BAC Information

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BAC

Clone NameB6Ng01-312O14
Chromosome16 (Build37)
Map Location 79,192,398 - 79,328,344
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039561, Cxadr, Btg3, D16Ertd472e, LOC100039605, 4930570E03Rik, Chodl, Prss7
Downstream geneEG383172, 1700066C05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312O14.bB6Ng01-312O14.g
ACCGA104264GA104265
length1,1841,114
definitionB6Ng01-312O14.b B6Ng01-312O14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,327,157 - 79,328,344)(79,192,398 - 79,193,518)
sequence
gaattcttgatttatgaaacaagaatgataacagttcttcaaatatgaac
gaaagaagattatttagttggtgttttactgctataacaatataatataa
acaagtaatatacaatagaaatgtattagaaaagttttgaaatcaaaccc
aaagcacaaacatgtgttgagatcctttgtacttctcccacaattgccag
aagacaaaaatgaagtgagtcgacaaatcaataatagcatcataaattca
ttcatgttgttgaagaatacatagtccctccaccttcaattagatcccaa
gtcagacctgtcatatttgaggttcagtttacaacatgtattaatgttac
acccaagaagaagttcactgtttgactatgtcttaaattgctagatttta
taggagttgaagaataaatgatgggaagagttaatgagaaaagttttgga
atataactcaaataaggatgattataaaactacagtataaataaaattcc
aaggtaaaatattcagagcaagggatttgcccaactcttgtcgaccaatg
accatggatgtttaaatgtatgagtctgaatgctgaggagccaagccaat
aagtcctagaaattgatcaaagttcccagagacaagactctgaatccgat
cccaggtcataaatttttgtttcttttggaatgaattatcttgaccttta
aggtaagaagcgagcctggaggctggctgtgatgagggagtcactggaga
ctgtagagctggacttaatctctacagattgatttttttcactgtaaaaa
gtaaggcagaaaaatctagcaaaagtgaagagaaacaattaaaagcgtgc
cctttaaaaacatccaaattgtgaagtcatttctaagatctgcaggatag
gggatttttcaaaaacataaattaggaggactggacaatactcaagacac
atttcgcacactacatatggtggcagaattcaatccctatatacaaataa
gcctaaatatgaaagacttttagagatgctctaaagtatcgaaaatgaaa
atagatttttttcatattttttattttatacagagtagatatgggaactg
aaaatatttcacacttgaggcagaatagctgactaggccagacaatctta
ttggggtatgacattccagagagaactttacgtt

gaattctctctgtaaattctgtttacagttcataacctcttaaagtatag
agaatgttcaaactcattggggaaaatagtacactcatttatgtatttaa
ataaaagtgctcttttttttcttattcataagagtgagcgacctttgggt
ttctaaagctttaacttcattttctgtacatgctgtgtaattattcactg
aatttcctaccagagatgagtaattatggacttctcacctgtatactcca
ctgcatacacctgatattctattagagctctcatatcctctttcccatcg
acacattaaccaatttttacactacttggtgaagggttacacttttctaa
gtaaacaactttgatttcagttactcagaatattgtgacttttctcacaa
ataaattacttatcacctcacaacttttgtctaatgtttgggagtgcata
atcaaaatattttgggaggaatattattttcataatgcagccagtcaagt
tggaattctgtgataattggatagcttaatatacttctaatatttcagaa
atttatgccatctaatcacttttgaaattgagaaagaattttgggcaaga
tatattttagttataaaagacacatatgaccattgaatgatactttcaaa
ttatatttgatgcacaaattgaaatttaattttcttagcaatgtttaaac
cagagtatccagtgtcagtatcttgaaataacactacagaatagttttcc
cttcaaatttatatttaaatataggaaatcatcctataattcaccatgtg
ttttttagagacacatttttacaaaaatattgtcattattttatgctaat
tactatccaaacatttttgttgtacaaacaatcttttattgtggcatttt
cttatcttatctgcatatagtacaacttgatcatattaatttttcatatt
tcttgctcatatgttcactcaatctaccttgggaccattaatattcttta
aatactacatctttaaatatgccccattatctgaatgtcctttaataata
ctactaagattcacatttaagagaaagaatatggtggaatttttgtctta
aagattaaatattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_79327157_79328344
seq2: B6Ng01-312O14.b_49_1232 (reverse)

seq1  AACGTAA----GTCTCTGG-ATGTCATACACAAATAAGATTGTCTGGCCT  45
      |||||||     ||||||| ||||||||| | ||||||||||||||||||
seq2  AACGTAAAGTTCTCTCTGGAATGTCATACCCCAATAAGATTGTCTGGCCT  50

seq1  AGTTCTGCTATCTTTGCTTCAAGTGTGAAATATTTTCAAGGTTCCAATTA  95
      || || ||||| | ||| ||||||||||||||||||||  ||||| | ||
seq2  AG-TCAGCTAT-TCTGCCTCAAGTGTGAAATATTTTCA--GTTCCCA-TA  95

seq1  TTCTTTCTCTGTATAAAAT-AAAAATATGAAAAAAATCTATTTTCATTTT  144
      |   | ||||||||||||| ||||||||||||||||||||||||||||||
seq2  T--CTACTCTGTATAAAATAAAAAATATGAAAAAAATCTATTTTCATTTT  143

seq1  CGATACCTTTAGAGCATCTTCTTAAAAAGTCTTTCATATTTAGGCTTATT  194
      ||||| |||||||||||| |||  ||||||||||||||||||||||||||
seq2  CGATA-CTTTAGAGCATC-TCT--AAAAGTCTTTCATATTTAGGCTTATT  189

seq1  TGTATATAGGGATTGAATTCTGCCACCATATGTAGTGTGCGAAATGTGTC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATAGGGATTGAATTCTGCCACCATATGTAGTGTGCGAAATGTGTC  239

seq1  TTGAGTATTGTCCAGTCCTCCTAATTTATGTTTTTGAAAAATCCCCTATC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTATTGTCCAGTCCTCCTAATTTATGTTTTTGAAAAATCCCCTATC  289

seq1  CTGCAGATCTTAGAAATGACTTCACAATTTGGATGTTTTTAAAGGGCACG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGATCTTAGAAATGACTTCACAATTTGGATGTTTTTAAAGGGCACG  339

seq1  CTTTTAATTGTTTCTCTTCACTTTTGCTAGATTTTTCTGCCTTACTTTTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATTGTTTCTCTTCACTTTTGCTAGATTTTTCTGCCTTACTTTTT  389

seq1  ACAGTG-AAAAAATCAATCTGTAGAGATTAAGTCCAGCTCTACAGTCTCC  443
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGAAAAAAATCAATCTGTAGAGATTAAGTCCAGCTCTACAGTCTCC  439

seq1  AGTGACTCCCTCATCACAGCCAGCCTCCAGGCTCGCTTCTTACCTTAAAG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTCCCTCATCACAGCCAGCCTCCAGGCTCGCTTCTTACCTTAAAG  489

seq1  GTCAAGATAATTCATTCCAAAAGAAACAAAAATTTATGACCTGGGATCGG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGATAATTCATTCCAAAAGAAACAAAAATTTATGACCTGGGATCGG  539

seq1  ATTCAGAGTCTTGTCTCTGGGAACTTTGATCAATTTCTAGGACTTATTGG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGAGTCTTGTCTCTGGGAACTTTGATCAATTTCTAGGACTTATTGG  589

seq1  CTTGGCTCCTCAGCATTCAGACTCATACATTTAAACATCCATGGTCATTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTCCTCAGCATTCAGACTCATACATTTAAACATCCATGGTCATTG  639

seq1  GTCGACAAGAGTTGGGCAAATCCCTTGCTCTGAATATTTTACCTTGGAAT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGACAAGAGTTGGGCAAATCCCTTGCTCTGAATATTTTACCTTGGAAT  689

seq1  TTTATTTATACTGTAGTTTTATAATCATCCTTATTTGAGTTATATTCCAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATACTGTAGTTTTATAATCATCCTTATTTGAGTTATATTCCAA  739

seq1  AACTTTTCTCATTAACTCTTCCCATCATTTATTCTTCAACTCCTATAAAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTCTCATTAACTCTTCCCATCATTTATTCTTCAACTCCTATAAAA  789

seq1  TCTAGCAATTTAAGACATAGTCAAACAGTGAACTTCTTCTTGGGTGTAAC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCAATTTAAGACATAGTCAAACAGTGAACTTCTTCTTGGGTGTAAC  839

seq1  ATTAATACATGTTGTAAACTGAACCTCAAATATGACAGGTCTGACTTGGG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATACATGTTGTAAACTGAACCTCAAATATGACAGGTCTGACTTGGG  889

seq1  ATCTAATTGAAGGTGGAGGGACTATGTATTCTTCAACAACATGAATGAAT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATTGAAGGTGGAGGGACTATGTATTCTTCAACAACATGAATGAAT  939

seq1  TTATGATGCTATTATTGATTTGTCGACTCACTTCATTTTTGTCTTCTGGC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATGCTATTATTGATTTGTCGACTCACTTCATTTTTGTCTTCTGGC  989

seq1  AATTGTGGGAGAAGTACAAAGGATCTCAACACATGTTTGTGCTTTGGGTT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGGGAGAAGTACAAAGGATCTCAACACATGTTTGTGCTTTGGGTT  1039

seq1  TGATTTCAAAACTTTTCTAATACATTTCTATTGTATATTACTTGTTTATA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCAAAACTTTTCTAATACATTTCTATTGTATATTACTTGTTTATA  1089

seq1  TTATATTGTTATAGCAGTAAAACACCAACTAAATAATCTTCTTTCGTTCA  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTGTTATAGCAGTAAAACACCAACTAAATAATCTTCTTTCGTTCA  1139

seq1  TATTTGAAGAACTGTTATCATTCTTGTTTCATAAATCAAGAATTC  1188
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAAGAACTGTTATCATTCTTGTTTCATAAATCAAGAATTC  1184


seq1: chr16_79192398_79193518
seq2: B6Ng01-312O14.g_68_1181

seq1  GAATTCTCTCTGTAAATTCTGTTTACAGTTCATAACCTCTTAAAGTATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTGTAAATTCTGTTTACAGTTCATAACCTCTTAAAGTATAG  50

seq1  AGAATGTTCAAACTCATTGGGGAAAATAGTACACTCATTTATGTATTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTTCAAACTCATTGGGGAAAATAGTACACTCATTTATGTATTTAA  100

seq1  ATAAAAGTGCTCTTTTTTTTCTTATTCATAAGAGTGAGCGACCTTTGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGTGCTCTTTTTTTTCTTATTCATAAGAGTGAGCGACCTTTGGGT  150

seq1  TTCTAAAGCTTTAACTTCATTTTCTGTACATGCTGTGTAATTATTCACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAGCTTTAACTTCATTTTCTGTACATGCTGTGTAATTATTCACTG  200

seq1  AATTTCCTACCAGAGATGAGTAATTATGGACTTCTCACCTGTATACTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCTACCAGAGATGAGTAATTATGGACTTCTCACCTGTATACTCCA  250

seq1  CTGCATACACCTGATATTCTATTAGAGCTCTCATATCCTCTTTCCCATCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATACACCTGATATTCTATTAGAGCTCTCATATCCTCTTTCCCATCG  300

seq1  ACACATTAACCAATTTTTACACTACTTGGTGAAGGGTTACACTTTTCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTAACCAATTTTTACACTACTTGGTGAAGGGTTACACTTTTCTAA  350

seq1  GTAAACAACTTTGATTTCAGTTACTCAGAATATTGTGACTTTTCTCACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACAACTTTGATTTCAGTTACTCAGAATATTGTGACTTTTCTCACAA  400

seq1  ATAAATTACTTATCACCTCACAACTTTTGTCTAATGTTTGGGAGTGCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTACTTATCACCTCACAACTTTTGTCTAATGTTTGGGAGTGCATA  450

seq1  ATCAAAATATTTTGGGAGGAATATTATTTTCATAATGCAGCCAGTCAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATATTTTGGGAGGAATATTATTTTCATAATGCAGCCAGTCAAGT  500

seq1  TGGAATTCTGTGATAATTGGATAGCTTAATATACTTCTAATATTTCAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTCTGTGATAATTGGATAGCTTAATATACTTCTAATATTTCAGAA  550

seq1  ATTTATGCCATCTAATCACTTTTGAAATTGAGAAAGAATTTTGGGCAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGCCATCTAATCACTTTTGAAATTGAGAAAGAATTTTGGGCAAGA  600

seq1  TATATTTTAGTTATAAAAGACACATATGACCATTGAATGATACTTTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTAGTTATAAAAGACACATATGACCATTGAATGATACTTTCAAA  650

seq1  TTATATTTGATGCACAAATTGAAATTTAATTTTCTTAGCAATGTTTAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTGATGCACAAATTGAAATTTAATTTTCTTAGCAATGTTTAAAC  700

seq1  CAGAGTATCCAGTGTCAGTATCTTGAAATAACACTACAGAATAGTTTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTATCCAGTGTCAGTATCTTGAAATAACACTACAGAATAGTTTTCC  750

seq1  CTTCAAATTTATATTTAAATATAGGAAATCATCCTATAATTCACCATGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAATTTATATTTAAATATAGGAAATCATCCTATAATTCACCATGTG  800

seq1  TTTTTTAGAGACACATTTTTACAAAAATATTGTCATTATTTTATGCTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAGAGACACATTTTTACAAAAATATTGTCATTATTTTATGCTAAT  850

seq1  TACTATCCAAACATTTTTGTTGTACAAACAATCTTTTATTGTGGCATTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATCCAAACATTTTTGTTGTACAAACAATCTTTTATTGTGGCATTTT  900

seq1  CTTATCTTATCTGCATATAGTACAACTTGATCATATTAATTTTTCATATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCTTATCTGCATATAGTACAACTTGATCATATTAATTTTTCATATT  950

seq1  TCTTGCTCATATGTTCACTCAATCTTACCTTGGGACCATTAATATCTTTA  1000
      |||||||||||||||||||||||| ||||||||||||||||||||  || 
seq2  TCTTGCTCATATGTTCACTCAATC-TACCTTGGGACCATTAATATTCTTT  999

seq1  AAATACTTAACATCTTTAAAATATGCCCCATTATCTTGAATGTCCTTTTA  1050
      |||||||  |||||||| ||||||||||||||||| ||||||||| ||||
seq2  AAATACT--ACATCTTT-AAATATGCCCCATTATC-TGAATGTCC-TTTA  1044

seq1  ATAATTACCTACCTAGATTCCACATTTAAGAGAA--GATAT-GTG--ATT  1095
      |||||   ||||  ||||| ||||||||||||||   |||| |||  |||
seq2  ATAAT--ACTACTAAGATT-CACATTTAAGAGAAAGAATATGGTGGAATT  1091

seq1  TTTGTCTTTTAAGGTATTAAATATTT  1121
      ||||||  |||| | |||||||||||
seq2  TTTGTC--TTAAAG-ATTAAATATTT  1114


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