BAC Information

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BAC

Clone NameB6Ng01-317K24
Chromosome16 (Build37)
Map Location 36,837,682 - 36,838,812
singlet/doubletsinglet
Overlap geneEaf2, Iqcb1
Upstream geneParp14, LOC667133, LOC100043217, Dtx3l, Parp9, Kpna1, Wdr5b, 2310056P07Rik, Ccdc58, Csta, Stfa2l1, EG433016, EG627962, EG408196, 2010005H15Rik, Stfa1, EG209324, LOC100038854, BC100530, LOC639105, Stfa2, Stfa3, Casr, EG667232, Cd86, Ildr1, LOC667246, Slc15a2, LOC667023
Downstream geneLOC628101, Golgb1, Hcls1, Fbxo40, LOC100043252, Polq, Stxbp5l, Gtf2e1, Rabl3, Hgd, Ndufb4, LOC100043709, Fstl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317K24.bB6Ng01-317K24.g
ACCGA107769GA107770
length1,1771,127
definitionB6Ng01-317K24.b B6Ng01-317K24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccaatttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattagatattagcccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttatcgattcttgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatatcttcgaggcttttccctac
tttctcctctataagtttcagtgtcactggttttatgtggagttccttaa
tccacttaaatttgaccttagtacaaggagatagaaatggatcaattcgc
attcttctacatgataactgccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcaaagatcaagt
gacaataggtgtgtggattcatctctgggtcttcaattctgttccattgg
tctacttgtctgtcactataccagtaccatgcagttttgatcacaattgc
tctgtagtacagttttaggtccggcatggtgattccaacagaagttcttt
tatccttgagaagagtttttgctatcctcggctttttgttattccagatg
aatctgccgattgccctttctaatttgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatggaagatctttccatctt
ctgagatcttctttaatttctttctttagagactgaagttcttatcatac
agatctttcacttccttagttagagtcacgccaaggtatttatattattt
gtgactattgagaaggtgttgtttcctaattctttctcagctgtttactt
tgtgtacagaaaggcattgacttgtttgagtaatttatattcagctactt
catgagctgtttatcagcctagagtctctgtggattttaggtcacttata
tctatcatacatctgcaaaaggtattgactctcgttccaatgtaatcctg
atatccgtattggtgaccgatatgctc
gaattcaatgacatatagaatctaaaacaagctcatctcctagaagttga
gacttgaaaactggttaccagaggctagggataatagaagaggaaagatg
agagaaagtttaacaatgggtattttgtaatatttagtttaaggtatttt
atgtcatatgggatgattatatatgataatggtaaacctttactttaaaa
aagaatagttttattttgaatattaaagaaattagtaaatagttgtctca
ttattctgacattcatataaactcaattctattgagaaaactgcaagctc
atatagtttatagcaactcctaattagccattaagagaattatagactag
aaatggctcatggccttaggacttgggaagttgattcagtaggactgctc
agtcccaagccagcctgggctactgagtgaattacctgaaaatcagcaca
agacaggtttacttaacgtatatgatataatcagaaatgtaatgtgcata
ggaaagaatagagatagaaagaccaattgagatagatttttttcccccat
tttttcctaggatagagcttcactatgcagcccaaataatgttaaactca
cactcttcctgcctcagtcttttgactgctggaacatagattcccatcat
tacaccttgctaaaaggaggctttttatgagtgaagtatttcttgatcat
gagtcagacaggccaatttctgggagtttgaggccagtctagtccgttta
gaattccaggttcagccaggtaatgaaaccctgtctcaaaattcaaaaca
aatatatatggtagctcacaacctcctataattgacgaccttctcttctg
gcctcctcaggcaacgcttagatgtgatgcgcatttatatacacgcatgg
aaaaacactcatacatattaaataaacgaatggaattcaatgagaaattt
aacaatatggacaataataagaaatattgtgcaagaagatttacctcaga
gatcatatattctacatctggaaatttggtggccatagcctacttggaag
cttccagaaaattttaagaatttgaatttgtggggtagatataaaattgg
tagaacatatattagaatgttctagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_36837682_36838812
seq2: B6Ng01-317K24.g_68_1194

seq1  GAATTCAATGACATATAGAATCTAAAACAAGCTCATCTCCTAGAAGTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGACATATAGAATCTAAAACAAGCTCATCTCCTAGAAGTTGA  50

seq1  GACTTGAAAACTGGTTACCAGAGGCTAGGGATAATAGAAGAGGAAAGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGAAAACTGGTTACCAGAGGCTAGGGATAATAGAAGAGGAAAGATG  100

seq1  AGAGAAAGTTTAACAATGGGTATTTTGTAATATTTAGTTTAAGGTATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAGTTTAACAATGGGTATTTTGTAATATTTAGTTTAAGGTATTTT  150

seq1  ATGTCATATGGGATGATTATATATGATAATGGTAAACCTTTACTTTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATATGGGATGATTATATATGATAATGGTAAACCTTTACTTTAAAA  200

seq1  AAGAATAGTTTTATTTTGAATATTAAAGAAATTAGTAAATAGTTGTCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAGTTTTATTTTGAATATTAAAGAAATTAGTAAATAGTTGTCTCA  250

seq1  TTATTCTGACATTCATATAAACTCAATTCTATTGAGAAAACTGCAAGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTGACATTCATATAAACTCAATTCTATTGAGAAAACTGCAAGCTC  300

seq1  ATATAGTTTATAGCAACTCCTAATTAGCCATTAAGAGAATTATAGACTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTTTATAGCAACTCCTAATTAGCCATTAAGAGAATTATAGACTAG  350

seq1  AAATGGCTCATGGCCTTAGGACTTGGGAAGTTGATTCAGTAGGACTGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCTCATGGCCTTAGGACTTGGGAAGTTGATTCAGTAGGACTGCTC  400

seq1  AGTCCCAAGCCAGCCTGGGCTACTGAGTGAATTACCTGAAAATCAGCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCAAGCCAGCCTGGGCTACTGAGTGAATTACCTGAAAATCAGCACA  450

seq1  AGACAGGTTTACTTAACGTATATGATATAATCAGAAATGTAATGTGCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGTTTACTTAACGTATATGATATAATCAGAAATGTAATGTGCATA  500

seq1  GGAAAGAATAGAGATAGAAAGACCAATTGAGATAGATTTTTTTCCCCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAATAGAGATAGAAAGACCAATTGAGATAGATTTTTTTCCCCCAT  550

seq1  TTTTTCCTAGGATAGAGCTTCACTATGCAGCCCAAATAATGTTAAACTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTAGGATAGAGCTTCACTATGCAGCCCAAATAATGTTAAACTCA  600

seq1  CACTCTTCCTGCCTCAGTCTTTTGACTGCTGGAACATAGATTCCCATCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTCCTGCCTCAGTCTTTTGACTGCTGGAACATAGATTCCCATCAT  650

seq1  TACACCTTGCTAAAAGGAGGCTTTTTATGAGTGAAGTATTTCTTGATCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCTTGCTAAAAGGAGGCTTTTTATGAGTGAAGTATTTCTTGATCAT  700

seq1  GAGTCAGACAGGCCAATTTCTGGGAGTTTGAGGCCAGTCTAGTCCGTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGACAGGCCAATTTCTGGGAGTTTGAGGCCAGTCTAGTCCGTTTA  750

seq1  GAATTCCAGG-TCAGCCAGGTAATGAAACCCTGTCTCAAAATTCAAAACA  799
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTTCAGCCAGGTAATGAAACCCTGTCTCAAAATTCAAAACA  800

seq1  AATATATATGGTAGCTCACAACCTCCTATAATTGACGACCTTCTCTTCTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATATGGTAGCTCACAACCTCCTATAATTGACGACCTTCTCTTCTG  850

seq1  GCCTCCTCAGGCAACGCTTAGATGTGATGCGCATTTATATACACGCATGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTCAGGCAACGCTTAGATGTGATGCGCATTTATATACACGCATGG  900

seq1  AAAAACACTCATACATATTAAAAATAAAACGAATGGAATTCAATGAGAAA  949
      ||||||||||||||||||||||    ||||||||||||||||||||||||
seq2  AAAAACACTCATACATATTAAA---TAAACGAATGGAATTCAATGAGAAA  947

seq1  TTTAACAATATGGACAAT-ATAAGAAATATTGTTGGCAGAAGATTTAACT  998
      |||||||||||||||||| ||||||||||||| ||  |||||||||| ||
seq2  TTTAACAATATGGACAATAATAAGAAATATTG-TGCAAGAAGATTTACCT  996

seq1  CAGAGATCATATATTCTACATCTGGAATTTTGGTGGCCATTAGCCTACTT  1048
      ||||||||||||||||||||||||||| ||||||||||| ||||||||||
seq2  CAGAGATCATATATTCTACATCTGGAAATTTGGTGGCCA-TAGCCTACTT  1045

seq1  GGAAGCTTTCAAGAAAATTTTTAAGAATTTGATATTTGT-GGGTAG-TAT  1096
      |||||| ||| |||||| |||||||||||||| |||||| |||||| |||
seq2  GGAAGC-TTCCAGAAAA-TTTTAAGAATTTGA-ATTTGTGGGGTAGATAT  1092

seq1  AAAATATGGTAGGACATATATTAG-ATGTTCTAGCC  1131
      ||||| |||||| ||||||||||| |||||||||||
seq2  AAAAT-TGGTAGAACATATATTAGAATGTTCTAGCC  1127