BAC Information

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BAC

Clone NameB6Ng01-309C15
Chromosome16 (Build37)
Map Location 43,007,010 - 43,008,085
singlet/doubletsinglet
Overlap genenone
Upstream geneLsamp, Gap43, BC002163
Downstream geneLOC667484, Zbtb20, LOC100043314, Drd3, Qtrtd1, 2610015P09Rik, Zdhhc23, Gramd1c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309C15.bB6Ng01-309C15.g
ACCGA101474GA101475
length1,1671,074
definitionB6Ng01-309C15.b B6Ng01-309C15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtgggct
ttttgtcttactgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggagtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccaagcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagattgaagtttttatcatac
agatctttcacctccttagttagtgtcacgccaagatattttatattatt
gtgactatgagaaggtgtgttccctatttctttcttcagctgttattctt
tgtataagagaaacgcatgacttgttggtttatttttattatccagctac
tcacgagcttgtttatcagttaggagtctctgtagacttttaggtcactt
aatatacctatccatatcatctgcgaggaattcggactggccttccaatg
atatccctggattccct
gaattctgtattcagtaaaagaaaacacttgagactcctagtaaagggaa
accttgagatgtttgaaatatccattcgaaataatgggaacatttaggta
attgtctgctcaaaacaaggatcaagctttttgaggtcataaaatgcttg
accttcccaagtatgatgaatgcaaaaagcttaccactaaattacacaat
agatggtaagattgttgaatctatctggaaaataacatttcaaaagctcc
atacactatctgattcattaaagaaataattagagagacgattttcccta
aaatgaaggagaatcaaaaatgtgatattcgcaaaagaggatgaagtgtt
ctcatctttctgtggaacatgaatagggttattagctctgctcttgctat
gggcattcatcatggtgaagaaaagcatttccaaaagaacacagctttgc
tgatcctgggttcctgataatatcccatgatagaacaggagctttcacac
acaatcgaactgacagtcatttactctgcactcagaaaagccaaaagtag
agtacaagtcataaagtgccaaaattaaggctaagtgcaaacctctcaac
ttcacacccatttacatgtgaaaaacaaaaatgccctgtgcagtgagctg
aaggggagagcagaatggggctggaatgatttatctgcctcagctacagc
tcatctgctgcactgaaaagattaaaactaactttgctcaagagttgagt
ccccttggtacaatctgtctaatcacccaactctctacagtcttttctct
ctcttctcttaaactgtccctccctccctccctccctctcgctctctcca
ttttttctaaatacaagatgtataatattatgttaccttgaatgatatta
ttcttcaaaaactgcatattattgggcacataacacaaccaggtggtgtc
atccactaaaagaataagagaaatgggattcaatgaattgctaaatacat
aaatcatatacatctttctattatggccaataacggcagcagtactatag
cattctaagcctggcataagggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_43007010_43008085
seq2: B6Ng01-309C15.g_63_1136 (reverse)

seq1  GACCTTTATGCCAGCTTTAGAATTGCTTATAGTTACTGCCTGCCGTTATT  50
      |||| |||||||||  |||||| ||| ||||| ||||| |||||||||||
seq2  GACCCTTATGCCAGGCTTAGAA-TGC-TATAG-TACTG-CTGCCGTTATT  46

seq1  -GCCAT-ATAG-AAGATGTATATGATTTATGTATTTAGCAATTCATTTGA  97
       ||||| |||| ||||||||||||||||||||||||||||||||| ||||
seq2  GGCCATAATAGAAAGATGTATATGATTTATGTATTTAGCAATTCA-TTGA  95

seq1  ATCCCATTTCTCTTATTCTTTTAGTGGATGACA-CACCTGTTTGTGTTAT  146
      ||||||||||||||||||||||||||||||||| |||||| |||||||| 
seq2  ATCCCATTTCTCTTATTCTTTTAGTGGATGACACCACCTGGTTGTGTTA-  144

seq1  TGTG-CCAATAATATGCAGTTTTTTGAAGAATAATATCATTCAAGGTAAC  195
      |||| |||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGTGCCCAATAATATGCAG-TTTTTGAAGAATAATATCATTCAAGGTAAC  193

seq1  ATAATATTATACATCTTGTATTTAGAAAAAATGGAGAGAGCGAGAGGGAG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATTATACATCTTGTATTTAGAAAAAATGGAGAGAGCGAGAGGGAG  243

seq1  GGAGGGAGGGAGGGACAGTTTAAGAGAAGAGAGAGAAAAGACTGTAGAGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAGGGAGGGACAGTTTAAGAGAAGAGAGAGAAAAGACTGTAGAGA  293

seq1  GTTGGGTGATTAGACAGATTGTACCAAGGGGACTCAACTCTTGAGCAAAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGTGATTAGACAGATTGTACCAAGGGGACTCAACTCTTGAGCAAAG  343

seq1  TTAGTTTTAATCTTTTCAGTGCAGCAGATGAGCTGTAGCTGAGGCAGATA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTTAATCTTTTCAGTGCAGCAGATGAGCTGTAGCTGAGGCAGATA  393

seq1  AATCATTCCAGCCCCATTCTGCTCTCCCCTTCAGCTCACTGCACAGGGCA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTCCAGCCCCATTCTGCTCTCCCCTTCAGCTCACTGCACAGGGCA  443

seq1  TTTTTGTTTTTCACATGTAAATGGGTGTGAAGTTGAGAGGTTTGCACTTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTTCACATGTAAATGGGTGTGAAGTTGAGAGGTTTGCACTTA  493

seq1  GCCTTAATTTTGGCACTTTATGACTTGTACTCTACTTTTGGCTTTTCTGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTAATTTTGGCACTTTATGACTTGTACTCTACTTTTGGCTTTTCTGA  543

seq1  GTGCAGAGTAAATGACTGTCAGTTCGATTGTGTGTGAAAGCTCCTGTTCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGAGTAAATGACTGTCAGTTCGATTGTGTGTGAAAGCTCCTGTTCT  593

seq1  ATCATGGGATATTATCAGGAACCCAGGATCAGCAAAGCTGTGTTCTTTTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGGATATTATCAGGAACCCAGGATCAGCAAAGCTGTGTTCTTTTG  643

seq1  GAAATGCTTTTCTTCACCATGATGAATGCCCATAGCAAGAGCAGAGCTAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCTTTTCTTCACCATGATGAATGCCCATAGCAAGAGCAGAGCTAA  693

seq1  TAACCCTATTCATGTTCCACAGAAAGATGAGAACACTTCATCCTCTTTTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCTATTCATGTTCCACAGAAAGATGAGAACACTTCATCCTCTTTTG  743

seq1  CGAATATCACATTTTTGATTCTCCTTCATTTTAGGGAAAATCGTCTCTCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATATCACATTTTTGATTCTCCTTCATTTTAGGGAAAATCGTCTCTCT  793

seq1  AATTATTTCTTTAATGAATCAGATAGTGTATGGAGCTTTTGAAATGTTAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTCTTTAATGAATCAGATAGTGTATGGAGCTTTTGAAATGTTAT  843

seq1  TTTCCAGATAGATTCAACAATCTTACCATCTATTGTGTAATTTAGTGGTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGATAGATTCAACAATCTTACCATCTATTGTGTAATTTAGTGGTA  893

seq1  AGCTTTTTGCATTCATCATACTTGGGAAGGTCAAGCATTTTATGACCTCA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTTGCATTCATCATACTTGGGAAGGTCAAGCATTTTATGACCTCA  943

seq1  AAAAGCTTGATCCTTGTTTTGAGCAGACAATTACCTAAATGTTCCCATTA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTTGATCCTTGTTTTGAGCAGACAATTACCTAAATGTTCCCATTA  993

seq1  TTTCGAATGGATATTTCAAACATCTCAAGGTTTCCCTTTACTAGGAGTCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGAATGGATATTTCAAACATCTCAAGGTTTCCCTTTACTAGGAGTCT  1043

seq1  CAAGTGTTTTCTTTTACTGAATACAGAATTC  1076
      |||||||||||||||||||||||||||||||
seq2  CAAGTGTTTTCTTTTACTGAATACAGAATTC  1074