MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-305I12
Chromosome	16 (Build37)
Map Location	39,680,101 - 39,681,186
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Cdgap, B4galt4, LOC100043289, Upk1b, 4930435E12Rik, Igsf11
Downstream gene	LOC667400
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cdgap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12549 MGI:1333857
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B4galt4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56375 MGI:1928387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043289 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043289
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Upk1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22268 MGI:98912
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930435E12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74663 MGI:1921913
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 1 Protein

name	Igsf11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207683 MGI:2388477
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667400 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667400
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	Cdgap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:55770847 GeneID:12549 MGI:1333857
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Cdc42 GTPase-activating protein transcript_id : NM_020260.2

name	B4galt4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142344191 GeneID:56375 MGI:1928387
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4 transcript_id : NM_019804.2

name	Upk1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384775 GeneID:22268 MGI:98912
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : uroplakin 1B transcript_id : NM_178924.3

name	4930435E12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400187 GeneID:74663 MGI:1921913
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 1 Protein product : RIKEN cDNA 4930435E12 gene transcript_id : XM_156106.6

name	Igsf11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254204 GeneID:207683 MGI:2388477
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : immunoglobulin superfamily, member 11 transcript_id : NM_170599.2

name	Cdgap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:55770848 CCDS:CCDS28172.1 GeneID:12549 MGI:1333857
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA] GO_function : GO:0005096 - GTPase activator activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0017124 - SH3 domain binding [Evidence IDA] GO_process : GO:0007165 - signal transduction [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IDA] codon_start : 1 product : Cdc42 GTPase-activating protein protein_id : NP_064656.2

name	B4galt4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9789889 CCDS:CCDS28173.1 GeneID:56375 MGI:1928387
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003945 - N-acetyllactosamine synthase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : beta-1,4-galactosyltransferase IV product : UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4 protein_id : NP_062778.1

name	Upk1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30725788 CCDS:CCDS28174.1 GeneID:22268 MGI:98912
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : uroplakin 1B protein_id : NP_849255.1

name	4930435E12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28493910 GeneID:74663 MGI:1921913
definition	codon_start : 1 product : hypothetical protein LOC74663 protein_id : XP_156106.2

name	Igsf11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254205 CCDS:CCDS28175.1 GeneID:207683 MGI:2388477
definition	GO_component : GO:0005886 - plasma membrane [Evidence ISS] codon_start : 1 note : immunoglobulin superfamily, member 13 product : immunoglobulin superfamily, member 11 protein_id : NP_733548.2

name	LOC100043289 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043289
definition	number : 2 pseudo : _no_value

name	LOC100043289 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043289
definition	number : 1 pseudo : _no_value

name	LOC667400 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667400
definition	number : 1 pseudo : _no_value

clone name	MSMg01-263D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215F14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-151A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108I24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-392L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258H24
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-305I12.b	B6Ng01-305I12.g
ACC	GA098799	GA098800
length	1,204	1,115
definition	B6Ng01-305I12.b	B6Ng01-305I12.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcaggaacatattaagaagatcatataatatcgacaagcctgttat tgcaataaaacattccaaacaaaagcaacttaaggaagaaaatatttatc tggtttacacattccaggtcacagaccatcactgagagaggtcagagcag gaaattactcacagcaaagatccacagcagaaaccatatttgcatgctgc ttagtggcttgttctgtggacctctcactggctcatgctcagctagattt cctaaattggccaaaactcactacctgttatctcagtcttcaatcatgaa cacaatcacaggcaaatctcataggagatgtcctcttcccaggtgacttt agactaaatcaagcaccactaaaaagtcaccaggacaatggccctaagtt ggcttcatcagagatgcaaagtcagttcaatacaggcagattagcgagtg tagtgcattttataataatatttaaggacagaagtcataggattatcctc ataaatgcacaagagacgtttgacaaagttcattgtgccttccagtcaaa gtctagaagccattatgaataaatgaatcagacctcaaaataatgaaggt tatatacaactaacctataggatgaggaaaagaaccggagagtagaatta aaaaaaaaaaaaaaaactaataacaataattttggtcaatgaaattcggt tttggtgatccataaactgccagagacaaaggagggaagacagtatggag gaaagaggtagatcactcaaataaaacaggagatgggactgggcgtgttt cctttaaaacctgggactgagacaaggatatcactcttacctttattgtg aaatatggtgcttgaagtcttaactagaggaataacacaagagaaagaaa tgagaggattaaaaataggaaaagtagaaatcaaatcaactgacttttat tttcaataacaaattctatattttgaaggccttgtataatttataaaaaa aaaagtttagattaagtagtttcagacataaaaaacatacaaatcattag tctcatatatacatacatgagatataagtaaaatatctcaatcagatatt tcaaaaaatatacttaggagaaacctatacgaagtggtaaaaggttatat tgagttttaaactgacaatcagtaagaatggtaaggtgatggaatttcca tcag	gaattctcctcttatggttacatcttacctttacatcaatgattgccaaa tccaagtacataagttaacagcattaataggaaactttctgaaaattcag atataactgtgcattggaatctcagagtctgatctggtctggaaggctca gttaaactacctgttactttaggctttatttttcaacaatagaatagcaa tcatggtgttctttgccacagaggtatgtcataaagattacatatgtgcc tgtaacaacaattaattttctttaaaaaaaggtcatgtattttgaagaaa gaaaggtgtatgtcagagggtttgaatggaggaaagaaaaggaagaaatg gtgtgattctatcataatctcgaaaataaaagacatgaaaaaagattaaa tgagactttatggaaaacagcatgttctttggcatactctaagtgtgtat tctcagatagatgtgccagacaggtgactttcttcagtgttggcttcatt tgcaggctgcaggggcagagaaaatatgaaatatttttgtcatccaggga ctcatgaattgtggttactaatactggctaggtatggttggagtgagtcc ttctagaatgtttttattgaatacttggccctcaataggtttacgtttga ccgtggtagaacctttcaggtagaagccctacagaagtgtagttaggtgc ttggaaagatgcccttcaacgaacttatgtttctgagactggttagcttt tttgagagtgttgtagagttgtactgtagacctggctctctggtctcagt tttcataattgtcaccactgccacatgcatttgacatttattaatggggg accttaacagagctgagcacagggtggtgttgttcttttaccccttataa ttgtgagataaacagcaacttatttttcttttgttagggtatctagtcct caactaattttgtcataaaccatgagaaatatagattccttataccatat atcctattattaaaatatactgcctaattattagaaagtttggacattac tggaatccaatgagatttggtttaaactcaagaagtggcccattaggccc tcattaaatttataa
quality values	Open. Hide. 58 41 41 33 62 34 22 62 62 47 62 56 51 62 62 62 47 62 47 49 62 62 62 59 44 59 62 62 62 62 56 59 59 19 22 12 12 23 23 18 22 28 30 56 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 54 54 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 56 48 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 59 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 47 52 62 62 62 62 62 62 62 54 58 58 58 58 58 58 58 58 58 58 54 42 58 58 58 52 58 58 58 58 52 58 58 54 58 58 54 58 58 54 58 58 58 54 58 58 58 54 47 58 58 54 58 58 58 54 58 58 52 58 40 58 54 58 52 58 58 58 58 54 58 54 58 58 54 54 49 30 58 54 52 58 58 51 58 50 58 58 58 41 58 58 58 58 58 51 58 53 58 46 30 58 58 43 58 58 58 58 58 52 58 38 38 58 58 58 49 33 58 48 50 54 50 58 37 31 58 39 58 58 58 58 58 58 58 58 58 49 58 58 52 50 50 39 43 38 37 49 51 51 50 48 49 50 54 37 50 49 58 58 49 44 44 40 53 51 40 42 58 50 41 29 40 58 52 51 49 42 58 49 33 58 41 40 50 37 39 52 50 32 39 53 54 37 52 53 52 47 51 39 37 54 24 40 52 39 54 42 53 53 53 35 54 49 51 52 28 35 19 32 51 52 34 41 49 51 49 46 37 41 54 46 25 47 33 51 33 39 40 40 37 37 34 32 33 52 29 54 41 34 31 54 54 39 40 31 17 54 31 34 42 32 41 49 33 32 28 31 26 30 22 36 45 28 45 33 53 21 20 25 27 52 35 35 46 46 28 28 31 21 31 51 32 31 25 31 31 43 13 31 25 27 26 30 46 30 20 31 39 33 20 30 31 36 34 12 24 29 25 28 46 31 28 24 25 40 15 26 21 47 19 27 28 25 26 35 19 32 32 31 29 37 32 33 28 33 34 28 38 30 18 31 31 24 42 29 25 37 22 32 22 9 19 28 10 41 26 6 24 31 20 33 23 19 22 9 29 21 21 31 31 20 23 31 31 23 30 20 24 44 36 47 21 30 18 16 32 17 43 44 20 11 17 22 11 31 41 22 32 26 24 44 23 34 33 42 44 11 23 42 31 32 27 25 27 7 6 13 30 32 30 10 9 32 25 29 8 16 28 43 31 15 12 21 21 22 26 24 32 43 47 23 32 20 11 19 20 16 14 18 21 23 12 18 11 4 11 9 43 10 16 7 16 47 34 40 34 47 29 47 26 19 19 20 38 18 20 16 28 15 8 8 13 11 11 16 16 21 29 20 20 5 7 4 13 17 19 12 38 34 34 34 23 9 5 5 4 21 5 40 21 5 6 15 5 9 25 7 13 9 22 9 6 6 4 6 4 11 6 14 5 3 3 11 4 10 4 5 2 5 5 4 12 11 13 18 17 23 28 25 15 6 5 16 8 6 16 6 5 23 8 5 22 12 4 4 12 26 19 20 11 17 17 17 6 7 12 7 10 8 27 4 12 7 9 12 5 2 5 13 3 3 6 9 4 5 3 2 3 2 8 8 5 5 3 2 3 17 29 21 4 4 8 8 13 5 1 2 2 2 5 2 1 12 12 4 3 3 4 2 1 3 2 2 2 4 3 5 4 6 16 7 11 5 17 23 6 4 4 4 4 1 5 3 4 5 14 6 5 8 10 4 9 27 9 2 4 6 2 3 2 1	Open. Hide. 56 47 56 44 62 62 62 62 62 62 43 23 21 23 23 28 28 36 49 41 56 49 62 56 56 59 62 62 62 62 62 59 62 62 49 62 59 62 59 62 62 62 62 62 62 62 59 49 59 59 59 59 59 59 56 62 49 49 59 46 35 33 34 45 62 59 62 62 54 62 62 62 62 62 59 62 62 62 54 56 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 59 56 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 50 62 59 62 62 62 59 59 43 62 59 54 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 59 62 62 56 56 50 48 56 56 59 59 59 56 51 49 59 62 62 62 59 62 62 62 62 54 50 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 56 62 56 51 59 56 62 62 62 62 62 62 62 59 62 62 59 62 56 54 59 62 62 62 59 62 59 62 62 49 50 32 32 50 59 62 62 59 62 59 59 62 51 51 56 50 34 50 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 56 56 56 54 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 59 62 59 56 62 62 62 62 62 49 62 51 62 62 56 59 59 62 62 62 62 62 62 51 43 50 43 50 51 46 56 50 51 59 59 62 62 59 56 62 62 62 59 62 62 62 62 62 62 59 62 41 43 37 34 35 34 59 62 62 62 62 62 62 62 59 62 62 59 59 59 56 59 56 56 50 62 62 62 62 62 59 59 59 59 59 59 62 62 59 59 56 56 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 49 39 46 35 48 59 59 59 59 59 59 62 62 62 62 62 62 62 59 62 62 59 62 62 56 59 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 59 62 62 62 62 59 59 62 62 62 62 62 62 59 59 59 59 62 62 59 62 62 62 59 59 59 59 62 59 62 59 62 62 62 62 62 51 62 62 62 62 62 62 59 62 62 59 62 62 59 56 62 56 56 56 56 51 47 44 62 62 56 62 62 62 47 56 56 56 56 56 51 62 56 62 62 54 47 62 62 56 62 62 62 47 51 42 56 37 50 51 56 56 56 56 62 51 47 56 62 56 62 62 56 56 56 62 56 56 56 62 62 62 56 56 56 56 56 56 41 49 31 47 62 62 62 47 62 62 62 62 46 43 56 42 43 43 39 41 23 26 24 9 18 15 52 62 52 62 42 52 52 52 31 35 24 52 47 43 62 35 62 62 48 44 62 46 52 52 47 54 52 42 41 42 46 43 62 38 54 52 51 51 37 48 52 54 54 46 33 52 34 28 45 58 39 52 39 54 39 41 52 52 42 42 52 34 8 25 9 16 10 25 36 35 47 54 54 45 50 36 41 42 58 16 19 25 23 22 30 21 46 42 42 39 49 50 54 52 38 43 52 38 42 58 42 24 41 17 34 32 54 45 18 45 48 32 21 35 19 46 22 24 46 38 25 41 51 32 25 7 13 12 19 46 30 51 50 39 45 25 16 39 53 33 50 53 50 49 50 50 31 31 58 32 36 35 30 41 18 50 46 28 32 19 40 21 33 52 49 15 26 31 52 53 34 39 20 50 46 35 39 46 49 26 22 37 38 39 35 53 39 26 38 49 31 42 24 35 50 50 50 50 29 26 24 14 9 18 26 24 32 31 20 51 29 32 39 50 34 42 29 38 31 38 33 32 21 42 45 9 13 23 37 32 50 33 8 14 49 51 49 26 52 29 50 32 28 19 40 21 20 35 35 30 35 40 40 14 45 11 13 38 19 40 13 35 24 32 27 24 40 27 25 49 29 17 28 11 9 31 6 11 10 5 13 15 23 28 10 40 40 19 8 33 25 12 11 9 9 17 35 23 32 34 18 28 12 12 40 29 32 28 30 16 10 20 14 9 9 18 7 53 53 53 19 21 25 35 33 14 20 6 7 9 12 31 40 7 11 11 32 32 31 28 33 34 16 12 12 17 32 26 31 22 21 42 45 35 30 8 6 9 8 8 6 9 6 9 9 28 8 7 6 6 12 17 25 6 5 5 6 26 20 15 21 18 16 11 10 12 27 9 9 19 11 36 7 7 25 8 6 31 15 8 33 7 19 13 37 28 39 26 23 5 20 23 13 11 21 26 18 6 26 21 5 10 6 11 6 14 10 8 17 30 8 6 15 12 19 22 17 20 17 8 18 16 9 12 9 9 11 19 33 8 17 6 6 6 9 25 16 6 8 5 9 5 15 26 21 36 33 18 32 19 10 7 10 7 26 8 11 11 6 19 19 11 11 48 33 8 5 5 11 22 32 11 8 7 6 14 10 11 21 5 11 17 19 26 3 3 3 5 16

Alignment Information

BAC End 1

BAC End 2

seq1: chr16_39680101_39681186
seq2: B6Ng01-305I12.g_71_1185

seq1  GAATTCTCCTCTTATGGTTACATCTTACCTTTACATCAATGATTGCCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTCTTATGGTTACATCTTACCTTTACATCAATGATTGCCAAA  50

seq1  TCCAAGTACATAAGTTAACAGCATTAATAGGAAACTTTCTGAAAATTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGTACATAAGTTAACAGCATTAATAGGAAACTTTCTGAAAATTCAG  100

seq1  ATATAACTGTGCATTGGAATCTCAGAGTCTGATCTGGTCTGGAAGGCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAACTGTGCATTGGAATCTCAGAGTCTGATCTGGTCTGGAAGGCTCA  150

seq1  GTTAAACTACCTGTTACTTTAGGCTTTATTTTTCAACAATAGAATAGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAACTACCTGTTACTTTAGGCTTTATTTTTCAACAATAGAATAGCAA  200

seq1  TCATGGTGTTCTTTGCCACAGAGGTATGTCATAAAGATTACATATGTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTGTTCTTTGCCACAGAGGTATGTCATAAAGATTACATATGTGCC  250

seq1  TGTAACAACAATTAATTTTCTTTAAAAAAAGGTCATGTATTTTGAAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACAACAATTAATTTTCTTTAAAAAAAGGTCATGTATTTTGAAGAAA  300

seq1  GAAAGGTGTATGTCAGAGGGTTTGAATGGAGGAAAGAAAAGGAAGAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTGTATGTCAGAGGGTTTGAATGGAGGAAAGAAAAGGAAGAAATG  350

seq1  GTGTGATTCTATCATAATCTCGAAAATAAAAGACATGAAAAAAGATTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGATTCTATCATAATCTCGAAAATAAAAGACATGAAAAAAGATTAAA  400

seq1  TGAGACTTTATGGAAAACAGCATGTTCTTTGGCATACTCTAAGTGTGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTTTATGGAAAACAGCATGTTCTTTGGCATACTCTAAGTGTGTAT  450

seq1  TCTCAGATAGATGTGCCAGACAGGTGACTTTCTTCAGTGTTGGCTTCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGATAGATGTGCCAGACAGGTGACTTTCTTCAGTGTTGGCTTCATT  500

seq1  TGCAGGCTGCAGGGGCAGAGAAAATATGAAATATTTTTGTCATCCAGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGCTGCAGGGGCAGAGAAAATATGAAATATTTTTGTCATCCAGGGA  550

seq1  CTCATGAATTGTGGTTACTAATACTGGCTAGGTATGGTTGGAGTGAGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGAATTGTGGTTACTAATACTGGCTAGGTATGGTTGGAGTGAGTCC  600

seq1  TTCTAGAATGTTTTTATTGAATACTTGGCCCTCAATAGGTTTACGTTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAATGTTTTTATTGAATACTTGGCCCTCAATAGGTTTACGTTTGA  650

seq1  CCGTGGTAGAACCTTTCAGGGAGAAGCCCTACAGAAGTGTAGTTAGGTGC  700
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCGTGGTAGAACCTTTCAGGTAGAAGCCCTACAGAAGTGTAGTTAGGTGC  700

seq1  TTGGAAAGATGCCCTTCAACGAACTTATG-TTCTGAGACTGGTTAGCTTT  749
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTGGAAAGATGCCCTTCAACGAACTTATGTTTCTGAGACTGGTTAGCTTT  750

seq1  TTTGAGAGTGTTGTAGAGTTGTACTGTAGACCTGGCTCTCTGGTCTCAGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAGTGTTGTAGAGTTGTACTGTAGACCTGGCTCTCTGGTCTCAGT  800

seq1  TTTCATAATTGTCACCACTGCCACATGCA-TTGACATTTATTAATGGGGA  848
      ||||||||||||||||||||||||||||| ||||||||||||||||||| 
seq2  TTTCATAATTGTCACCACTGCCACATGCATTTGACATTTATTAATGGGGG  850

seq1  CCTTTAACAGAGCTGAGCACAGGGTGGTG-TGTCCTTTAACCCCTTAT-A  896
       | |||||||||||||||||||||||||| ||| |||| ||||||||| |
seq2  ACCTTAACAGAGCTGAGCACAGGGTGGTGTTGTTCTTTTACCCCTTATAA  900

seq1  TTGTGAGATAAACAGC-ACT--ATTTTCTTT--GTAGGGTATCTAGT-CT  940
      |||||||||||||||| |||   ||||||||   ||||||||||||| ||
seq2  TTGTGAGATAAACAGCAACTTATTTTTCTTTTGTTAGGGTATCTAGTCCT  950

seq1  CAACT-ATTTTGTCAT-AACAATGAGAAA-ATAGATT-CATATA-CAT-T  984
      ||||| |||||||||| ||| |||||||| ||||||| | |||| ||| |
seq2  CAACTAATTTTGTCATAAACCATGAGAAATATAGATTCCTTATACCATAT  1000

seq1  AATCTATTATTAAAA-ATACTGCATAATATATAGAA--GTTGGACA-TAC  1030
      |  |||||||||||| ||||||| ||||   |||||   ||||||| |||
seq2  ATCCTATTATTAAAATATACTGCCTAATTATTAGAAAGTTTGGACATTAC  1050

seq1  T-GAATCC-ATGAGATGTGGTTTAAA--CAAG-AGTGGCCCA-TAGG--C  1072
      | |||||| ||||||| |||||||||  |||| ||||||||| ||||  |
seq2  TGGAATCCAATGAGATTTGGTTTAAACTCAAGAAGTGGCCCATTAGGCCC  1100

seq1  TCA-TATATTTATAA  1086
      ||| || ||||||||
seq2  TCATTAAATTTATAA  1115

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information