BAC Information

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BAC

Clone NameB6Ng01-309A23
Chromosome16 (Build37)
Map Location 23,183,333 - 23,183,775
singlet/doubletsinglet
Overlap geneLOC100043541
Upstream geneEG545152, EG666421, Sfrs10, LOC100043507, Etv5, Dgkg, LOC671242, LOC666459, Crygs, Tbccd1, Dnajb11, Ahsg, Fetub, Hrg, Kng2, LOC624311, LOC666486, LOC666489, Kng1, LOC666493, Eif4a2, Rfc4, Adipoq, EG625835
Downstream geneBC106179, St6gal1, Rtp1, Masp1, LOC100043018, Rtp4, EG625969, LOC100043023, Sst, Rtp2, Bcl6, EG433009
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309A23.bB6Ng01-309A23.g
ACCGA101394GA101395
length4371,181
definitionB6Ng01-309A23.b B6Ng01-309A23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aatatgaacacaagaagaaatcagatgtccacaacataaggaagaagata
caggatagattctctagtggtcctcagaaaaaatccatccatcctatcaa
aagcctgctgtcaaacttatagtttccagagcttcaggaaaattagccag
tcatgtgtcaaagctggttatgaggactccagaaaagggaaatagaatac
cattaagtcttgtgttttataaaagtgtcaagggagatgtttggcatagg
catggtatggtgcctgaagtaccagccccaatgatggtatagtatagaat
agactttattcagggcatggggagggaagctgagggggtagagacagaga
aagggggaaagagagaagaagaagagcaggagaaggaagaggaggagcta
gccatgagcacctggagagagagggaggaggagaatg
gaattcttctgacaaatggagattccccacagatacttataagaacagcc
aagtttcactcatgcaagaatttatcaaggcctaggaaataggggtttgt
ggtattgcattattcatgagaaggtctgctagagcaaaaccccctggtgc
tagctttcacaaggctcaaaggagtagcacaaattgtgactagggtgtga
aatccttacctgtcattagctgaccctaggcagggctgttttaactttac
tgtaaatattacctggttcctgtaagtccttttgaagtcattcctttgtt
ttgtgccaagtaacttcaatgtactttgtctgctgtgacatcctacccct
ttgttttcggtattatataagactggtgttcactttgtgaaaatacactc
agattctccacactctctcatgtcgcttctgtttgtcactcaccaactct
atgcccatttgtccaagactctgattcacacggatcgaggagggcccact
gagcccggtccctggtatggaataacgtagaaactagagataacacaaaa
aactaagagaccaatatgtagaatgcagagggaaagaagaaaaaagaagc
tgcagagagcagcagaatcaggcagacttcctcttccgtgggacagaata
gatcttctcttaataacaaagcaggcttagtcttattaaagggacaaagc
tttcttcttacaaacttgggtttaattcatttagcattaaaaggttagaa
gcttttttctttctctatgcaataaagattggggttcatttttcatccag
aatgactgagatctttctacacttacacttgggcttttgttccatataca
tatgtaagtatagatgtaattgtgaaaatgcatgcaagcagccccaactg
atttgaatgggaatgtataaatgcacatccatgaatctatatatatgtga
atttatgcatatttgcttatgtaaagttttccttcttgtgagtgtgagca
tgattctcttgtcctagtgtcataaaaagtttattgcttccaactccccc
taatgtgacaagcaagaaggcatctggacaaaaagaaagctcaagccatt
tattcatgcctatctcctactattttagatgagtgcatatgtggagaact
gtagtccacctcagaaaacacacggaaggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_23183333_23183775
seq2: B6Ng01-309A23.b_46_488 (reverse)

seq1  CATTCTCCTCCTCCCTCTCTCTCCAGGTGCTCATGGCTAGCTCCTCCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCCTCCTCCCTCTCTCTCCAGGTGCTCATGGCTAGCTCCTCCTCT  50

seq1  TCCTTCTCCTGCTCTTCTTCTTCTCTCTTTCCCCCTTTCTCTGTCTCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTCCTGCTCTTCTTCTTCTCTCTTTCCCCCTTTCTCTGTCTCTAC  100

seq1  CCCCTCAGCTTCCCTCCCCATGCCCTGAATAAAGTCTATTCTATACTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCAGCTTCCCTCCCCATGCCCTGAATAAAGTCTATTCTATACTATA  150

seq1  CCATCATTGGGGCTGGTACTTCAGGCACCATACCATGCCTATGCCAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATTGGGGCTGGTACTTCAGGCACCATACCATGCCTATGCCAAACA  200

seq1  TCTCCCTTGACACTTTTATAAAACACAAGACTTAATGGTATTCTATTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTTGACACTTTTATAAAACACAAGACTTAATGGTATTCTATTTCC  250

seq1  CTTTTCTGGAGTCCTCATAACCAGCTTTGACACATGACTGGCTAATTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTGGAGTCCTCATAACCAGCTTTGACACATGACTGGCTAATTTTC  300

seq1  CTGAAGCTCTGGAAACTATAAGTTTGACAGCAGGCTTTTGATAGGATGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCTCTGGAAACTATAAGTTTGACAGCAGGCTTTTGATAGGATGGA  350

seq1  TGGATTTTTTCTGAGGACCACTAGAGAATCTATCCTGTATCTTCTTCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTTTTCTGAGGACCACTAGAGAATCTATCCTGTATCTTCTTCCTT  400

seq1  ATGTTGTGGACATCTGATTTCTTCTTGTGTTCATATTGAATTC  443
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTGGACATCTGATTTCTTCTTGTGTTCATATTGAATTC  443