BAC Information

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BAC

Clone NameB6Ng01-310N20
Chromosome16 (Build37)
Map Location 16,599,719 - 16,600,463
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665682, Mcm4, Prkdc, 2410018G20Rik, Cebpd, 2310008H04Rik, LOC100043266, LOC224010, D16Ertd727e, Pkp2, EG433003, Yars2, Dnm1l, LOC665743, Fgd4
Downstream geneOlfr19, 4933404G15Rik, Spag6, EG665562, EG436405, Vpreb1, Top3b, Ppm1f, LOC100042783, EG623519, Mapk1, Ypel1, Ppil2, 2610318N02Rik, Sdf2l1, LOC623568, Ccdc116, 1810015A11Rik, Ube2l3, Gm603, Hic2, D16Bwg1494e, Pik4ca, Serpind1, Snap29, Crkl, Aifm3, Lztr1, Thap7, 4930451C15Rik, P2rxl1, Slc7a4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310N20.bB6Ng01-310N20.g
ACCGA102729GA102730
length1,198745
definitionB6Ng01-310N20.b B6Ng01-310N20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggaatacacagccaaacatgtgaaggaattgaaaaaaagcat
ccaggatctaaaaatggaagtagaaacaataatgaaatcacaaagggaga
caactctggagatagaaagcctaggaaagaaatcaggagccatagatgca
ttaccaagaatacaaaagatggaagagagaatcttgggtgcagaagattc
cctataaaacatgtacaaaacaataaaagaaaatgcaaaatgcaaaaaga
tcctaactcaagattctaactcaaaacatccaggaaattcaggacacaat
gagaagaacaagcctaaggatattatacctaaggataataggtagagatg
agaatgaagattgccaaattaaagggacagtaaaatatcttcaacaaaat
tgtagaagaaaacttccctaacctaaagaaagagatagccaggaacatac
aagaatcccacagaactccaaatagtttggaccagaaaagaaattcctcc
catcacataataatcaaaacaccaaatgcacaaaacatagaaagattatt
aaaagcagtaagggaaaaaagtcaagtcacatataaaggcagacctatta
gatttacaagagacttctcaccagagactatggaagccagaagccagatg
ttatacagaccataaaagaacaaaaatgccagcccaggctactataccaa
gcaaaactctcaattactatagagggagaaaccaaactattccatgacaa
aaccaaattcacacattatctttccacaaacccagcccttcaaaggataa
taaagtgaaaacaccaacacaggacagaaattatgccctagaaaaagcaa
gaaagtaatcctttaaaaaatctaaaagaagagagccgcaagaacagaat
cccaactctaaaacaaaaataataggaagcaaaattacttttccttaata
tctctaatatcaatggactcaattccccaataaaagacatagactaacag
actggctacataaacagacccaacattttgctgcatacaggaaacccacc
tcagtgacaaagaatagacactaactcagaaataaaacgctgaaaacatt
ttccaagcaaatggtcttagaaacaagatggagtagacatccattcgatg
actgactccagctagctattcaaaagacaagggaaggggccactctca
gaattccggcttctcagtcattttcaaagctgggtttccttacctaaagt
ttgcagcgcggtagcctgggagactttggctcttgaaagtgtggtgagta
acagccagactgttcttccagcatcccagggcgtggtcggtaagtaagct
gatgaggcgtttctgaggttcaggtgagccaggcaggtgcactctgcctt
cccctgggccaatgggcgacgccggtcccccccaagcctcttcggcgctc
gggcgggaccgcgctgcactctggcgattggctgtgcagcgggggcggcc
tgggccggccgctgccggagagtccgacgacggagtcggagcgcaggccc
gggaagcgaggcctgcgcggggagggagcgcagggagtcgcgcaacctgg
acgcgcgcggggcaaggcttgcgggagtgaccgcaggccaccatgaacag
cgagagcgaccataacttcaggcgggtggccatccggcggaagtcaggct
cctacctgccgcccgggatcccccggccctggagcaggccttcgccgcaa
ttgcggcgccttgaccgtgtcgcgcaacccagccaggccgcaggtaatgc
gtgggtgagcggagcgagggcgtgccgcgtgttggggggccggcgggggg
cgtgccgcgcgtgttgggggcgtgacgcctgtgttggggactggcggagg
gcgtgccgcgtgttgggggcttgacggggtgttaggagtggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_16599719_16600463
seq2: B6Ng01-310N20.g_67_811 (reverse)

seq1  CACTCCACTCCTAACACCCCGTCAAGCCCCCAACACGCGGCACGCCCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCACTCCTAACACCCCGTCAAGCCCCCAACACGCGGCACGCCCTCC  50

seq1  GCCAGTCCCCAACACAGGCGTCACGCCCCCAACACGCGCGGCACGCCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTCCCCAACACAGGCGTCACGCCCCCAACACGCGCGGCACGCCCCC  100

seq1  CGCCGGCCCCCCAACACGCGGCACGCCCTCGCTCCGCTCACCCACGCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCGGCCCCCCAACACGCGGCACGCCCTCGCTCCGCTCACCCACGCATT  150

seq1  ACCTGCGGCCTGGCTGGGTTGCGCGACACGGTCAAGGCGCCGCAATTGCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCGGCCTGGCTGGGTTGCGCGACACGGTCAAGGCGCCGCAATTGCG  200

seq1  GCGAAGGCCTGCTCCAGGGCCGGGGGATCCCGGGCGGCAGGTAGGAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAAGGCCTGCTCCAGGGCCGGGGGATCCCGGGCGGCAGGTAGGAGCCT  250

seq1  GACTTCCGCCGGATGGCCACCCGCCTGAAGTTATGGTCGCTCTCGCTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCGCCGGATGGCCACCCGCCTGAAGTTATGGTCGCTCTCGCTGTT  300

seq1  CATGGTGGCCTGCGGTCACTCCCGCAAGCCTTGCCCCGCGCGCGTCCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTGGCCTGCGGTCACTCCCGCAAGCCTTGCCCCGCGCGCGTCCAGG  350

seq1  TTGCGCGACTCCCTGCGCTCCCTCCCCGCGCAGGCCTCGCTTCCCGGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGCGACTCCCTGCGCTCCCTCCCCGCGCAGGCCTCGCTTCCCGGGCC  400

seq1  TGCGCTCCGACTCCGTCGTCGGACTCTCCGGCAGCGGCCGGCCCAGGCCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCTCCGACTCCGTCGTCGGACTCTCCGGCAGCGGCCGGCCCAGGCCG  450

seq1  CCCCCGCTGCACAGCCAATCGCCAGAGTGCAGCGCGGTCCCGCCCGAGCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCGCTGCACAGCCAATCGCCAGAGTGCAGCGCGGTCCCGCCCGAGCG  500

seq1  CCGAAGAGGCTTGGGGGGGACCGGCGTCGCCCATTGGCCCAGGGGAAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAGAGGCTTGGGGGGGACCGGCGTCGCCCATTGGCCCAGGGGAAGGC  550

seq1  AGAGTGCACCTGCCTGGCTCACCTGAACCTCAGAAACGCCTCATCAGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCACCTGCCTGGCTCACCTGAACCTCAGAAACGCCTCATCAGCTT  600

seq1  ACTTACCGACCACGCCCTGGGATGCTGGAAGAACAGTCTGGCTGTTACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACCGACCACGCCCTGGGATGCTGGAAGAACAGTCTGGCTGTTACTC  650

seq1  ACCACACTTTCAAGAGCCAAAGTCTCCCAGGCTACCGCGCTGCAAACTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACACTTTCAAGAGCCAAAGTCTCCCAGGCTACCGCGCTGCAAACTTT  700

seq1  AGGTAAGGAAACCCAGCTTTGAAAATGACTGAGAAGCCGGAATTC  745
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAGGAAACCCAGCTTTGAAAATGACTGAGAAGCCGGAATTC  745