BAC Information

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BAC

Clone NameB6Ng01-305B18
Chromosome16 (Build37)
Map Location 32,254,857 - 32,390,659
singlet/doubletdoublet
Overlap geneWdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7
Upstream genePpp1r2, Apod, 1700007E05Rik, Bdh1, Gm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2, Pigx, 1500031L02Rik, Lrrc33, Bex6, Fbxo45
Downstream geneTm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg, Rpl35a, Lmln, LOC638791, Osbpl11, Snx4, Zfp148
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305B18.bB6Ng01-305B18.g
ACCGA098483GA098484
length1,152961
definitionB6Ng01-305B18.b B6Ng01-305B18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,389,496 - 32,390,659)(32,254,857 - 32,255,815)
sequence
gaattctccttaggaagaaatgagttgtaaaaacggtgtttgcctcaaaa
tattctcttctatattaatttataaaaatgagaaatatacattaaggctt
agaaatataattttaaaagcatagctaagtgtcttaaatttcatgaccaa
ttttagaggaattaagtaaagaatgaagaagagacaggcatgtggctcac
tttaacccaaggaggacccagaggttcaaggttatgttcaactaactaca
cagtcactgaagaggtcagcctgatccaggacaaccaggactagataaag
aaaacttatctcaaagaaaaaaaaaaaaaaaagagaggagaggttagcct
gaactatgtaagaacgtttgaaaacaaaataaaagacactcccaccccca
aatggataaaggattaaactgatgttctacttcaggtttcatcatatcca
ataatctagccacctgagttccttaataaagaaactaaccagccaggtgt
ggtggcacagacctctagtcacagcacttggcaggcagatctctatgagt
ttgaggtcagcctgcctggtccacaaagcgagcccaggacagccagggtt
attacatagagaaaccctgtctctaaaaacaaaacaaacaaaacttgacc
aaagctatgataacctctgttcttaaataagccaaatacctttaattcta
agctgtctcattatgagaactgacgcaaaggtgagtttaaaatccaaatg
atcaccactgaagcatttaaatctctgtgttatacaagaaatcaatatat
tagaatggtactctttggttattctgagctctgaagaacattttttgccc
cactctaatgtggactagggactcttaagtttcacagtaaagaacccgaa
atgttctgtaaaggcaaaccagtggcgctggaattggcttcctgctcaca
ggggccttttaggtgtctgttcaagggctgggagtactcgggagcagagt
gattgccttagagcagcctactctgacgtttaagctgcgggagtgtgagc
ctcacagggctgctctcttaccctcaatactttcaagttagttttaacac
aggcaatactcatatttgtaacttgaacttacatcagtacattaattgaa
gg
gaattcaaaaccagtctggtctatatagtaagaccttgcctcaaaaaaat
aatctttaaagcgggcgtggtggcacacacctttaatctcagcactcagg
aggcagaggcaggcagatttctgaattcgaggccagcctggtctacagag
tgagttccaggacagccaggggaatacagagaaaccctgtctcgaaaaac
caaaaaaaaaaaaacaacaacaacaacaaaaaaacttcaaaaaaaatagg
catgcagaatttggcattttgcctccacttctgtgtgaagccctctaggg
gcatgtagctgctggagagtgttccccagcatttggtagagaggcagggt
attcttatttcctggaaagtttcactgtacttcagaaaatgcgcttgaat
tcctgcctctgtttcccaaaatctgggtttgctgggttgtacaactatac
atataccccacatacacacgtgtgcgcatacaaagatttctgatatatta
aaaaagagtctaggagccgggcagtggtggcacacgcctttaatcccagc
acttgggaggcagagtcaggcggatttctgagttcgaggccagcctggtc
tacaaagtgagttccaggacagccagggctacacagaggaaccctgtctc
gaaaaaaaataaataaataaaaattaaaaatcttaaggaaagaaaaaaca
cccactccccactggtattccctggccccagataaagaagaaagagtcta
agctaggcatggtggtacgtgcttctggtcctaacactgaacaaacaggc
agaaagggtcaccataagttcaaagctagcttgctctacctagtgagacc
tggtttgaaacaaaccaagaatttctttggcagtcaaatatgaaataatt
ttttaaagatttcctgtttttctgttgttgtaattgggtttttttgttta
gttggggtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32389496_32390659
seq2: B6Ng01-305B18.b_43_1194 (reverse)

seq1  CCTTC-ATTTATGTACTTGATAGTAAGTTTCAGAGTACAAAATTATGAGT  49
      ||||| ||| |||||| |||| ||||| ||||   ||||||  |||||||
seq2  CCTTCAATTAATGTAC-TGAT-GTAAG-TTCAAGTTACAAA--TATGAGT  45

seq1  AATGCCTTGTG-TAAAACTAAAACTTGAAAAGTAATGAGGGTAGGAAGAG  98
      | |||| |||| |||||||  |||||| |||||| |||||||| | ||||
seq2  ATTGCC-TGTGTTAAAACT--AACTTG-AAAGTATTGAGGGTAAG-AGAG  90

seq1  CCAGCCCTGTGAGGGCTCACACTTCCCCGGCAGCTTAAACCGTCAGGAGT  148
       ||||||||||| ||||||||||   || |||||||||| ||||| ||||
seq2  -CAGCCCTGTGA-GGCTCACACT---CCCGCAGCTTAAA-CGTCA-GAGT  133

seq1  AGGCTGCTTCTAGGCAATCACTCTGCCTCCCGAGTTACTCCCAGCCCCTG  198
      ||||||||   |||||||||||||| |||||||| |||||||||||| ||
seq2  AGGCTGCTCTAAGGCAATCACTCTG-CTCCCGAG-TACTCCCAGCCCTTG  181

seq1  AACAGACACCTAAA--GGCCCTGTGAGCAGGGAGCCAATTCCAGCGCCAC  246
      ||||||||||||||  | ||||||||||||| ||||||||||||||||||
seq2  AACAGACACCTAAAAGGCCCCTGTGAGCAGGAAGCCAATTCCAGCGCCAC  231

seq1  TGGTTTGCC-TTACAGAACATTTC-GGTTCTTTACTGTGAAACTTAAGAG  294
      ||||||||| |||||||||||||| |||||||||||||||||||||||||
seq2  TGGTTTGCCTTTACAGAACATTTCGGGTTCTTTACTGTGAAACTTAAGAG  281

seq1  TCCCTAGTCCACATTAGAGTGGGGC-AAAAATGTTCTTCAGAGCTCAGAA  343
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCCCTAGTCCACATTAGAGTGGGGCAAAAAATGTTCTTCAGAGCTCAGAA  331

seq1  TAACCAAAGAGTACCATTCTAATATATTGATTTCTTGTATAACACAGAGA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAAAGAGTACCATTCTAATATATTGATTTCTTGTATAACACAGAGA  381

seq1  TTTAAATGCTTCAGTGGTGATCATTTGGATTTTAAACTCACCTTTGCGTC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATGCTTCAGTGGTGATCATTTGGATTTTAAACTCACCTTTGCGTC  431

seq1  AGTTCTCATAATGAGACAGCTTAGAATTAAAGGTATTTGGCTTATTTAAG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCATAATGAGACAGCTTAGAATTAAAGGTATTTGGCTTATTTAAG  481

seq1  AACAGAGGTTATCATAGCTTTGGTCAAGTTTTGTTTGTTTTGTTTTTAGA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGGTTATCATAGCTTTGGTCAAGTTTTGTTTGTTTTGTTTTTAGA  531

seq1  GACAGGGTTTCTCTATGTAATAACCCTGGCTGTCCTGGGCTCGCTTTGTG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGTTTCTCTATGTAATAACCCTGGCTGTCCTGGGCTCGCTTTGTG  581

seq1  GACCAGGCAGGCTGACCTCAAACTCATAGAGATCTGCCTGCCAAGTGCTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGCAGGCTGACCTCAAACTCATAGAGATCTGCCTGCCAAGTGCTG  631

seq1  TGACTAGAGGTCTGTGCCACCACACCTGGCTGGTTAGTTTCTTTATTAAG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAGAGGTCTGTGCCACCACACCTGGCTGGTTAGTTTCTTTATTAAG  681

seq1  GAACTCAGGTGGCTAGATTATTGGATATGATGAAACCTGAAGTAGAACAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGGTGGCTAGATTATTGGATATGATGAAACCTGAAGTAGAACAT  731

seq1  CAGTTTAATCCTTTATCCATTTGGGGGTGGGAGTGTCTTTTATTTTGTTT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTAATCCTTTATCCATTTGGGGGTGGGAGTGTCTTTTATTTTGTTT  781

seq1  TCAAACGTTCTTACATAGTTCAGGCTAACCTCTCCTCTCTTTTTTTTTTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACGTTCTTACATAGTTCAGGCTAACCTCTCCTCTCTTTTTTTTTTT  831

seq1  TTTTTCTTTGAGATAAGTTTTCTTTATCTAGTCCTGGTTGTCCTGGATCA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTGAGATAAGTTTTCTTTATCTAGTCCTGGTTGTCCTGGATCA  881

seq1  GGCTGACCTCTTCAGTGACTGTGTAGTTAGTTGAACATAACCTTGAACCT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGACCTCTTCAGTGACTGTGTAGTTAGTTGAACATAACCTTGAACCT  931

seq1  CTGGGTCCTCCTTGGGTTAAAGTGAGCCACATGCCTGTCTCTTCTTCATT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTCCTCCTTGGGTTAAAGTGAGCCACATGCCTGTCTCTTCTTCATT  981

seq1  CTTTACTTAATTCCTCTAAAATTGGTCATGAAATTTAAGACACTTAGCTA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTTAATTCCTCTAAAATTGGTCATGAAATTTAAGACACTTAGCTA  1031

seq1  TGCTTTTAAAATTATATTTCTAAGCCTTAATGTATATTTCTCATTTTTAT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTAAAATTATATTTCTAAGCCTTAATGTATATTTCTCATTTTTAT  1081

seq1  AAATTAATATAGAAGAGAATATTTTGAGGCAAACACCGTTTTTACAACTC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAATATAGAAGAGAATATTTTGAGGCAAACACCGTTTTTACAACTC  1131

seq1  ATTTCTTCCTAAGGAGAATTC  1164
      |||||||||||||||||||||
seq2  ATTTCTTCCTAAGGAGAATTC  1152

seq1: chr16_32254857_32255815
seq2: B6Ng01-305B18.g_68_1028

seq1  GAATTCAAAACCAGTCTGGTCTATATAGTAAGACCTTGCCTCAAAAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAACCAGTCTGGTCTATATAGTAAGACCTTGCCTCAAAAAAAT  50

seq1  AATCTTTAAAGCGGGCGTGGTGGCACACACCTTTAATCTCAGCACTCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTAAAGCGGGCGTGGTGGCACACACCTTTAATCTCAGCACTCAGG  100

seq1  AGGCAGAGGCAGGCAGATTTCTGAATTCGAGGCCAGCCTGGTCTACAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAGGCAGGCAGATTTCTGAATTCGAGGCCAGCCTGGTCTACAGAG  150

seq1  TGAGTTCCAGGACAGCCAGGGGAATACAGAGAAACCCTGTCTCGAAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCCAGGACAGCCAGGGGAATACAGAGAAACCCTGTCTCGAAAAAC  200

seq1  CAAAAAAAAAAAAACAACAACAACAACAAAAAAACTTCAAAAAAAATAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAAAAAAACAACAACAACAACAAAAAAACTTCAAAAAAAATAGG  250

seq1  CATGCAGAATTTGGCATTTTGCCTCCACTTCTGTGTGAAGCCCTCTAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGAATTTGGCATTTTGCCTCCACTTCTGTGTGAAGCCCTCTAGGG  300

seq1  GCATGTAGCTGCTGGAGAGTGTTCCCCAGCATTTGGTAGAGAGGCAGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTAGCTGCTGGAGAGTGTTCCCCAGCATTTGGTAGAGAGGCAGGGT  350

seq1  ATTCTTATTTCCTGGAAAGTTTCACTGTACTTCAGAAAATGCGCTTGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTATTTCCTGGAAAGTTTCACTGTACTTCAGAAAATGCGCTTGAAT  400

seq1  TCCTGCCTCTGTTTCCCAAAATCTGGGTTTGCTGGGTTGTACAACTATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCCTCTGTTTCCCAAAATCTGGGTTTGCTGGGTTGTACAACTATAC  450

seq1  ATATACCCCACATACACACGTGTGCGCATACAAAGATTTCTGATATATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACCCCACATACACACGTGTGCGCATACAAAGATTTCTGATATATTA  500

seq1  AAAAAGAGTCTAGGAGCCGGGCAGTGGTGGCACACGCCTTTAATCCCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAGTCTAGGAGCCGGGCAGTGGTGGCACACGCCTTTAATCCCAGC  550

seq1  ACTTGGGAGGCAGAGTCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGGAGGCAGAGTCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTC  600

seq1  TACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGGAACCCTGTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGGAACCCTGTCTC  650

seq1  GAAAAAAAATAAATAAATAAAAATTAAAAATCTTAAGGAAAGAAAAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAATAAATAAATAAAAATTAAAAATCTTAAGGAAAGAAAAAACA  700

seq1  CCCACTCCCCACTGGTATTCCCTGGCCCCAGATAAAGAAGAAAGAGTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCCCCACTGGTATTCCCTGGCCCCAGATAAAGAAGAAAGAGTCTA  750

seq1  AGCTAGGCATGGTGGTACGTGCTTCTGGTCCTAACACTGAACAAACAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGGCATGGTGGTACGTGCTTCTGGTCCTAACACTGAACAAACAGGC  800

seq1  AG-AAGGGTCACCATAAGTTCAAAGCTAGCTTGCTCTACCTAGTGAGACC  849
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGGTCACCATAAGTTCAAAGCTAGCTTGCTCTACCTAGTGAGACC  850

seq1  TGGTTTGAAACAAACCAAGAATTTCTTTGGCAAGTCAAATATGAAATATT  899
      ||||||||||||||||||||||||||||||| |||||||||||||||| |
seq2  TGGTTTGAAACAAACCAAGAATTTCTTTGGC-AGTCAAATATGAAATAAT  899

seq1  TTTTTAAAGATTT-CTGTTTTTCTGTTGTTGT-ATTTGGTTTTTTTGTTT  947
      ||||||||||||| |||||||||||||||||| ||| |||||||||||||
seq2  TTTTTAAAGATTTCCTGTTTTTCTGTTGTTGTAATTGGGTTTTTTTGTTT  949

seq1  AGTTGGTGTGTG  959
      |||||| |||||
seq2  AGTTGGGGTGTG  961