BAC Information

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BAC

Clone NameB6Ng01-315E05
Chromosome16 (Build37)
Map Location 69,147,569 - 69,148,447
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626609
Downstream geneSpeer2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-315E05.bB6Ng01-315E05.g
ACCGA105959GA105960
length933878
definitionB6Ng01-315E05.b B6Ng01-315E05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaaatcatctggaaaggcaataaataaataaataaataattt
aaaaaccccagaataacaaaaacatttctttatttttttctttttttaat
gtatttattttattaggtattttcctcgtttacattttcaatgctatccc
aaaggtcccccatacccacccccccccaatcccctacccacccactcccc
ctttttggctctggcgttcccctgtactggggcatataaagtttgcaagt
ccaatgggcctctctttgcagtgatggccgactaggacatcttttgatac
atatgcagctagagacaagagctccggggtactggttagttcatattgtt
gttcaacctatagggttgccgttccctttagctctttgggtaatttttct
agctcctccattgggggccgtgtgacccatccaatagctgactgtgatca
tccacttctgtgtttgctaggccccagcatagtctcacaagagagagcta
tatctgggtcctttcagcaaaatcttgctagtgtatgcaatggtgtcagc
atttggaagctgattatgggatggatccctgcatatgtcaatcactagat
ggtccatcctttcgtctcagctccaaattttgtctctgtaactccttcca
tcggtgttttattcccatttctaagagagggtaaagtgtccacactttgg
tcttcgttcttcttgaatttcatgcgtttggcaagttgtatcttatatct
tgagtatccaaagtttcttggctaatatccacttatcagtgagtacatat
tgtgcgagttcctttgtgattgggtttacctcactcaggatgataccctc
caggtccacccatttgcctaggaatttcataaattcatttttttaatagc
tgagtagtattccattgtgtaaatgtaccacat
tatttttctacacacaaacataaatatcacattggctgggaataaagttt
ctcagttacacctaacaacttttagaactttgacatttcatcctgtgtaa
acatttcataaatccttgacctgatcctatggatcactctgtagcaattg
ttcttagtgacaattctttctgtagtcttctgtgctcttgtaactttgat
tgcatgtcaagaattcaatatggagcaaagtattttttaacatgatgtta
ctgagtctaagacaataaaatccatcagtaataacctccataatgactga
cagaattgattgtctatcaacaccatcatggtttctcatcagaaagaatc
tagagtcagggcagcatctgtcattgcaggaatttcaagggcattttctt
gagttttttttgcagtttcattctttttatataaaatatttctgagtaac
tgatactgaattttcctgaatgtgtatatatatgaatatatgtgtgtgtg
tgtgtgtgtagtaataatatattttgaatttataaagaaacatatatttt
cctggctgaaaaaactgggaccatgtctatgtatagtatattttgattat
cttctagatatatatatctgcagtctgcctcttttttcaaatgtgcaaaa
acagagacattttttaatatctaatctgatttttatgtcaattttttagc
catatcgatattgattgtaattttatactaatataaaaaagtaaaattga
atacaattttatgtattatattacatattacattgattatatcaacacct
atttcccttgcataactgatgatcagtgtatatttaagttacattctact
tattcattcgagtatatatggaagaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_69147569_69148447
seq2: B6Ng01-315E05.g_71_948 (reverse)

seq1  TTTTC-TCCATATATACTCTGAATTGAATAAGTAGAATGTAACTTAAATA  49
      ||||| ||||||||||||| ||| ||||||||||||||||||||||||||
seq2  TTTTCTTCCATATATACTC-GAA-TGAATAAGTAGAATGTAACTTAAATA  48

seq1  TACACTGATCATCAGTTATGCAAGGAAATAAGTTGTTGATATAATCAATT  99
      ||||||||||||||||||||||||| ||  || ||||||||||||||| |
seq2  TACACTGATCATCAGTTATGCAAGGGAAATAGGTGTTGATATAATCAA-T  97

seq1  GTAATAATGTAATATAATACATAAAATTGTATTCAATTTTACTTTTTTAT  149
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAT-ATGTAATATAATACATAAAATTGTATTCAATTTTACTTTTTTAT  146

seq1  ATTAGTATAAAATTACAATCAATATCGATATGGCTAAAAAATTGACATAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTATAAAATTACAATCAATATCGATATGGCTAAAAAATTGACATAA  196

seq1  AAATCAGATTAGATATT-AAAAATGTCTCTGTTTTTGCACATTTGAAAAA  248
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAATCAGATTAGATATTAAAAAATGTCTCTGTTTTTGCACATTTGAAAAA  246

seq1  AGAGGCAGACTGCAGATATATATATCTAGAAGATAATCAAAATATACTAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGACTGCAGATATATATATCTAGAAGATAATCAAAATATACTAT  296

seq1  ACATAGACATGGTCCCAGTTTTTTCAGCCAGGAAAATATATGTTTCTTTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGACATGGTCCCAGTTTTTTCAGCCAGGAAAATATATGTTTCTTTA  346

seq1  TAAATTGAAAATGAAGTA-AAATACACACACACACACACACATATATTCA  397
      |||||| |||||  | ||  | ||||||||||||||||||||||||||||
seq2  TAAATTCAAAATATATTATTACTACACACACACACACACACATATATTCA  396

seq1  TATATATACACATTCAGGAAAATTCAGTATCAGTTACTCAGAAATATTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATACACATTCAGGAAAATTCAGTATCAGTTACTCAGAAATATTTT  446

seq1  ATATAAAAAGAATGAAACTGCAAAAAAAACTCAAGAAAATGCCCTTGAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAAAGAATGAAACTGCAAAAAAAACTCAAGAAAATGCCCTTGAAA  496

seq1  TTCCTGCAATGACAGATGCTGCCCTGACTCTAGATTCTTTCTGATGAGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCAATGACAGATGCTGCCCTGACTCTAGATTCTTTCTGATGAGAA  546

seq1  ACCATGATGGTGTTGATAGACAATCAATTCTGTCAGTCATTATGGAGGTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGATGGTGTTGATAGACAATCAATTCTGTCAGTCATTATGGAGGTT  596

seq1  ATTACTGATGGATTTTATTGTCTTAGACTCAGTAACATCATGTTAAAAAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGATGGATTTTATTGTCTTAGACTCAGTAACATCATGTTAAAAAA  646

seq1  TACTTTGCTCCATATTGAATTCTTGACATGCAATCAAAGTTACAAGAGCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGCTCCATATTGAATTCTTGACATGCAATCAAAGTTACAAGAGCA  696

seq1  CAGAAGACTACAGAAAGAATTGTCACTAAGAACAATTGCTACAGAGTGAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGACTACAGAAAGAATTGTCACTAAGAACAATTGCTACAGAGTGAT  746

seq1  CCATAGGATCAGGTCAAGGATTTATGAAATGTTTACACAGGATGAAATGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGGATCAGGTCAAGGATTTATGAAATGTTTACACAGGATGAAATGT  796

seq1  CAAAGTTCTAAAAGTTGTTAGGTGTAACTGAGAAACTTTATTCCCAGCCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTCTAAAAGTTGTTAGGTGTAACTGAGAAACTTTATTCCCAGCCA  846

seq1  ATGTGATATTTATGTTTGTGTGTAGAAAAATA  879
      ||||||||||||||||||||||||||||||||
seq2  ATGTGATATTTATGTTTGTGTGTAGAAAAATA  878