BAC Information

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BAC

Clone NameB6Ng01-312O12
Chromosome16 (Build37)
Map Location 50,884,439 - 50,885,571
singlet/doubletsinglet
Overlap genenone
Upstream geneCd47, EG433024, LOC100043769, LOC628951, EG224180, EG667802, LOC100043404, Bbx, LOC100043414, Ccdc54, LOC672778, 5330426P16Rik
Downstream geneEG639820, LOC627543
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312O12.bB6Ng01-312O12.g
ACCGA104260GA104261
length1,0511,122
definitionB6Ng01-312O12.b B6Ng01-312O12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaaaggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattaaggtaacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtagttactca
gaaaattggacatagtactaccagaggatcccgcaatacctctcctgggc
atatatccagaatatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccataagctggaaagaacccagat
gcccctcaacagaggaattgatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagacaa
atggttggacctggagagcatcatcctgagtgaggtaacccaatcacaaa
agaactcaaatgaaatgtactcactgataagtggatattaacccagaaac
ttagtatagtgagatataaggtacaatatgcaaaacatatgaaactgaag
aagcacgaagaccaaagtgtggacactttgctccttcttagaattggaaa
caatcacccatggaaggagttacagagacaaagtttggagctgagacaaa
aggattgtccatctagagactgccatatccagggatctatcccataatta
gcctccaaacgatgacaccattgcatacactagcaagcctttgttgcaag
gaccgtgatatagctgtctcttgtgagactaggccggggcctagcaaaca
cagaagtggatgctcacagtcaactattggatgggtcacagggcccccaa
tggaggagctagagaaagtatccaatgagctaaagagatatgtaacccta
tcggtggaacacattatgaactaccagtaccccagagctcttgactctag
c
gaattctccctagtcactttcctggctgtttatactctgacttgtcttaa
cacaatgtactattccctcggctgttaatatatttctgtttgtttttatg
ccacagatttctcttcttcattaaaacaaaaatttgttcagtctgtttaa
aaattacctcctttgagaagttttcccaaagccaacaccaaggcttcatt
tgtcattatttaatacaatctgtttcctcaagactggcggctcttctcca
tggtgctgcaattatttgtagacctatttatctttctcgccaccttgtaa
acccactaaaagcagtccatcccttttaggagtttcgtattctttgttgt
ctgatgcagcacaagacacatgcaaagagttcatcagcacagtagaacaa
atgctttgtgtaaatcaccggaagtttctccatggtttgagacggcagca
gatgcttcatgttgagtaggcttctctctgcttccacacaatcaccagag
tgtcagctgtcctattgttaacgttttaaaaataattaaacaatttctgg
tattaaatttaaatgtgcatttgagaagagaatgggagggggaagcagcc
tgtaaaactaaaaatgagataagaagtaattacggaacataatttatttt
ctaaattgagtttgctttgatgaagtgaagcagctcaggagtttctatgg
acagacaatgcaggcttatgaaaggcaacgaggtgcttcaatttctaaaa
ccttccaaggatatttcttcccaatattggcccagaggcaatagagtcac
ttgtttgctcctgtgtattaaattcaattcttcattttatgtctcatttt
gtctgcttgaattttatgatgcatgggtccagttttcaagagaatgtgag
ttcagtctccgcattcttctcaactctatcaaaccctgaggctcttttcc
aaccaagtcattcagcaaattgaatagatcacaagtaagttgtatggacg
gatgagctacgtctttttcttcttcagagacagtctgctctagagatgac
ctgtctgtctgatcacatatttcatgactgtcttggaaaaggagccatat
gttataggtagactacctcctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_50884439_50885571
seq2: B6Ng01-312O12.g_66_1187

seq1  GAATTCTCCCTAGTCACTTTCCTGGCTGTTTATACTCTGACTTGTCTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCTAGTCACTTTCCTGGCTGTTTATACTCTGACTTGTCTTAA  50

seq1  CACAATGTACTATTCCCTCGGCTGTTAATATATTTCTGTTTGTTTTTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGTACTATTCCCTCGGCTGTTAATATATTTCTGTTTGTTTTTATG  100

seq1  CCACAGATTTCTCTTCTTCATTAAAACAAAAATTTGTTCAGTCTGTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGATTTCTCTTCTTCATTAAAACAAAAATTTGTTCAGTCTGTTTAA  150

seq1  AAATTACCTCCTTTGAGAAGTTTTCCCAAAGCCAACACCAAGGCTTCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACCTCCTTTGAGAAGTTTTCCCAAAGCCAACACCAAGGCTTCATT  200

seq1  TGTCATTATTTAATACAATCTGTTTCCTCAAGACTGGCGGCTCTTCTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTATTTAATACAATCTGTTTCCTCAAGACTGGCGGCTCTTCTCCA  250

seq1  TGGTGCTGCAATTATTTGTAGACCTATTTATCTTTCTCGCCACCTTGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCTGCAATTATTTGTAGACCTATTTATCTTTCTCGCCACCTTGTAA  300

seq1  ACCCACTAAAAGCAGTCCATCCCTTTTAGGAGTTTCGTATTCTTTGTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTAAAAGCAGTCCATCCCTTTTAGGAGTTTCGTATTCTTTGTTGT  350

seq1  CTGATGCAGCACAAGACACATGCAAAGAGTTCATCAGCACAGTAGAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGCAGCACAAGACACATGCAAAGAGTTCATCAGCACAGTAGAACAA  400

seq1  ATGCTTTGTGTAAATCACCGGAAGTTTCTCCATGGTTTGAGACGGCAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTGTGTAAATCACCGGAAGTTTCTCCATGGTTTGAGACGGCAGCA  450

seq1  GATGCTTCATGTTGAGTAGGCTTCTCTCTGCTTCCACACAATCACCAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTTCATGTTGAGTAGGCTTCTCTCTGCTTCCACACAATCACCAGAG  500

seq1  TGTCAGCTGTCCTATTGTTAACGTTTTAAAAATAATTAAACAATTTCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCTGTCCTATTGTTAACGTTTTAAAAATAATTAAACAATTTCTGG  550

seq1  TATTAAATTTAAATGTGCATTTGAGAAGAGAATGGGAGGGGGAAGCAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAATTTAAATGTGCATTTGAGAAGAGAATGGGAGGGGGAAGCAGCC  600

seq1  TGTAAAACTAAAAATGAGATAAGAAGTAATTACGGAACATAATTTATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAACTAAAAATGAGATAAGAAGTAATTACGGAACATAATTTATTTT  650

seq1  CTAAATTGAGTTTGCTTTGATGAAGTGAAGCAGCTCAGGAGTTTCTATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTGAGTTTGCTTTGATGAAGTGAAGCAGCTCAGGAGTTTCTATGG  700

seq1  ACAGACAATGCAGGCTTATGAAAGGCAACGAGGTGCTTCAATTTCTAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAATGCAGGCTTATGAAAGGCAACGAGGTGCTTCAATTTCTAAAA  750

seq1  CCTTCCAAGGATATTTCTTCCCAATATTGGCCCAGAGGCAATAGAGTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCAAGGATATTTCTTCCCAATATTGGCCCAGAGGCAATAGAGTCAC  800

seq1  TTGTTTGCTCCTGTGTATTAAATTCAATTCTTCATTTTATGTCTCATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGCTCCTGTGTATTAAATTCAATTCTTCATTTTATGTCTCATTTT  850

seq1  GTCTGCTTGAATTTTATGATGCAT-GGTCCAGTTTTCAAGAGAATGTGAG  899
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTCTGCTTGAATTTTATGATGCATGGGTCCAGTTTTCAAGAGAATGTGAG  900

seq1  TTCAGTCTCCGCATTCTTCTCAACTCTATCAAACCCTGAGGCTCTTTTCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCTCCGCATTCTTCTCAACTCTATCAAACCCTGAGGCTCTTTTCC  950

seq1  AACCAAGTCATTCAGCAAATTGAATAGATCACAAGTAAGTTGTAATGGAA  999
      ||||||||||||||||||||||||||||||||||||||||||| ||||| 
seq2  AACCAAGTCATTCAGCAAATTGAATAGATCACAAGTAAGTTGT-ATGGAC  999

seq1  GGGAAGGAGCTAAGGTCTTTTCCTTC-TCAGAGGACAGTCTGCTCTAAGA  1048
      ||  | ||||| | ||||||| |||| ||||| ||||||||||||||   
seq2  GG--ATGAGCT-ACGTCTTTTTCTTCTTCAGA-GACAGTCTGCTCTA--G  1043

seq1  AGATTGAACTGTTCTGTCCTTGGATCACATATTTCATGACTGTC-TGAAA  1097
      ||| ||| ||| ||||||    |||||||||||||||||||||| || ||
seq2  AGA-TGACCTG-TCTGTC---TGATCACATATTTCATGACTGTCTTGGAA  1088

seq1  AAAGAG-CATATGTTATTTAGGTAGCCCAACCTCCTC  1133
      || ||| |||||||||  |||||||  | ||||||||
seq2  AAGGAGCCATATGTTA--TAGGTAG-ACTACCTCCTC  1122