BAC Information

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BAC

Clone NameB6Ng01-314N07
Chromosome16 (Build37)
Map Location 62,368,747 - 62,369,853
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668183
Downstream geneLOC100043806, Nsun3, Arl13b, Stx19, Pros1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-314N07.bB6Ng01-314N07.g
ACCGA105643GA105644
length1,1571,109
definitionB6Ng01-314N07.b B6Ng01-314N07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatcccttaatcatcagggaaatgcaaatcaaaagaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgtggatgtggagaaagaggaacactcctccattgttggt
gggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctc
agaaaattggacatagtactaccagaggatccagcaatacctctcctggg
catatatccagaagatgccccaactggtaagaaggacacattctccacta
tcttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatatggtacatctacacaat
ggagtactactcagctattagaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtatcttgtgagactatgccggggccctagcaaa
cacagaagtggatgctcacagtcagctaatggatgggttcacagggctcc
catgagagctagagaaagtaccccagagctaaagatcttcaccctatagt
ggaacacataatgactacaagtaccctgagctctgactctagctgcatat
gtatcaaaagatgctagtccgcatcactgaagaagagtcatgacatcgct
gaacttgggtgtcagtacagacgtcaggtcatgaggtaattggagtgctc
tataggg
gaattcaaagtcatgtataaaagctacaaaatcaccaacctatgctgaag
aatgaagcaaaattctcagcaattttacattcccataaagtagacccatg
gataaattttattaacatttcttccatctagtattgcctacctactaagc
ctcctggaatatataataatgaatgcaagttttatcacattttaaatatt
aaaaaggaataagaatttactttgatttttggtaagtgatgaatttgctg
caagccaaaatcctgccatgggtaagaaattgatcaactcttttagaata
tttaaacttcaagtaacccttaactatgtcaaatgcaagattaagcagga
atgacaaaacacatcaagatagattagaacatctagactaaatagggtat
attcaaaatatgccctgtcatagaaataaaatataaatataatatatttt
aaattttactctgggtttaacatagtcaaggtttctgaaatatttatttc
catatattcaaagtataatttccccacttttctctcctgatcacatcaaa
ttcattaccatccaactccttatgttcatggcacatgcttttactcttct
ctaatatcaagatggttggttccttccatcaatcctgtttgtattaatgg
atcatatccacattcatcataccccataacatactctccctgaacatgtt
aattaaggagtaatctcacccaacccttcaaactctagagaatacaaaac
aagaatgtcccattatactttctgtgtattttcttcttagagacacgatt
gtgaagtgattttgatttgaggacaaataagaaaaataatagtctgtggc
ctgatgaccatatgctcataagttaagagcacttattcttacaaaggact
caagtttaattgtcaacatcccttaggatggctcacaactgtctatttct
ccagtttcaagggatctgatgtcctcatctgatctccgaggaaaccacac
atacgtaaaaacatacacatataaatgcataaacacataccacacaaaaa
taaaataataattcttttaaaaagaataccatcttgacctatatatttgc
agcacggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_62368747_62369853
seq2: B6Ng01-314N07.g_67_1175

seq1  GAATTCAAAGTCATGTATAAAAGCTACAAAATCACCAACCTATGCTGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGTCATGTATAAAAGCTACAAAATCACCAACCTATGCTGAAG  50

seq1  AATGAAGCAAAATTCTCAGCAATTTTACATTCCCATAAAGTAGACCCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGCAAAATTCTCAGCAATTTTACATTCCCATAAAGTAGACCCATG  100

seq1  GATAAATTTTATTAACATTTCTTCCATCTAGTATTGCCTACCTACTAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATTTTATTAACATTTCTTCCATCTAGTATTGCCTACCTACTAAGC  150

seq1  CTCCTGGAATATATAATAATGAATGCAAGTTTTATCACATTTTAAATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGAATATATAATAATGAATGCAAGTTTTATCACATTTTAAATATT  200

seq1  AAAAAGGAATAAGAATTTACTTTGATTTTTGGTAAGTGATGAATTTGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGAATAAGAATTTACTTTGATTTTTGGTAAGTGATGAATTTGCTG  250

seq1  CAAGCCAAAATCCTGCCATGGGTAAGAAATTGATCAACTCTTTTAGAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCAAAATCCTGCCATGGGTAAGAAATTGATCAACTCTTTTAGAATA  300

seq1  TTTAAACTTCAAGTAACCCTTAACTATGTCAAATGCAAGATTAAGCAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACTTCAAGTAACCCTTAACTATGTCAAATGCAAGATTAAGCAGGA  350

seq1  ATGACAAAACACATCAAGATAGATTAGAACATCTAGACTAAATAGGGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAAAACACATCAAGATAGATTAGAACATCTAGACTAAATAGGGTAT  400

seq1  ATTCAAAATATGCCCTGTCATAGAAATAAAATATAAATATAATATATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAAATATGCCCTGTCATAGAAATAAAATATAAATATAATATATTTT  450

seq1  AAATTTTACTCTGGGTTTAACATAGTCAAGGTTTCTGAAATATTTATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTACTCTGGGTTTAACATAGTCAAGGTTTCTGAAATATTTATTTC  500

seq1  CATATATTCAAAGTATAATTTCCCCACTTTTCTCTCCTGATCACATCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATTCAAAGTATAATTTCCCCACTTTTCTCTCCTGATCACATCAAA  550

seq1  TTCATTACCATCCAACTCCTTATGTTCATGGCACATGCTTTTACTCTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTACCATCCAACTCCTTATGTTCATGGCACATGCTTTTACTCTTCT  600

seq1  CTAATATCAAGATGGTTGGTTCCTTCCATCAATCCTGTTTGTATTAATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATATCAAGATGGTTGGTTCCTTCCATCAATCCTGTTTGTATTAATGG  650

seq1  ATCATATCCACATTCATCATACCCCATAACATACTCTCCCTGAACATGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATCCACATTCATCATACCCCATAACATACTCTCCCTGAACATGTT  700

seq1  AATTAAGGAGTAATCTCACCCAACCCTTCAAACTCTAGAGAATACAAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGGAGTAATCTCACCCAACCCTTCAAACTCTAGAGAATACAAAAC  750

seq1  AAGAATGTCCCATTATACTTTCTGTGTATTTTCTTCTTAGAGACACGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGTCCCATTATACTTTCTGTGTATTTTCTTCTTAGAGACACGATT  800

seq1  GTGAAGTGATTTTGATTTGAGGACAAATAAGAAAAATAATAGTCTGTGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGTGATTTTGATTTGAGGACAAATAAGAAAAATAATAGTCTGTGGC  850

seq1  CTGATGACCATATGCTCATAAGTTAAGAGCACTTATTCTTACAAAGGACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGACCATATGCTCATAAGTTAAGAGCACTTATTCTTACAAAGGACT  900

seq1  CAAGTTTAATTGTCAACAT-CCTTAGGATGGCTCACAACTGTCTATTTCT  949
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CAAGTTTAATTGTCAACATCCCTTAGGATGGCTCACAACTGTCTATTTCT  950

seq1  CCAGTTTCAAGGGATCTGATGTCCTCATCTGATCTCCGAGGAAACCACAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTTCAAGGGATCTGATGTCCTCATCTGATCTCCGAGGAAACCACAC  1000

seq1  ATACGT-AAAACATACACATATAAATGCATAAAACACATAACACACAAAA  1048
      |||||| ||||||||||||||||||||||| ||||||||| ||||| |||
seq2  ATACGTAAAAACATACACATATAAATGCAT-AAACACATACCACAC-AAA  1048

seq1  AATAAAAATAAATAAATC-TTTAAAAAGATAACCATC-TGAACTATATA-  1095
      |||||||   ||||| || ||||||||||  |||||| ||| ||||||| 
seq2  AATAAAA--TAATAATTCTTTTAAAAAGAATACCATCTTGACCTATATAT  1096

seq1  -TGCAGCACGGAC  1107
       ||||||||||||
seq2  TTGCAGCACGGAC  1109