MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-310E08
Chromosome	16 (Build37)
Map Location	84,745,687 - 84,924,103
singlet/doublet	doublet
Overlap gene	Jam2, Atp5j, LOC100039950, Gabpa, Gm311
Upstream gene	EG621729, LOC640489, LOC665664, LOC547311, LOC100039893, LOC100039634, Mrpl39
Downstream gene	App, Cyyr1, LOC100039994, LOC622000, Adamts1, Adamts5
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG621729 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:621729 MGI:3645784
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	LOC640489 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:640489
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC665664 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665664
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC547311 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:547311
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 9 Proteins pseudo : _no_value

name	LOC100039893 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039893
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100039634 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039634
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Mrpl39 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27393 MGI:1351620
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Jam2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67374 MGI:1933820
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp5j (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11957 MGI:107777
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100039950 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039950
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs

name	Gabpa (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14390 MGI:95610
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm311 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224402 MGI:2685157
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	App (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11820 MGI:88059
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyyr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224405 MGI:2152187
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039994 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039994
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 95 ESTs, 6 Proteins

name	LOC622000 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622000
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 107 ESTs, 9 Proteins pseudo : _no_value

name	Adamts1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11504 MGI:109249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adamts5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23794 MGI:1346321
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrpl39 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560437 GeneID:27393 MGI:1351620
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein L39 transcript_id : NM_017404.2

name	Jam2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352774 GeneID:67374 MGI:1933820
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : junction adhesion molecule 2 transcript_id : NM_023844.3

name	Atp5j (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980637 GeneID:11957 MGI:107777
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F transcript_id : NM_016755.2

name	LOC100039950 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268122 GeneID:100039950
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : hypothetical protein LOC100039950 transcript_id : XM_001473834.1

name	Gabpa (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328118 GeneID:14390 MGI:95610
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GA repeat binding protein, alpha transcript_id : NM_008065.2

name	Gm311 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268124 GeneID:224402 MGI:2685157
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : gene model 311, (NCBI) transcript_id : XM_001473851.1

name	App (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47271503 GeneID:11820 MGI:88059
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : amyloid beta (A4) precursor protein transcript_id : NM_007471.2

name	Cyyr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130051 GeneID:224405 MGI:2152187
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine and tyrosine-rich protein 1 transcript_id : NM_144853.3

name	LOC100039994 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268127 GeneID:100039994
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 95 ESTs, 6 Proteins product : similar to DnaJ (Hsp40) homolog, subfamily B, member 6 transcript_id : XM_001473910.1

name	Adamts1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47087139 GeneID:11504 MGI:109249
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1 transcript_id : NM_009621.3

name	Adamts5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125490360 GeneID:23794 MGI:1346321
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) transcript_id : NM_011782.2

name	Mrpl39 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560438 GeneID:27393 MGI:1351620
definition	GO_component : GO:0005762 - mitochondrial large ribosomal subunit [Evidence ISS]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence ISS] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0000002 - mitochondrial genome maintenance [Evidence TAS]; GO:0006412 - protein biosynthesis [Evidence ISS] codon_start : 1 note : ribosomal protein, mitochondrial, L5 product : mitochondrial ribosomal protein L39 protein_id : NP_059100.2

name	Jam2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543010 GeneID:67374 MGI:1933820
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : junction adhesion molecule B; junction cell adhesion molecule 2 product : junction adhesion molecule 2 protein_id : NP_076333.2

name	Atp5j (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7949005 CCDS:CCDS28283.1 GeneID:11957 MGI:107777
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0015078 - hydrogen ion transporter activity [Evidence IEA]; GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA] GO_process : GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0015992 - proton transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : mitochondrial ATP synthase coupling factor 6; ATP synthase coupling factor VI product : ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F protein_id : NP_058035.1

name	LOC100039950 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268123 GeneID:100039950
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473884.1

name	Gabpa (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328119 CCDS:CCDS28284.1 GeneID:14390 MGI:95610
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : GA-binding protein alpha-subunit product : GA repeat binding protein, alpha protein_id : NP_032091.2

name	Gm311 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268125 GeneID:224402 MGI:2685157
definition	codon_start : 1 product : similar to heterogeneous nuclear ribonucleoprotein D-like protein_id : XP_001473901.1

name	App (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47271504 CCDS:CCDS28285.1 GeneID:11820 MGI:88059
definition	GO_component : GO:0045177 - apical part of cell [Evidence IDA]; GO:0030424 - axon [Evidence IDA]; GO:0035253 - ciliary rootlet [Evidence IDA]; GO:0005905 - coated pit [Evidence IEA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0031410 - cytoplasmic vesicle [Evidence IDA]; GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IDA]; GO:0016020 - membrane [Evidence TAS] [Evidence IDA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0031594 - neuromuscular junction [Evidence IDA]; GO:0043005 - neuron projection [Evidence IDA]; GO:0048471 - perinuclear region [Evidence IDA]; GO:0051233 - spindle midzone [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005507 - copper ion binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IDA]; GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO:0008201 - heparin binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008344 - adult locomotory behavior [Evidence IMP]; GO:0006915 - apoptosis [Evidence IEA]; GO:0008088 - axon cargo transport [Evidence IMP]; GO:0016199 - axon midline choice point recognition [Evidence IMP]; GO:0007409 - axonogenesis [Evidence IMP]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0048669 - collateral sprouting in the absence of injury [Evidence IGI]; GO:0006878 - copper ion homeostasis [Evidence IMP] [Evidence IGI]; GO:0016358 - dendrite development [Evidence IMP] [Evidence IGI]; GO:0006897 - endocytosis [Evidence IEA]; GO:0030198 - extracellular matrix organization and biogenesis [Evidence IGI]; GO:0030900 - forebrain development [Evidence IMP]; GO:0000085 - G2 phase of mitotic cell cycle [Evidence IMP]; GO:0007626 - locomotory behavior [Evidence IGI]; GO:0007617 - mating behavior [Evidence IGI]; GO:0006378 - mRNA polyadenylation [Evidence IDA]; GO:0031175 - neurite development [Evidence IDA]; GO:0016322 - neuron remodeling [Evidence IMP]; GO:0007219 - Notch signaling pathway [Evidence IEA]; GO:0045931 - positive regulation of progression through mitotic cell cycle [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA] [Evidence IGI]; GO:0050885 - regulation of balance [Evidence IGI]; GO:0040014 - regulation of body size [Evidence IMP]; GO:0050803 - regulation of synapse structure and function [Evidence IMP]; GO:0006445 - regulation of translation [Evidence IDA]; GO:0051563 - smooth endoplasmic reticulum calcium ion homeostasis [Evidence IGI]; GO:0001967 - suckling behavior [Evidence IGI]; GO:0051124 - synaptic growth at neuromuscular junction [Evidence IGI]; GO:0008542 - visual learning [Evidence IMP] codon_start : 1 note : protease nexin II product : amyloid beta (A4) precursor protein protein_id : NP_031497.2

name	Cyyr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450067 CCDS:CCDS28286.1 GeneID:224405 MGI:2152187
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence NAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : cysteine and tyrosine-rich protein 1 protein_id : NP_659102.1

name	LOC100039994 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268128 GeneID:100039994
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473960.1

name	Adamts1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059082 CCDS:CCDS28287.1 GeneID:11504 MGI:109249
definition	GO_component : GO:0005604 - basement membrane [Evidence IDA]; GO:0031410 - cytoplasmic vesicle [Evidence IDA]; GO:0031012 - extracellular matrix [Evidence IDA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0008201 - heparin binding [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence ISS] [Evidence IMP] [Evidence IDA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0001822 - kidney development [Evidence IMP]; GO:0016525 - negative regulation of angiogenesis [Evidence ISS]; GO:0001542 - ovulation (sensu Mammalia) [Evidence IMP]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 1 protein_id : NP_033751.2

name	Adamts5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125490361 CCDS:CCDS28288.1 GeneID:23794 MGI:1346321
definition	GO_component : GO:0031012 - extracellular matrix [Evidence IEA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : implantin product : a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2) protein_id : NP_035912.2

name	EG621729 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621729
definition	number : 3 pseudo : _no_value

name	EG621729 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621729
definition	number : 2 pseudo : _no_value

name	EG621729 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:621729
definition	number : 1 pseudo : _no_value

name	LOC640489 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:640489
definition	number : 1 pseudo : _no_value

name	LOC640489 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:640489
definition	number : 2 pseudo : _no_value

name	LOC640489 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:640489
definition	number : 3 pseudo : _no_value

name	LOC665664 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665664
definition	number : 1 pseudo : _no_value

name	LOC100039893 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039893
definition	number : 2 pseudo : _no_value

name	LOC100039893 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039893
definition	number : 1 pseudo : _no_value

name	LOC100039634 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039634
definition	number : 1 pseudo : _no_value

name	LOC100039634 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039634
definition	number : 2 pseudo : _no_value

name	LOC547311 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268119 GeneID:547311
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 9 Proteins product : similar to Scr3 pseudo : _no_value transcript_id : XR_031351.1

name	LOC622000 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268131 GeneID:622000
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 107 ESTs, 9 Proteins product : similar to Acidic ribosomal phosphoprotein P0 pseudo : _no_value transcript_id : XR_031460.1

clone name	MSMg01-294C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114A04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-199N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059N03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-338P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320G23
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-310E08.b	B6Ng01-310E08.g
ACC	GA102295	GA102296
length	231	1,113
definition	B6Ng01-310E08.b	B6Ng01-310E08.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(84,923,873 - 84,924,103)	(84,745,687 - 84,746,797)
sequence	cataatccagaaaaaaatagtaaaaatatttaccactaaataaaatttgt tcgccactaaaaagtcacctacactgaaaaatgaaaaggaaaaatcatat aatcaataacctctccacagactgtgaatcagccctgcgccattctccag gtgagaactcgggtgagaacccagtattaaccttggaagtaaggaaggga gggaaagggaggggaagagagagaaggcaga	gaattccagtcctcttgctttcaaaacatgggctcttacctacaaagcca tctcttcatcccgaattcaatctcttctttacatatatatatatatattt agtaaacaagttccatgccatggcatgcatgtggaagccagaaggcagct agctagcaggaaatggttctttccttcccacccaagaggctctgtggact aaactcaggctttgtggcaagtgtccttacccactggtccatctctctgt cccctagttcagtcttcacaggtttctatcatgttattaaatcttctggc taaaacagtacctgtcccttccaaaatggataggcatttctgcctatatc ttttaaagcaggcaaactggatagatgagtggtgagaatgctgaccttgg aaaagccttccctctggcattcatctctgcagttcctctaggagtgcggt gctgctttgagttctgagggagagtcagttctcgtgaattcaatttggac tttcccatgccctccctccaaggtcaggaaaccaatagaaggtttctgca ggctgctgtcgagtatatctggtccaataatacattctgacactggggaa atagccacaggatattatgaaacctaggaggcccagtacaaaatgcactc aggctaaaattctattgatctcctgacaccatatgctcctgttctaaccg tgggaggcagagtgtcagtgcaggcccagtgacaaaagtccattagctgt tcaaaggtctgatgatttattcttttccaatgctcaattccttagtaaaa agccattagtgatccatccgggcactggtggcgcatgcctttaatcccag cacttgggaggcagaggcaggcggatttctgagttcgaggccagcctggt ctgctgagtgagttccatattggagggtgtatgaattggctgcccttcac agcttggctctgaaagcatagagcacagaccagatcagcatcaagtccca tcatgtccatccatgacgcactgctaccagataggactcatgtccctagc tggaaccgagtgtttccaacaaaagaaccgatgggagcatatttttctcc attcaattctatc
quality values	Open. Hide. 37 14 62 62 62 47 62 32 31 62 62 62 49 62 62 62 62 59 59 59 62 62 62 62 62 59 49 49 49 32 31 28 34 29 49 51 59 62 62 62 62 62 62 62 62 59 62 59 59 62 62 62 59 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 54 54 54 62 62 62 62 59 62 62 49 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 28	Open. Hide. 62 47 51 47 62 62 47 32 62 62 62 45 43 34 28 45 56 32 34 45 62 46 30 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 54 54 54 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 59 62 62 62 54 54 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 48 62 62 62 62 62 62 42 36 62 62 43 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 52 58 58 58 58 58 58 58 54 58 58 58 58 58 58 51 58 58 58 58 58 58 58 58 58 58 58 45 40 58 54 58 58 54 54 49 58 58 58 58 48 58 38 58 58 58 52 58 58 39 54 35 58 58 58 58 58 51 51 42 58 51 58 58 58 58 58 51 58 53 58 49 58 53 53 53 58 58 58 58 58 46 58 42 38 58 54 48 54 54 54 54 53 58 58 58 58 58 58 52 52 51 58 58 58 58 58 58 58 50 50 51 39 58 58 46 51 51 41 58 41 46 41 39 51 51 47 51 58 58 58 50 58 54 51 41 58 36 23 39 31 58 58 41 42 53 52 52 39 58 58 40 50 54 42 53 53 58 53 42 29 58 50 50 50 58 49 38 35 49 41 41 52 53 53 53 40 41 50 49 40 51 50 51 39 39 32 49 53 34 49 40 49 51 53 51 49 54 37 54 51 44 54 35 30 45 49 54 53 33 39 54 44 49 21 54 21 49 34 54 23 52 54 37 52 45 52 53 52 45 39 17 54 31 49 34 32 37 32 49 31 32 19 26 49 49 37 40 41 53 31 46 38 39 24 47 52 51 38 34 32 24 47 40 26 49 25 53 52 32 53 33 42 41 17 53 31 33 41 46 53 31 51 49 26 31 34 22 25 30 53 30 33 32 22 31 52 39 32 42 30 25 37 13 30 42 51 51 51 41 30 32 32 21 32 45 30 25 31 31 27 29 26 30 24 43 32 43 31 51 51 33 27 31 30 51 46 21 31 36 27 30 32 28 31 42 26 40 30 48 32 31 31 36 31 47 30 23 38 41 14 31 31 42 31 46 25 31 19 42 24 38 31 42 11 42 34 31 28 39 20 19 27 27 27 47 32 28 32 24 41 17 28 33 31 19 32 24 39 23 31 29 11 8 30 27 37 28 24 37 31 31 27 31 31 38 18 23 36 36 18 27 25 24 31 27 36 33 15 22 31 24 36 14 47 24 18 31 21 31 32 31 23 24 12 11 26 21 17 29 34 32 48 33 32 33 32 24 26 27 27 31 33 29 22 32 32 32 34 22 10 25 37 30 21 22 22 26 23 10 33 10 17 19 14 22 21 21 15 15 29 8 29 7 20 32 23 20 13 32 29 17 19 19 29 28 36 32 27 31 27 27 21 20 16 18 12 7 20 13 13 9 24 16 14 13 15 8 20 10 16 27 20 28 22 16 21 15 13 24 20 24 15 6 11 7 15 13 15 17 14 8 16 33 21 11 17 7 13 12 9 5 3 3 7 22 6 7 4 4 14 11 24 19 11 5 27 5 7 18 28 22 11 5 9 17 8 16 10 19 8 19 25 8 13 6 17 9 3 4 6 12 30 26 7 10 11 7 13 18 11 14 15 6 11 13 7 7 7 6 6 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr16_84923873_84924103
seq2: B6Ng01-310E08.b_49_279 (reverse)

seq1  TCTGCCTTCTCTCTCTTCCCCTCCCTTTCCCTCCCTTCCTTACTTCCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTTCTCTCTCTTCCCCTCCCTTTCCCTCCCTTCCTTACTTCCAAG  50

seq1  GTTAATACTGGGTTCTCACCCGAGTTCTCACCTGGAGAATGGCGCAGGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATACTGGGTTCTCACCCGAGTTCTCACCTGGAGAATGGCGCAGGGC  100

seq1  TGATTCACAGTCTGTGGAGAGGTTATTGATTATATGATTTTTCCTTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCACAGTCTGTGGAGAGGTTATTGATTATATGATTTTTCCTTTTCA  150

seq1  TTTTTCAGTGTAGGTGACTTTTTAGTGGCGAACAAATTTTATTTAGTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAGTGTAGGTGACTTTTTAGTGGCGAACAAATTTTATTTAGTGGT  200

seq1  AAATATTTTTACTATTTTTTTCTGGATTATG  231
      |||||||||||||||||||||||||||||||
seq2  AAATATTTTTACTATTTTTTTCTGGATTATG  231

seq1: chr16_84745687_84746797
seq2: B6Ng01-310E08.g_69_1181

seq1  GAATTCCAGTCCTCTTGCTTTCAAAACATGGGCTCTTACCTACAAAGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTCCTCTTGCTTTCAAAACATGGGCTCTTACCTACAAAGCCA  50

seq1  TCTCTTCATCCCGAATTCAATCTCTTCTTTACATATATATATATATATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCATCCCGAATTCAATCTCTTCTTTACATATATATATATATATTT  100

seq1  AGTAAACAAGTTCCATGCCATGGCATGCATGTGGAAGCCAGAAGGCAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAACAAGTTCCATGCCATGGCATGCATGTGGAAGCCAGAAGGCAGCT  150

seq1  AGCTAGCAGGAAATGGTTCTTTCCTTCCCACCCAAGAGGCTCTGTGGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGCAGGAAATGGTTCTTTCCTTCCCACCCAAGAGGCTCTGTGGACT  200

seq1  AAACTCAGGCTTTGTGGCAAGTGTCCTTACCCACTGGTCCATCTCTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAGGCTTTGTGGCAAGTGTCCTTACCCACTGGTCCATCTCTCTGT  250

seq1  CCCCTAGTTCAGTCTTCACAGGTTTCTATCATGTTATTAAATCTTCTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAGTTCAGTCTTCACAGGTTTCTATCATGTTATTAAATCTTCTGGC  300

seq1  TAAAACAGTACCTGTCCCTTCCAAAATGGATAGGCATTTCTGCCTATATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAGTACCTGTCCCTTCCAAAATGGATAGGCATTTCTGCCTATATC  350

seq1  TTTTAAAGCAGGCAAACTGGATAGATGAGTGGTGAGAATGCTGACCTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGCAGGCAAACTGGATAGATGAGTGGTGAGAATGCTGACCTTGG  400

seq1  AAAAGCCTTCCCTCTGGCATTCATCTCTGCAGTTCCTCTAGGAGTGCGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCTTCCCTCTGGCATTCATCTCTGCAGTTCCTCTAGGAGTGCGGT  450

seq1  GCTGCTTTGAGTTCTGAGGGAGAGTCAGTTCTCGTGAATTCAATTTGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTTGAGTTCTGAGGGAGAGTCAGTTCTCGTGAATTCAATTTGGAC  500

seq1  TTTCCCATGCCCTCCCTCCAAGGTCAGGAAACCAATAGAAGGTTTCTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCATGCCCTCCCTCCAAGGTCAGGAAACCAATAGAAGGTTTCTGCA  550

seq1  GGCTGCTGTCGAGTATATCTGGTCCAATAATACATTCTGACACTGGGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCTGTCGAGTATATCTGGTCCAATAATACATTCTGACACTGGGGAA  600

seq1  ATAGCCACAGGATATTATGAAACCTAGGAGGCCCAGTACAAAATGCACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCACAGGATATTATGAAACCTAGGAGGCCCAGTACAAAATGCACTC  650

seq1  AGGCTAAAATTCTATTGATCTCCTGACACCATATGCTCCTGTTCTAACCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAAAATTCTATTGATCTCCTGACACCATATGCTCCTGTTCTAACCG  700

seq1  TGGGAGGCAGAGTGTCAGTGCAGGCCCAGTGACAAAAGTCCATTAGCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGCAGAGTGTCAGTGCAGGCCCAGTGACAAAAGTCCATTAGCTGT  750

seq1  TCAAAGGTCTGATGATTTATTCTTTTCCAATGCTCAATTCCTTAGTAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGTCTGATGATTTATTCTTTTCCAATGCTCAATTCCTTAGTAAAA  800

seq1  AGCCATTAGTGATCCATCCGGGCACTGGTGGCGCATGCCTTTAATCCCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTAGTGATCCATCCGGGCACTGGTGGCGCATGCCTTTAATCCCAG  850

seq1  CACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGT  900

seq1  CTGCTGAGTGAGTTCCATATTGGAGGGTGTATGAATTGGCTGCCCTTCAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGAGTGAGTTCCATATTGGAGGGTGTATGAATTGGCTGCCCTTCAC  950

seq1  AGCTTGGCTCTGAAAGCATAGAGCACAGACCAGAATCAGCATCAAGTCCC  1000
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGCTTGGCTCTGAAAGCATAGAGCACAGACCAG-ATCAGCATCAAGTCCC  999

seq1  ATCATGTCCCATCCCATGACGCACTGCTACCAGATAGGACTCATGTCCCT  1050
      ||||||| |||| |||||||||||||||||||||||||||||||||||||
seq2  ATCATGT-CCAT-CCATGACGCACTGCTACCAGATAGGACTCATGTCCCT  1047

seq1  AGCTGGGAACCGAGTG-TTCAAACAAAAGAACCGAT-GGAGCATATTTCT  1098
      |||| ||||||||||| ||| ||||||||||||||| ||||||||||| |
seq2  AGCT-GGAACCGAGTGTTTCCAACAAAAGAACCGATGGGAGCATATTTTT  1096

seq1  ---CATTCAA-TCTATC  1111
         ||||||| ||||||
seq2  CTCCATTCAATTCTATC  1113

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Alignment Information