BAC Information

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BAC

Clone NameB6Ng01-307M12
Chromosome16 (Build37)
Map Location 71,205,625 - 71,300,072
singlet/doubletdoublet
Overlap genenone
Upstream geneEG664930, Gbe1, D16Ertd519e, LOC100039231
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307M12.bB6Ng01-307M12.g
ACCGA100461GA100462
length1,165486
definitionB6Ng01-307M12.b B6Ng01-307M12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,205,625 - 71,206,794)(71,299,581 - 71,300,072)
sequence
gaattctctgtttgatttggtatttagttgagtttggtctcactatagat
tgagtttgagagactctccaaacaatattgtctgtttaccattgccactg
gatttctcagaggacagacagcctctcttgctaaagacactgcttctcag
attttggattcaaaagatctaaactggatctgacaaagaccctgctaacc
agaaaatatccagattttatttaatattcttaatatttcctgtgggtgat
tttgaccctggtagatgtcactaggaagtatataaagcaagctgaatatg
ttatagtgagtgaacagaccagcaggcaggattactcctcagtctctgct
taagttcatgtctccaggttcttgccttaattaattttcctgaattcatt
gaagagaaaactaaaaaaaaaagacaaaaaaaatattcctgaattctaca
atcctccttctgatttttcattccattccaaaatcatctcacctcccttc
tataaatcaatcataacaatgtgataacgtttgcatgcatgtgtatttac
aaactatatacatatatatatttcaaattccattgttcgtgttttagtgt
tctcacttcattcattttctgttgctaaaatttaatgttgtgattcagca
atactttaaaaataaataagttttggaggtgtcaggcttctggcagctga
gaagtgcaagagtctagcaccagcattttcctggcatccaatgatagtct
tcttgctgactcttggtacagaagtgatgtcaaccttttaagacagcatc
caagaatgcttgcttgaacctccctactttgattcatgaaacccacaatg
ctgctagaggggatctcaattttaggaaatattatctatttcaaatttcc
tttacacacccacccttacattcacacatcagtgctgaaatcatacttcc
caacatataaacttttaatgaaacatattcaatgcataagcatgctgttc
cctataatatttgatatcgggacagtaaaatctattctgttcaaatcagt
gtgtcatgatgaaaataatatctacacatctctttctggtttttattgga
actctcactatgcagtcttacagaattcacaaataaattcccgttttgaa
tgcctcaattctacc

actcgggacaaccagaatcttctgaggcaaaagctttattgcttcttctc
aggaagaccccaaacccagaaaatggagctgcttatatagcccgcagcgt
gacgtttcagcacctgatatggcgtgacagcacctgattcattgcttgcc
catcaccccactactatgccccgagaatgggcagtgactaagagtgagtt
cactctagcgcttgcatacaaggcttgtttactagttaggcacagcggag
gccagcgccatcttataatggcgattgctcacagaaaggacggctctcca
caactacatattcaaataattgtatatatgatcctatttacaattttatg
taaatatatggaattgttttgttgttttgatattaatagatgttacattc
atctatatatattaactagactgaagtattgtttatgttttatataacta
tggatatatgtatgtgtatgtgtatgtgtatgtgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_71205625_71206794
seq2: B6Ng01-307M12.b_43_1207

seq1  GAATTCTCTGTTTGATTTGGTATTTAGTTGAGTTTGGTCTCACTATAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTTGATTTGGTATTTAGTTGAGTTTGGTCTCACTATAGAT  50

seq1  TGAGTTTGAGAGACTCTCCAAACAATATTGTCTGTTTACCATTGCCACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTGAGAGACTCTCCAAACAATATTGTCTGTTTACCATTGCCACTG  100

seq1  GATTTCTCAGAGGACAGACAGCCTCTCTTGCTAAAGACACTGCTTCTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTCAGAGGACAGACAGCCTCTCTTGCTAAAGACACTGCTTCTCAG  150

seq1  ATTTTGGATTCAAAAGATCTAAACTGGATCTGACAAAGACCCTGCTAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGATTCAAAAGATCTAAACTGGATCTGACAAAGACCCTGCTAACC  200

seq1  AGAAAATATCCAGATTTTATTTAATATTCTTAATATTTCCTGTGGGTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATATCCAGATTTTATTTAATATTCTTAATATTTCCTGTGGGTGAT  250

seq1  TTTGACCCTGGTAGATGTCACTAGGAAGTATATAAAGCAAGCTGAATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCCTGGTAGATGTCACTAGGAAGTATATAAAGCAAGCTGAATATG  300

seq1  TTATAGTGAGTGAACAGACCAGCAGGCAGGATTACTCCTCAGTCTCTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTGAGTGAACAGACCAGCAGGCAGGATTACTCCTCAGTCTCTGCT  350

seq1  TAAGTTCATGTCTCCAGGTTCTTGCCTTAATTAATTTTCCTGAATTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCATGTCTCCAGGTTCTTGCCTTAATTAATTTTCCTGAATTCATT  400

seq1  GAAGAGAAAACTAAAAAAAAAAGACAAAAAAAATATTCCTGAATTCTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAAAACTAAAAAAAAAAGACAAAAAAAATATTCCTGAATTCTACA  450

seq1  ATCCTCCTTCTGATTTTTCATTCCATTCCAAAATCATCTCACCTCCCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCCTTCTGATTTTTCATTCCATTCCAAAATCATCTCACCTCCCTTC  500

seq1  TATAAATCAATCATAACAATGTGATAACGTTTGCATGCATGTGTATTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATCAATCATAACAATGTGATAACGTTTGCATGCATGTGTATTTAC  550

seq1  AAACTATATACATATATATATTTCAAATTCCATTGTTCGTGTTTTAGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATATACATATATATATTTCAAATTCCATTGTTCGTGTTTTAGTGT  600

seq1  TCTCACTTCATTCATTTTCTGTTGCTAAAATTTAATGTTGTGATTCAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTTCATTCATTTTCTGTTGCTAAAATTTAATGTTGTGATTCAGCA  650

seq1  ATACTTTAAAAATAAATAAGTTTTGGAGGTGTCAGGCTTCTGGCAGCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTAAAAATAAATAAGTTTTGGAGGTGTCAGGCTTCTGGCAGCTGA  700

seq1  GAAGTGCAAGAGTCTAGCACCAGCATTTTCCTGGCATCCAATGATAGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGCAAGAGTCTAGCACCAGCATTTTCCTGGCATCCAATGATAGTCT  750

seq1  TCTTGCTGACTCTTGGTACAGAAGTGATGTCAACCTTTTAAGACAGCATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTGACTCTTGGTACAGAAGTGATGTCAACCTTTTAAGACAGCATC  800

seq1  CAAGAATGCTTGCTTGAACCTCCCTACTTTGATTCATGAAACCCACAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATGCTTGCTTGAACCTCCCTACTTTGATTCATGAAACCCACAATG  850

seq1  CTGCTAGAGGGGATCTCAATTTTAGGAAATATTATCTATTTCAAATTTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAGAGGGGATCTCAATTTTAGGAAATATTATCTATTTCAAATTTCC  900

seq1  TTTACACACCCA-CCTTACATTCACACATCAGTGCTGAAATCATACTT-C  948
      |||||||||||| ||||||||||||||||||||||||||||||||||| |
seq2  TTTACACACCCACCCTTACATTCACACATCAGTGCTGAAATCATACTTCC  950

seq1  CAACATATAAACTTTTAATGAAACATATTCAATGCATAAGCATGCTGTTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATATAAACTTTTAATGAAACATATTCAATGCATAAGCATGCTGTTC  1000

seq1  CCTATAATATTTGATATCGGGACAGTAAAATCTTATTCTGTTCAAATTCA  1048
      |||||||||||||||||||||||||||||||| ||||||||||||||   
seq2  CCTATAATATTTGATATCGGGACAGTAAAATC-TATTCTGTTCAAAT--C  1047

seq1  AGTGTGTTCATTGATG-AAATATAATCTACACATCTCTTTCTGGTTTTTA  1097
      |||||| ||| ||||| |||||  ||||||||||||||||||||||||||
seq2  AGTGTG-TCA-TGATGAAAATAATATCTACACATCTCTTTCTGGTTTTTA  1095

seq1  TTGAAACTCTCACTATGCAGTCTTACAGAATTTTCAACAAAATAAATTCC  1147
      ||| ||||||||||||||||||||||||||||  |    |||||||||||
seq2  TTGGAACTCTCACTATGCAGTCTTACAGAATTCAC----AAATAAATTCC  1141

seq1  TGTTTTTAAATGCTC-ATTCTACC  1170
       ||||| ||   ||| ||||||||
seq2  CGTTTTGAATGCCTCAATTCTACC  1165


seq1: chr16_71299581_71300072
seq2: B6Ng01-307M12.g_68_559 (reverse)

seq1  TACACATACACATACACATACACATACATATATCCATAGTTATATAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATACACATACACATACACATACATATATCCATAGTTATATAAAAC  50

seq1  ATAAACAATACTTCAGTCTAGTTAATATATATAGATGAATGTAACATCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAATACTTCAGTCTAGTTAATATATATAGATGAATGTAACATCTA  100

seq1  TTAATATCAAAACAACAAAACAATTCCATATATTTACATAAAATTGTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATCAAAACAACAAAACAATTCCATATATTTACATAAAATTGTAAA  150

seq1  TAGGATCATATATACAATTATTTGAATATGTAGTTGTGGAGAGCCGTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATCATATATACAATTATTTGAATATGTAGTTGTGGAGAGCCGTCCT  200

seq1  TTCTGTGAGCAATCGCCATTATAAGATGGCGCTGGCCTCCGCTGTGCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGAGCAATCGCCATTATAAGATGGCGCTGGCCTCCGCTGTGCCTA  250

seq1  ACTAGTAAACAAGCCTTGTATGCAAGCGCTAGAGTGAACTCACTCTTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTAAACAAGCCTTGTATGCAAGCGCTAGAGTGAACTCACTCTTAGT  300

seq1  CACTGCCCATTCTCGGGGCATAGTAGTGGGGTGATGGGCAAGCAATGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCCATTCTCGGGGCATAGTAGTGGGGTGATGGGCAAGCAATGAAT  350

seq1  CAGGTGCTGTCACGCCATATCAGGTGCTGAAACGTCACGCTGCGGGCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGCTGTCACGCCATATCAGGTGCTGAAACGTCACGCTGCGGGCTAT  400

seq1  ATAAGCAGCTCCATTTTCTGGGTTTGGGGTCTTCCTGAGAAGAAGCAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCAGCTCCATTTTCTGGGTTTGGGGTCTTCCTGAGAAGAAGCAATA  450

seq1  AAGCTTTTGCCTCAGAAGATTCTGGTTGTCCCGAGTGAATTC  492
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTTGCCTCAGAAGATTCTGGTTGTCCCGAGTGAATTC  492


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