BAC Information

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BAC

Clone NameB6Ng01-318C24
Chromosome16 (Build37)
Map Location 51,842,878 - 51,843,960
singlet/doubletsinglet
Overlap genenone
Upstream geneEG639820, LOC627543
Downstream geneCblb, Alcam
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318C24.bB6Ng01-318C24.g
ACCGA108140GA108141
length1,1721,073
definitionB6Ng01-318C24.b B6Ng01-318C24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtttaccttcttgagttctttatatatattggatattagtccc
ctatccaatttgggataggtaaagattctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttattgattcttgatcttacagcacaagccattgctgtt
ccattcaggaatttttcaatacctctcctgggcatatatccagaagatgt
cccaaccagtaacgacacatgctccactatgttcatagcagccttgttta
taatagccagaagctggaaagaacccagatgcccctcaacagaggaatgg
atacagaaaatatggtacatttacacaatgaaatactactcagcttttaa
aaaaaatgaatttatgaaattcctaggcaaatggatggacctggagggta
tcatcctgagtgaggtaacccaatcacaaaggaactcgcacaatatgtac
tcactgataagtggatattagcccagaaacttaggatacccaagatataa
gatacaacttgccaaacgcatgaaattcaagaagaatgaagaccaaaatg
tggacactttaccctttcttagaaatgggaacaaaacacccatggaagga
attacagagacaaaatttggagctgtgacgaaaggatggaccatctagtg
attgccatatgcagggatccatcccataatcaggttccaaatgctgacac
cattgcatacactagcaagattttgctgaaaggacccagatatagctctc
tcttgtgagactatgctgaggcctagcaaacacagaagtggatgatcaca
gtcagctattggatgggtcactcggcccccaatggaggagctagagaaat
tacccaaggagctaatggaactgcactctatagtgaacacatatgaacta
accagtactcgagcttctttgttctctagctgatatgttatcaaaagatg
gcctagtccggcatcactgccaagagagagggtccaattgaacctgcaac
tttatatatgctccagttaatggaacgtcaggtctaaaatggggactgag
tgtgggtcatgaggggagaatc
gaattcttggctcataaggagtagcactattaggaggtgtctcatattgg
aaggtacaggggtggggctttgaggtttcctatgctcaaactacccccag
tatgacacagtctcctttaatgcctttggataaagatgtagaactctcag
ctcctccagcaacatgtcttcctgcatgccaccatatttcctgccatgac
aataatgctctaaacctctgaaactgtaatccagtctccaactaaatgtt
tttctttataagagttgctctggtcatggtgtctcatcacagcaataaaa
ccctaactaaggcagttatctaatcccaagtgttcagccctgaatacaca
cacacacacacacacacacacacacacacacacacacacacacacacaca
aacacagacacaccagttaatggactcagcactttttatttacgtatact
tttagatttgtaaggacaataattaaagaagagcaggtccataatttttc
aaggtgttaggggacataagaagagttgtaggtggaagagagaggggagg
atatgacataaatacagtatttgtgtctgcaactctccaaaaatatttca
aaatttaaataaaaatagtcttatacatgagaaggaatattaaggtattt
gagcaaagtgcaattttcactcagttttgaaaaagtatcttttaaaaaaa
tgctattttatatatttacattccagtcattgcccttccctcttgttcgc
ccctcccatagtttctcatcacattcctcttcccccttgcctccaaaagg
ctgctccccaccccaccaggcctcccccttccctgggtgcctcaagtctt
tccaggattaagctcattttcccccactaaggccagaccagtctgacctc
tgctatatatgtgctagggaccttggactgtctgtgtatgctcctggtta
gcgctcatctctgggggctttcctggcgtctggataggtgaactgctggt
cttcctatgagtgccctccctcagctccatcattctcccctaataactca
aattaaaaatgttgtacagagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_51842878_51843960
seq2: B6Ng01-318C24.g_65_1137 (reverse)

seq1  AGCTCTGTACACATTTTTTAAATTGAGTTAATTAGGGGAAGGAATGATGG  50
      |||||||||||   ||||||| ||||||| |||||||||  |||||||||
seq2  AGCTCTGTACAACATTTTTAATTTGAGTT-ATTAGGGGA--GAATGATGG  47

seq1  AGCTGAAGGGAAGGGCAACCTCATAGGAAGACCAGCAGTTTCAACTAACC  100
      ||||||  || ||||||  ||||||||||||||||||| |||| || | |
seq2  AGCTGA--GGGAGGGCA--CTCATAGGAAGACCAGCAG-TTCACCT-ATC  91

seq1  CAGACGCCAGG-AAGCCCCCAGAGATTGAGCCGCTAACCAGGAGCATACA  149
      ||||||||||| ||||||||||||| |||| |||||||||||||||||||
seq2  CAGACGCCAGGAAAGCCCCCAGAGA-TGAG-CGCTAACCAGGAGCATACA  139

seq1  CAGGCCAGTCCAAGGTCCCTAGCACATATATAGCAGAGGTCAGACTGGTC  199
      || | |||||||||||||||||||||||||||||||||||||||||||||
seq2  CA-GACAGTCCAAGGTCCCTAGCACATATATAGCAGAGGTCAGACTGGTC  188

seq1  TGGCCTTAGTGGGGGAAAATGAGCTTAATCCTGGAAAGACTTGAGGCA-C  248
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGGCCTTAGTGGGGGAAAATGAGCTTAATCCTGGAAAGACTTGAGGCACC  238

seq1  CAGGGAAGGGGGAGGCCTGGTGGGGTGGGGAGCAGCCTTTTGGAGGCAAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAAGGGGGAGGCCTGGTGGGGTGGGGAGCAGCCTTTTGGAGGCAAG  288

seq1  GGGGAAGAGGAATGTGATGAGAAACTATGGGAGGGGCGAACAAGAGGGAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGAGGAATGTGATGAGAAACTATGGGAGGGGCGAACAAGAGGGAA  338

seq1  GGGCAATGACTGGAATGTAAATATATAAAATAGCATTTTTTTAAAAGATA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAATGACTGGAATGTAAATATATAAAATAGCATTTTTTTAAAAGATA  388

seq1  CTTTTTCAAAACTGAGTGAAAATTGCACTTTGCTCAAATACCTTAATATT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCAAAACTGAGTGAAAATTGCACTTTGCTCAAATACCTTAATATT  438

seq1  CCTTCTCATGTATAAGACTATTTTTATTTAAATTTTGAAATATTTTTGGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCATGTATAAGACTATTTTTATTTAAATTTTGAAATATTTTTGGA  488

seq1  GAGTTGCAGACACAAATACTGTATTTATGTCATATCCTCCCCTCTCTCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGCAGACACAAATACTGTATTTATGTCATATCCTCCCCTCTCTCTT  538

seq1  CCACCTACAACTCTTCTTATGTCCCCTAACACCTTGAAAAATTATGGACC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTACAACTCTTCTTATGTCCCCTAACACCTTGAAAAATTATGGACC  588

seq1  TGCTCTTCTTTAATTATTGTCCTTACAAATCTAAAAGTATACGTAAATAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTCTTTAATTATTGTCCTTACAAATCTAAAAGTATACGTAAATAA  638

seq1  AAAGTGCTGAGTCCATTAACTGGTGTGTCTGTGTTTGTGTGTGTGTGTGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCTGAGTCCATTAACTGGTGTGTCTGTGTTTGTGTGTGTGTGTGT  688

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTCAGGGCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTCAGGGCT  738

seq1  GAACACTTGGGATTAGATAACTGCCTTAGTTAGGGTTTTATTGCTGTGAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTTGGGATTAGATAACTGCCTTAGTTAGGGTTTTATTGCTGTGAT  788

seq1  GAGACACCATGACCAGAGCAACTCTTATAAAGAAAAACATTTAGTTGGAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACACCATGACCAGAGCAACTCTTATAAAGAAAAACATTTAGTTGGAG  838

seq1  ACTGGATTACAGTTTCAGAGGTTTAGAGCATTATTGTCATGGCAGGAAAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGATTACAGTTTCAGAGGTTTAGAGCATTATTGTCATGGCAGGAAAT  888

seq1  ATGGTGGCATGCAGGAAGACATGTTGCTGGAGGAGCTGAGAGTTCTACAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGCATGCAGGAAGACATGTTGCTGGAGGAGCTGAGAGTTCTACAT  938

seq1  CTTTATCCAAAGGCATTAAAGGAGACTGTGTCATACTGGGGGTAGTTTGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCCAAAGGCATTAAAGGAGACTGTGTCATACTGGGGGTAGTTTGA  988

seq1  GCATAGGAAACCTCAAAGCCCCACCCCTGTACCTTCCAATATGAGACACC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGGAAACCTCAAAGCCCCACCCCTGTACCTTCCAATATGAGACACC  1038

seq1  TCCTAATAGTGCTACTCCTTATGAGCCAAGAATTC  1083
      |||||||||||||||||||||||||||||||||||
seq2  TCCTAATAGTGCTACTCCTTATGAGCCAAGAATTC  1073