BAC Information

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BAC

Clone NameB6Ng01-311D13
Chromosome16 (Build37)
Map Location 53,411,871 - 53,412,626
singlet/doubletsinglet
Overlap genenone
Upstream geneAlcam, LOC100043430, LOC667895
Downstream geneLOC433027, LOC100043442
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311D13.bB6Ng01-311D13.g
ACCGA102993GA102994
length9571,158
definitionB6Ng01-311D13.b B6Ng01-311D13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaactaaagaagttataataatatcatatatattggttttttg
caatggattattttttaagacttatttattttacacaagtacactgtaac
tgccttcagacacactagaagtcatcagatcatattataaatagttgtga
gccactatgtagttgcttgagttgaacttagaacctctgaaaagcaatca
gtgctcataaccactgagccatctctccagccctacaaattgagtttata
aaagtattaagcattcacgtggaaactgaacaacactcttctcaatgata
cgttggtcaagaaaggaataaagaaagaaattaaagactttttagaattt
aatgaaaatgaagccacaatgtacccaaacctatgggacacaatgaaagc
atttctaagagggaaactcatagctctgagtgcctccaagaagaaacggg
agagagcacatactagcagcttgacaacacatctaaaagctctagaaaaa
aaggaagcaaattcacccaagaggagtagaaagcagaaaataattaaact
caggggtgaaatcaaccaagtggaaacaagaagaactattcaaagaatta
accaaatgaggagttggttctttgaaaaaatcaacaagatagataaaccc
ttagctagactcactaaagggcacagagacaaaatcctaattaacaaaat
cagaactgaaaagggagacataacaacagatcctgaagaaatccaaaaca
ccatcagatccttctacaaaaggctatactcaacaaaactggaaaacctg
gacgaaatggacaaatttctggacagataccaggtaccaaagttgaatca
ggatcaagttgaccatctaaacagtcccatatcacctaagaaatagaagc
agttattactagtctcccagccaaaaaaagcccaggaccagatgggttta
gtgcaga
gaattctttgtttagctctgtaccccatttttaatagggttatttggttt
tctggagtctaactttggaatacctaaggaacaattcacaaaacacgtgc
aacagaagaaggaagaccaaagtgtggattctttggtcctccttagagga
gggaataaaatacccatggaaggagttacagagagaaagtgtgaagcaga
gactgaaggaatgaccacccagagacttccccacctggggattcatccca
tagacaaacaccaaagccagacactatgagggataacaataagagcttgc
tgacaggcacctgatatagctgtctcctgagaggctctgccagtgcctgt
caaatacagaagtccatgttcacagccatccattggacagagcacagggt
ccccaatgaaggagctagagaaagtacccagagaggtgaagggtttgtag
caccataggaggaacaacaatgtgaattaaacagtatctccatagctccc
tgggactaaacctccaaccaaagaaaacacatggttggactcatggccct
agtagaggatggcctagtcggtcatcaatgagaggagaggcccttggtcc
tgtgatggttctatgccccaggataggagaatgtcagggtcaggaagcaa
gagtaggtgagttggtgagcagtcggagggggaaataggatagggggttt
tcagaggggaaactaggaaaggggataacattaaaaatgtaaataaaata
tctaataaaaaagaaaataaaaagatttttaaaacaaaaaagaagaaagg
atgctgaacaccagtatccatcaagacataactctctctgcttcagtcta
agctaactcacagctctactgtcacaggctaccagcactaacgaccaagc
atgtttaatgaaggtgagcatatatccatctacatgtcatttcctgattt
taaaattcttatcagttgtccataatattgacctccattattcactagga
tatttttgattgtacatgctcataagctaatctcccatgtgccattcttt
agtggcataatagtaattttacactcaatgtcatatgtataaagtggtca
agttaaccataatttcgtaaatgcacaattccatactacggaacgtatta
ctccttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_53411871_53412626
seq2: B6Ng01-311D13.b_45_800

seq1  GAATTCAAAACTAAAGAAGTTATAATAATATCATATATATTGGTTTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAACTAAAGAAGTTATAATAATATCATATATATTGGTTTTTTG  50

seq1  CAATGGATTATTTTTTAAGACTTATTTATTTTACACAAGTACACTGTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGATTATTTTTTAAGACTTATTTATTTTACACAAGTACACTGTAAC  100

seq1  TGCCTTCAGACACACTAGAAGTCATCAGATCATATTATAAATAGTTGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCAGACACACTAGAAGTCATCAGATCATATTATAAATAGTTGTGA  150

seq1  GCCACTATGTAGTTGCTTGAGTTGAACTTAGAACCTCTGAAAAGCAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTATGTAGTTGCTTGAGTTGAACTTAGAACCTCTGAAAAGCAATCA  200

seq1  GTGCTCATAACCACTGAGCCATCTCTCCAGCCCTACAAATTGAGTTTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCATAACCACTGAGCCATCTCTCCAGCCCTACAAATTGAGTTTATA  250

seq1  AAAGTATTAAGCATTCACGTGGAAACTGAACAACACTCTTCTCAATGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATTAAGCATTCACGTGGAAACTGAACAACACTCTTCTCAATGATA  300

seq1  CGTTGGTCAAGAAAGGAATAAAGAAAGAAATTAAAGACTTTTTAGAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGGTCAAGAAAGGAATAAAGAAAGAAATTAAAGACTTTTTAGAATTT  350

seq1  AATGAAAATGAAGCCACAATGTACCCAAACCTATGGGACACAATGAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAATGAAGCCACAATGTACCCAAACCTATGGGACACAATGAAAGC  400

seq1  ATTTCTAAGAGGGAAACTCATAGCTCTGAGTGCCTCCAAGAAGAAACGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAAGAGGGAAACTCATAGCTCTGAGTGCCTCCAAGAAGAAACGGG  450

seq1  AGAGAGCACATACTAGCAGCTTGACAACACATCTAAAAGCTCTAGAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGCACATACTAGCAGCTTGACAACACATCTAAAAGCTCTAGAAAAA  500

seq1  AAGGAAGCAAATTCACCCAAGAGGAGTAGAAAGCAGAAAATAATTAAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGCAAATTCACCCAAGAGGAGTAGAAAGCAGAAAATAATTAAACT  550

seq1  CAGGGGTGAAATCAACCAAGTGGAAACAAGAAGAACTATTCAAAGAATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGTGAAATCAACCAAGTGGAAACAAGAAGAACTATTCAAAGAATTA  600

seq1  ACCAAATGAGGAGTTGGTTCTTTGAAAAAATCAACAAGATAGATAAACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAATGAGGAGTTGGTTCTTTGAAAAAATCAACAAGATAGATAAACCC  650

seq1  TTAGCTAGACTCACTAAAGGGCACAGAGACAAAATCCTAATTAACAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTAGACTCACTAAAGGGCACAGAGACAAAATCCTAATTAACAAAAT  700

seq1  CAGAACTGAAAAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACTGAAAAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACA  750

seq1  CCATCA  756
      ||||||
seq2  CCATCA  756