family member 2 transcript_id : NM_027293.1

name	Dopey2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62243773 GeneID:70028 MGI:1917278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dopey family member 2 transcript_id : NM_026700.2

name	Morc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803512 GeneID:338467 MGI:2136841
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microrchidia 3 transcript_id : NM_001045529.2

name	Chaf1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385111 GeneID:110749 MGI:1314881
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chromatin assembly factor 1, subunit B (p60) transcript_id : NM_028083.2

name	Cldn14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328493 GeneID:56173 MGI:1860425
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : claudin 14 transcript_id : NM_019500.3

name	Sim2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119226236 GeneID:20465 MGI:98307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : single-minded homolog 2 (Drosophila) transcript_id : NM_011377.2

name	Kcne2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19882205 CCDS:CCDS28333.1 GeneID:246133 MGI:1891123
definition	GO_function : GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : minK-related peptide 1; minimum potassium ion channel related peptide 1 product : potassium voltage-gated channel, Isk-related subfamily, gene 2 protein_id : NP_598871.1

name	1190017O12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20270271 GeneID:68936 MGI:1916186
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : hypothetical protein LOC68936 protein_id : NP_620082.1

name	4930563D23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794180 CCDS:CCDS28335.1 GeneID:75328 MGI:1922578
definition	codon_start : 1 product : hypothetical protein LOC75328 protein_id : NP_083528.1

name	Kcne1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680528 CCDS:CCDS28336.1 GeneID:16509 MGI:96673
definition	GO_component : GO:0016324 - apical plasma membrane [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0002070 - epithelial cell maturation [Evidence IMP]; GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : potassium voltage-gated channel, Isk-related subfamily, member 1 protein_id : NP_032450.1

name	Dscr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125656176 GeneID:54720 MGI:1890564
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0019722 - calcium-mediated signaling [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; myocyte-enriched calcineurin interactin protein 1; calcineurin inhibitor; calcipressin 1 product : calcipressin 1 isoform 1 protein_id : NP_001075018.1

name	Dscr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542574 CCDS:CCDS28337.1 GeneID:54720 MGI:1890564
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0019722 - calcium-mediated signaling [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; myocyte-enriched calcineurin interactin protein 1; calcineurin inhibitor; calcipressin 1 product : calcipressin 1 isoform 2 protein_id : NP_062339.2

name	2410124H12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268206 GeneID:76785 MGI:1924035
definition	codon_start : 1 product : hypothetical protein LOC76785 protein_id : XP_001475869.1

name	Clic6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369633 CCDS:CCDS28338.1 GeneID:209195 MGI:2146607
definition	GO_function : GO:0005254 - chloride channel activity [Evidence IEA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : chloride intracellular channel 6 protein_id : NP_766057.1

name	Runx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753298 CCDS:CCDS28339.1 GeneID:12394 MGI:99852
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0016563 - transcriptional activator activity [Evidence ISS] GO_process : GO:0048266 - behavioral response to pain [Evidence IMP]; GO:0030097 - hemopoiesis [Evidence TAS]; GO:0048666 - neuron development [Evidence IMP]; GO:0030182 - neuron differentiation [Evidence IMP]; GO:0045766 - positive regulation of angiogenesis [Evidence IMP]; GO:0030854 - positive regulation of granulocyte differentiation [Evidence ISS]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0001501 - skeletal development [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation function : transcription factor note : core binding factor alpha 2; runt domain, alpha subunit 2 product : runt related transcription factor 1 protein_id : NP_033951.1

name	EG666023 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94400742 GeneID:666023 MGI:3648339
definition	codon_start : 1 product : hypothetical protein protein_id : XP_986111.1

name	LOC100040747 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268199 GeneID:100040747
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475225.1

name	Setd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703952 CCDS:CCDS28340.1 GeneID:224440 MGI:2136890
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 exception : mismatches in translation product : SET domain containing 4 protein_id : NP_663457.1

name	LOC670912 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268201 GeneID:670912
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475271.1

name	Cbr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113680352 CCDS:CCDS28341.1 GeneID:12408 MGI:88284
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004090 - carbonyl reductase (NADPH) activity [Evidence TAS]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : carbonyl reductase 1 protein_id : NP_031646.2

name	EG435489 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51830180 GeneID:435489 MGI:3646098
definition	codon_start : 1 product : similar to Carbonyl reductase 1 protein_id : XP_487442.1

name	Cbr3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27413160 CCDS:CCDS28342.1 GeneID:109857 MGI:1309992
definition	codon_start : 1 product : carbonyl reductase 3 protein_id : NP_766635.1

name	Dopey2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62243808 CCDS:CCDS28343.1 GeneID:70028 MGI:1917278
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : pad-1-like isoform 1 protein_id : NP_081569.1

name	Dopey2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15022807 GeneID:70028 MGI:1917278
definition	codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : pad-1-like isoform 2 protein_id : NP_080976.1

name	Morc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113865911 GeneID:338467 MGI:2136841
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : zinc finger, CW-type with coiled-coil domain 3 product : microrchidia 3 protein_id : NP_001038994.1

name	Chaf1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312470 CCDS:CCDS28344.1 GeneID:110749 MGI:1314881
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : CAF-1 subunit B; CAF-I 60 kDa subunit product : chromatin assembly factor 1 subunit B protein_id : NP_082359.1

name	Cldn14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328494 CCDS:CCDS28345.1 GeneID:56173 MGI:1860425
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence ISS] [Evidence IEA] GO_function : GO:0042802 - identical protein binding [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence ISS] codon_start : 1 product : claudin 14 protein_id : NP_062373.3

name	Sim2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119226237 GeneID:20465 MGI:98307
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046982 - protein heterodimerization activity [Evidence IPI]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA]; GO:0000155 - two-component sensor activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0009880 - embryonic pattern specification [Evidence IMP]; GO:0030324 - lung development [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0007399 - nervous system development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA] codon_start : 1 note : single-minded 2 product : single-minded homolog 2 protein_id : NP_035507.2

clone name	MSMg01-388H22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-266F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382G16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-291M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158J16
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-304C17.b	B6Ng01-304C17.g
ACC	GA097791	GA097792
length	1,163	981
definition	B6Ng01-304C17.b	B6Ng01-304C17.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(93,233,925 - 93,235,086)	(93,114,813 - 93,115,790)
sequence	gaattcaataatgggcatctttagtgaaagcagtgggtttgtatttatga catgctctgtgctggttctgaaggggccatgttggaagacactgcctcca tacatgagagccaattctgcagtagggccggccaggacaggggtaacctt atactgctgggttctctgttgaggggcatgtcccctggacacctaggcga aacagcacctcttctctgggcctctctgccagcctcattctattgcgttg ccaacagcttatgttggaggttagtgctgaggggacttgcagaagtcaag cggccacagagggaacatcctatgggccttgctatctaggacactattct taatcaggacgtctttactgggggaaatccatgccttcaggatgtgatca gagagacaatttagggataaagatatttaatggccgtggctagagcgtag tgaagacgataattacatgtaatttggggggagttttggatacgtcaatg ctaccaagttgcactgctctagggcctctgttggggtcaaacatgggctt cccatctctgttttcccttctgctacttggagaagttctggaaagatctc agagtttttaatcctcatgttctgtggttcttttttttaagagtttagtt acaggcatttttttttaacctcaaaatttcttttctaacttaaacagact actttttagtaagtaattatttaaatcagccaagcatgggacttggcata cgagcacaagatgactgatttcaattttgacttccacctctcgattactg tgctgttggtccaaggtgttccttcggcaggtcatgcaaatgtgatgatg ttgtgtgttacagctagagttactactgctgtggcaaacccatgaccaaa agcaacgtgggtaggagagagtttgcttcagattaccacttccacagcac atctgcccctgaaggaagtgaggtttctcttctgaaactttgagacaaca gaaaattttcagttgtgtgtcgtgtgacaaacccaaccaaggacatgttg cctgtcaaatttccatgtccaccttgacatgctaagagcatcataatgtt aaacgccccttatattgaccgacctgtgtgagttaagggagaagagacat ggattcctaatga	gaattccctgtcatgaggatcattatcattattgatcaacaaagaagaat acctaacttttgaattgttaatgttttcattctgtaggaaatcgttttgt tggattgtgagacaaaggattttggaacgttttgctgtaggctggtctag attcacagtgtggaaacttgagagaaggttctggtatagcaaaaggacct gagctcacgcagagaccctccagtctgactcttgcctcacaccggttaac tttgcatcattcccaagcatggggacatgcaaagctggttcatcagtcct ttgctgctaaaactcttgtgctgatgtcccctggactccctctcagctct tgggtacacgtgagccaagtggacattccaacctttgtaaattttctcct cgaagaaaatgatgctatgacagcaagattgaagatatcagagagtagca gctgacctttctaggttcctatatcctaggtacccatgatcaggtaatag tcatagagactctcattaaaaatagaattgggggtgtcctaggagctgga gccacctctaaagtgctgggacaagaggctctggcatctcttcaggtcat ttatgtaacactcaccttctctgacttttctgtatcatgggcttccccta gcatgttctgtttgttccttgcagcccaaatggagaaggttcctgctctg ggtctgtttcctgagctggattctttcatgggttagttgaaatgttaatt tctctgtagcccccactgttctgcatcgaataaaggaaaccatcgccacc aacaatgaaaagcactgaagtattcataaagattgattgtttcatttaat tacctacaacttttttctaagactacctttgtgtgtgtgtgtaagtgtgc ggggggagtgaggcacacatgtgtgtgggatgtgtgcgtatatgtattgt tgcaagtggtgttgttatgaatgtgtatgac
quality values	Open. Hide. 46 31 23 20 62 38 22 62 62 62 56 47 62 62 49 62 56 47 62 62 62 54 62 62 62 62 59 62 62 59 62 30 23 24 28 25 28 34 56 32 28 36 28 27 32 46 51 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 42 62 62 62 51 56 43 34 42 33 56 62 54 54 62 59 59 59 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 42 42 54 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 42 49 54 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 54 62 62 62 62 62 62 62 62 54 62 49 62 62 62 62 62 62 62 62 47 62 62 62 62 62 54 51 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 47 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 58 58 58 58 58 52 52 58 58 52 58 54 58 58 58 58 58 58 58 58 49 58 54 54 58 58 58 54 58 58 49 58 58 58 58 58 58 54 52 58 58 58 58 58 58 54 58 58 58 54 58 58 58 58 52 58 58 58 54 52 54 58 58 58 54 54 19 54 58 50 58 51 48 58 58 58 58 58 58 47 51 50 51 58 51 50 30 58 46 58 58 58 58 51 46 53 52 51 58 41 45 52 47 58 58 49 53 58 51 40 58 48 50 51 53 52 58 58 58 58 58 58 49 50 53 50 58 34 58 58 49 41 40 54 51 31 46 34 39 58 50 32 53 58 58 58 58 58 58 58 54 26 46 42 39 41 47 51 58 58 40 50 58 53 53 53 58 58 49 42 49 32 52 50 58 51 34 50 52 54 51 38 58 50 50 32 50 49 39 36 36 44 42 39 40 40 41 38 49 37 40 49 45 32 35 54 44 38 54 51 53 45 32 25 41 53 41 47 35 42 22 52 52 54 51 27 40 52 46 47 40 40 23 45 32 39 24 30 21 53 32 42 33 37 42 37 31 37 33 32 37 35 21 17 54 36 37 35 32 32 49 49 53 32 30 36 20 38 28 39 37 32 42 42 32 32 45 33 41 28 31 29 40 39 53 34 45 52 32 34 21 25 31 51 27 31 45 23 33 25 51 26 38 20 30 29 27 33 31 32 24 30 28 30 25 28 28 33 35 36 39 31 29 46 27 31 42 31 33 23 15 31 34 26 41 31 30 37 28 41 26 27 18 42 36 31 31 29 43 31 24 31 31 32 19 9 14 32 31 31 31 27 38 32 43 34 32 25 29 26 46 38 38 17 41 24 21 30 31 31 15 18 20 38 32 31 33 42 19 30 22 20 31 30 44 31 27 34 18 24 31 24 35 9 26 16 16 48 37 28 32 30 33 33 21 6 14 18 12 27 24 7 7 11 8 38 20 9 4 4 10 19 29 16 9 10 10 21 32 34 20 22 31 26 17 16 19 17 26 17 17 23 22 32 31 25 9 31 16 37 7 6 6 13 33 18 12 11 11 20 47 11 19 19 29 27 23 19 6 9 6 4 7 4 5 13 26 34 31 14 11 30 28 24 26 7 7 6 5 6 9 7 8 14 14 24 7 5 3 3 4 16 3 3 17 22 25 28 16 15 15 6 10 28 25 6 9 16 6 6 13 12 7 4 6 10 7 16 7 6 11 16 28 14 11 28 22 9 15 16 16 23 10 12 5 11 7 16 16 14 11 9 10 6 3 4 9 13 8 8 8 11 9 8 7 8 2 3 9 3 2 1 3 3 3 6 21 5 16 7 5 28 25 10 5 6 7 5 8 8 4 13 13 9 9 5 11 14 13 16 5 5 6 5 8 17 10 5 17 6 9 15 9 4 6 4 5 1 6 21 7 6 4 8 1 5 3 2 3 5 10 9 1 20 15 5 8 8	Open. Hide. 62 47 37 39 62 62 62 62 62 62 11 13 12 10 14 17 11 28 21 18 19 17 21 19 18 24 39 46 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 50 40 49 43 38 36 38 46 50 48 48 54 36 40 43 50 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 54 54 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 54 62 62 59 62 62 62 62 62 62 62 62 62 62 59 54 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 51 45 43 50 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 54 62 62 62 62 62 62 47 49 62 56 38 19 10 30 14 51 62 62 62 62 62 62 62 62 62 62 62 36 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 45 62 62 62 62 62 62 62 58 58 58 58 58 54 58 54 58 41 38 58 58 58 58 58 58 54 58 54 54 47 52 54 52 58 54 33 47 58 58 58 58 52 40 52 33 45 54 58 58 58 58 58 58 54 54 58 52 58 58 58 39 36 34 22 27 25 41 19 49 47 58 52 58 43 33 41 47 58 52 58 51 58 48 50 52 41 58 46 49 49 58 58 47 58 42 58 51 38 58 47 53 54 58 46 50 54 58 58 58 50 51 41 46 58 37 34 58 58 58 41 50 54 58 50 40 40 48 50 48 58 58 48 51 58 48 46 58 49 49 54 52 27 49 50 50 54 51 46 49 54 58 35 58 58 44 23 27 49 46 50 58 39 50 52 31 41 41 44 37 49 23 31 49 40 43 31 53 50 13 35 25 40 49 51 50 58 50 54 53 52 54 49 49 39 53 51 54 34 54 35 42 46 44 49 53 19 51 38 54 51 38 37 49 39 39 36 39 32 30 35 49 54 33 20 26 31 20 53 47 37 51 54 36 36 49 34 26 17 31 41 49 53 40 39 33 33 52 42 53 23 41 42 42 47 41 40 38 31 47 32 19 39 45 34 31 28 34 38 31 29 33 22 23 46 26 21 32 28 32 35 26 40 29 42 32 25 40 40 13 40 40 9 22 33 25 26 39 43 31 51 51 31 29 31 31 30 42 38 33 31 31 39 20 23 33 33 23 37 23 51 24 32 30 20 31 42 30 15 21 42 25 48 30 31 26 31 48 46 15 27 26 44 36 29 16 27 31 32 13 29 31 31 48 46 46 46 37 30 26 23 20 14 31 31 38 30 31 27 36 48 46 32 26 32 31 31 31 32 32 29 29 23 27 24 37 27 37 29 25 31 31 30 44 44 44 41 33 25 26 37 31 29 17 31 15 19 31 31 31 24 30 21 19 17 16 31 26 38 47 32 22 9 24 26 26 17 11 27 32 18 8 13 8 15 24 14 8 11 7 11 33 10 32 34 28 26 14 11 10 6 13 19 9 11 22 7 7 7 10 12 21 25 8 18 22 31 29 11 23 17 10 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr16_93233925_93235086
seq2: B6Ng01-304C17.b_45_1207 (reverse)

seq1  TCATTAGG-ATCCTTGTCTCTTCTCTCCTCTACT--CACAGGTCGTTCCA  47
      |||||||| |||| ||||||||||| |||  |||  ||||||||| || |
seq2  TCATTAGGAATCCATGTCTCTTCTC-CCTTAACTCACACAGGTCGGTCAA  49

seq1  TAT-AGGGGCGTTAAACCTATTAATGAATGCTC-TAGCATGTCAA-GTTG  94
      ||| ||||||||| |||  ||| ||| |||||| ||||||||||| || |
seq2  TATAAGGGGCGTTTAAC--ATT-ATG-ATGCTCTTAGCATGTCAAGGTGG  95

seq1  ACAT-GAAATTTGACAG--CACATGTCTTTGTTGGGTTTTGTCACCACGA  141
      |||| ||||||||||||   ||||||| ||| | || ||||||| |||||
seq2  ACATGGAAATTTGACAGGCAACATGTCCTTGGTTGGGTTTGTCA-CACGA  144

seq1  CACACACCTGAAAATTTTCTGTTTGTCTCAAAGTTTCAGAAGAGAAACCT  191
      |||||| |||||||||||||| ||||||||||||||||||||||||||||
seq2  CACACAACTGAAAATTTTCTG-TTGTCTCAAAGTTTCAGAAGAGAAACCT  193

seq1  CACTTCCTTCAGGGGCAGATTGTGCTGTGGAAGT-GTAATCTGAAGCAAA  240
      ||||||||||||||||||| |||||||||||||| |||||||||||||||
seq2  CACTTCCTTCAGGGGCAGA-TGTGCTGTGGAAGTGGTAATCTGAAGCAAA  242

seq1  CTCTCTCCTACCCACGTTGCTTTTGGTCATGGGTTTTGCCACAGCAGTAG  290
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTCTCTCCTACCCACGTTGCTTTTGGTCATGGG-TTTGCCACAGCAGTAG  291

seq1  TAACTCTAGCTGTAACACACAACATCATCACATTTGCATGACCTGCCGAA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCTAGCTGTAACACACAACATCATCACATTTGCATGACCTGCCGAA  341

seq1  GGAACACCTTGGACCAACAGCACAGTAATCGAGAGGTGGAAGTCAAAATT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACACCTTGGACCAACAGCACAGTAATCGAGAGGTGGAAGTCAAAATT  391

seq1  GAAATCAGTCATCTTGTGCTCGTATGCCAAGTCCCATGCTTGGCTGATTT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCAGTCATCTTGTGCTCGTATGCCAAGTCCCATGCTTGGCTGATTT  441

seq1  AAATAATTACTTACTAAAAAGTAGTCTGTTTAAGTTAGAAAAGAAATTTT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATTACTTACTAAAAAGTAGTCTGTTTAAGTTAGAAAAGAAATTTT  491

seq1  GAGGTTAAAAAAAAATGCCTGTAACTAAACTCTTAAAAAAAAGAACCACA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTAAAAAAAAATGCCTGTAACTAAACTCTTAAAAAAAAGAACCACA  541

seq1  GAACATGAGGATTAAAAACTCTGAGATCTTTCCAGAACTTCTCCAAGTAG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGAGGATTAAAAACTCTGAGATCTTTCCAGAACTTCTCCAAGTAG  591

seq1  CAGAAGGGAAAACAGAGATGGGAAGCCCATGTTTGACCCCAACAGAGGCC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGGAAAACAGAGATGGGAAGCCCATGTTTGACCCCAACAGAGGCC  641

seq1  CTAGAGCAGTGCAACTTGGTAGCATTGACGTATCCAAAACTCCCCCCAAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGCAGTGCAACTTGGTAGCATTGACGTATCCAAAACTCCCCCCAAA  691

seq1  TTACATGTAATTATCGTCTTCACTACGCTCTAGCCACGGCCATTAAATAT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGTAATTATCGTCTTCACTACGCTCTAGCCACGGCCATTAAATAT  741

seq1  CTTTATCCCTAAATTGTCTCTCTGATCACATCCTGAAGGCATGGATTTCC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCCCTAAATTGTCTCTCTGATCACATCCTGAAGGCATGGATTTCC  791

seq1  CCCAGTAAAGACGTCCTGATTAAGAATAGTGTCCTAGATAGCAAGGCCCA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTAAAGACGTCCTGATTAAGAATAGTGTCCTAGATAGCAAGGCCCA  841

seq1  TAGGATGTTCCCTCTGTGGCCGCTTGACTTCTGCAAGTCCCCTCAGCACT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATGTTCCCTCTGTGGCCGCTTGACTTCTGCAAGTCCCCTCAGCACT  891

seq1  AACCTCCAACATAAGCTGTTGGCAACGCAATAGAATGAGGCTGGCAGAGA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCCAACATAAGCTGTTGGCAACGCAATAGAATGAGGCTGGCAGAGA  941

seq1  GGCCCAGAGAAGAGGTGCTGTTTCGCCTAGGTGTCCAGGGGACATGCCCC  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAGAGAAGAGGTGCTGTTTCGCCTAGGTGTCCAGGGGACATGCCCC  991

seq1  TCAACAGAGAACCCAGCAGTATAAGGTTACCCCTGTCCTGGCCGGCCCTA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAGAGAACCCAGCAGTATAAGGTTACCCCTGTCCTGGCCGGCCCTA  1041

seq1  CTGCAGAATTGGCTCTCATGTATGGAGGCAGTGTCTTCCAACATGGCCCC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGAATTGGCTCTCATGTATGGAGGCAGTGTCTTCCAACATGGCCCC  1091

seq1  TTCAGAACCAGCACAGAGCATGTCATAAATACAAACCCACTGCTTTCACT  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAACCAGCACAGAGCATGTCATAAATACAAACCCACTGCTTTCACT  1141

seq1  AAAGATGCCCATTATTGAATTC  1162
      ||||||||||||||||||||||
seq2  AAAGATGCCCATTATTGAATTC  1163

seq1: chr16_93114813_93115790
seq2: B6Ng01-304C17.g_68_1048

seq1  GAATTCCCTGTCATGAGGATCATTATCATTATTGATCAACAAAGAAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGTCATGAGGATCATTATCATTATTGATCAACAAAGAAGAAT  50

seq1  ACCTAACTTTTGAATTGTTAATGTTTTCATTCTGTAGGAAATCGTTTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAACTTTTGAATTGTTAATGTTTTCATTCTGTAGGAAATCGTTTTGT  100

seq1  TGGATTGTGAGACAAAGGATTTTGGAACGTTTTGCTGTAGGCTGGTCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTGTGAGACAAAGGATTTTGGAACGTTTTGCTGTAGGCTGGTCTAG  150

seq1  ATTCACAGTGTGGAAACTTGAGAGAAGGTTCTGGTATAGCAAAAGGACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACAGTGTGGAAACTTGAGAGAAGGTTCTGGTATAGCAAAAGGACCT  200

seq1  GAGCTCACGCAGAGACCCTCCAGTCTGACTCTTGCCTCACACCGGTTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCACGCAGAGACCCTCCAGTCTGACTCTTGCCTCACACCGGTTAAC  250

seq1  TTTGCATCATTCCCAAGCATGGGGACATGCAAAGCTGGTTCATCAGTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATCATTCCCAAGCATGGGGACATGCAAAGCTGGTTCATCAGTCCT  300

seq1  TTGCTGCTAAAACTCTTGTGCTGATGTCCCCTGGACTCCCTCTCAGCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCTAAAACTCTTGTGCTGATGTCCCCTGGACTCCCTCTCAGCTCT  350

seq1  TGGGTACACGTGAGCCAAGTGGACATTCCAACCTTTGTAAATTTTCTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTACACGTGAGCCAAGTGGACATTCCAACCTTTGTAAATTTTCTCCT  400

seq1  CGAAGAAAATGATGCTATGACAGCAAGATTGAAGATATCAGAGAGTAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGAAAATGATGCTATGACAGCAAGATTGAAGATATCAGAGAGTAGCA  450

seq1  GCTGACCTTTCTAGGTTCCTATATCCTAGGTACCCATGATCAGGTAATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACCTTTCTAGGTTCCTATATCCTAGGTACCCATGATCAGGTAATAG  500

seq1  TCATAGAGACTCTCATTAAAAATAGAATTGGGGGTGTCCTAGGAGCTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGAGACTCTCATTAAAAATAGAATTGGGGGTGTCCTAGGAGCTGGA  550

seq1  GCCACCTCTAAAGTGCTGGGACAAGAGGCTCTGGCATCTCTTCAGGTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCTCTAAAGTGCTGGGACAAGAGGCTCTGGCATCTCTTCAGGTCAT  600

seq1  TTATGTAACACTCACCTTCTCTGACTTTTCTGTATCATGGGCTTCCCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAACACTCACCTTCTCTGACTTTTCTGTATCATGGGCTTCCCCTA  650

seq1  GCATGTTCTGTTTGTTCCTTGCAGCCCAAATGGAGAAGGTTCCTGCTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTTCTGTTTGTTCCTTGCAGCCCAAATGGAGAAGGTTCCTGCTCTG  700

seq1  GGTCTGTTTCCTGAGCTGGATTCTTTCATGGGTTAGTTGAAATGTTAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTTTCCTGAGCTGGATTCTTTCATGGGTTAGTTGAAATGTTAATT  750

seq1  TCTCTGTAGCCCCCACTGTTCTGCATCGAATAAAGGAAACCATCGCCACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTAGCCCCCACTGTTCTGCATCGAATAAAGGAAACCATCGCCACC  800

seq1  AACAATGAAAAGCACTGAAGTATTCATAAAGATTGATTGTTTCATTTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGAAAAGCACTGAAGTATTCATAAAGATTGATTGTTTCATTTAAT  850

seq1  TACCTACAACTTTTTTCTAAAGACTACCTTTGTGTGTGTGTGTAAGTGTG  900
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TACCTACAACTTTTTTCT-AAGACTACCTTTGTGTGTGTGTGTAAGTGTG  899

seq1  CGGGGGGAGTGAGGCACACATGTGTGTGGGATGTGTGCGTATATGTA-TG  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CGGGGGGAGTGAGGCACACATGTGTGTGGGATGTGTGCGTATATGTATTG  949

seq1  TTGCAAGT-GTGT--GTATGAATGTGTATGAC  978
      |||||||| ||||   ||||||||||||||||
seq2  TTGCAAGTGGTGTTGTTATGAATGTGTATGAC  981

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information