BAC Information

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BAC

Clone NameB6Ng01-319P18
Chromosome16 (Build37)2 (Build37)
Map Location 67,998,721 - 67,999,001139,185,152 - 139,186,315
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneCadm2, 9330155M09Rik
Downstream geneEG626609
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319P18.bB6Ng01-319P18.g
ACCGA109479GA109480
length9021,161
definitionB6Ng01-319P18.b B6Ng01-319P18.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(67,998,721 - 67,999,001)(139,185,152 - 139,186,315)
sequence
gaattccatttttataccctactttgactttcatatttctctcagctgac
ttcgttattaaccattttcttcaaattaacaagtttattcatgtcctttt
tttctttgaacatttttgaatttttgttgttattttttatatttagaatt
tcatctgactcattctcattaggaccattattttggaactggtaatttgt
ggagatgtcttgtctttgtttttcttctttttgcgttgagaattgtagtg
attgttggttgaattttcattgaagtgagcttcatttcttttcagtgttc
aagaagaactatgatgcggtagtgtcaaggtgtcattttccttaattagt
gctcagggcaccgtgcttgattcccagtgtcttacttagtgtttcattgc
tgtgaacacataccataagcacagtaactcttataaaggaaaacatttac
ttggatctggcttacttatgaaatcttgtccaactttgctctttcttaga
attggaaacaatcagccatggaaggagttacagagacaaagtttggagct
gaggcaaaaggatggaccatctagagactgccatatccagggatccatcc
cataattagcctccaaacgatgacaccattgcatacactagcaagccttt
gttgcaaggaccatgatatagctgtcccttgtgagactaggctggggact
agcaaacacagaagtggatgctcacagtcaactattcgatggatcacagg
gcccccaatggaggagctagagaaagtatccatggagctaaagagatctg
cgaccctatcggtggaacaacattatgaactaaccagtaccccagagctc
ttgactctagctgcatatgtatcaaaagatgacctagtcggccatcactg
ca

gaattctcctcatgacacacttttcatggacacaaaataagaaagaatat
aattgaagtattgctttgcagttctacagccactcgcctaaatcaagtga
ttcagcccagacaatcccaggttacaacatgaaccttaacgagagagaca
agacataaggtgttgaactgggaagtgataggttctgcctctgttgggtt
tccctgtttccctggtcctggaatctcagagtccctgtgagccttccaat
gaatcacatgctctcaaattagtgaatttcttcctgtaactaagagacca
gtaagtaaggagtgatagaaaaagacataatttttgagagctgaaaggaa
accatgcaccgaatgtagaatggcaaaaaatcagacttgacacctgagag
aagtagcttatcattgccagggagtaggttcagataggaagctatagggc
atccctccattacaccctttccctgatggaataaaccctgtttcagtaca
aaggtaacaccatgtgatatttttgtgaaaattgactcacatatgaattt
ggaactagggagtatcacttgaagaaagtctggggcccaggagaccttca
ttatctgtaaatcaatacatggaaacacagggttaaggtgtctagataaa
gtgtgccccagtggttggtgtattaaaggcttggttgccagctgatgaag
cctcagggaagcaatcgaatgagtagggttctgactctatcagtggttca
taatttgaagtcactgttgaaactactagaaactaagaggtagcacctca
ttggaggatgaaaattattgagttctgcacttgaaaattctctttccttc
cctccctcccttcctcctccccttctccctttctccctctccctccctct
tcctccctctccctctctcctgtcctccttccttcttggattctatgaag
tgaatagtattacccagctattttctgctgtcctgatgtgtgtcttcacc
atatcccagaaacaagagactttcagtagaaaaagaaaataggcgccctt
gatctattgttcttcaattatttaaatcccaacaaggaaaagtacctagc
atagatgggactcattcttctggtccctcatgatggactagctcgattgt
agagctcgagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_67998721_67999001
seq2: B6Ng01-319P18.b_626_906 (reverse)

seq1  AGAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAATGTTGTTCAACTGA  50
      |||||||||||||||||||||||||||||||||||||||||||| || ||
seq2  AGAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAATGTTGTTCCACCGA  50

seq1  TAGGGTTGCAGATCTCTTTAGCTCCTTGGATACTTTCTCTAGCTCCTCCA  100
      |||||| |||||||||||||||||| ||||||||||||||||||||||||
seq2  TAGGGTCGCAGATCTCTTTAGCTCCATGGATACTTTCTCTAGCTCCTCCA  100

seq1  TTGGGGGCCCTGTGATCCATCCAATAGTTGACTGTGAGCATCCACTTCTG  150
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTGGGGGCCCTGTGATCCATCGAATAGTTGACTGTGAGCATCCACTTCTG  150

seq1  CGTTAGCTAGGCCCCGGCCTAGTCTCACAAGGGACAGCTATATCACTGTC  200
       ||| ||||| |||| |||||||||||||||||||||||||||||  |||
seq2  TGTTTGCTAGTCCCCAGCCTAGTCTCACAAGGGACAGCTATATCATGGTC  200

seq1  CTTGCAACAAAGGCTTGTTAGTGTATGCCATGGTGTCATCGTTTGGAGGC  250
      ||||||||||||||||| |||||||||| |||||||||||||||||||||
seq2  CTTGCAACAAAGGCTTGCTAGTGTATGCAATGGTGTCATCGTTTGGAGGC  250

seq1  TAATTATGGGATGGATCCCTGGATATGGCAG  281
      |||||||||||||||||||||||||||||||
seq2  TAATTATGGGATGGATCCCTGGATATGGCAG  281


seq1: chr2_139185152_139186315
seq2: B6Ng01-319P18.g_69_1229

seq1  GAATTCTCCTCATGACACACTTTTCATGGACACAAAATAAGAAAGAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTCATGACACACTTTTCATGGACACAAAATAAGAAAGAATAT  50

seq1  AATTGAAGTATTGCTTTGCAGTTCTACAGCCACTCGCCTAAATCAAGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAAGTATTGCTTTGCAGTTCTACAGCCACTCGCCTAAATCAAGTGA  100

seq1  TTCAGCCCAGACAATCCCAGGTTACAACATGAACCTTAACGAGAGAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCCAGACAATCCCAGGTTACAACATGAACCTTAACGAGAGAGACA  150

seq1  AGACATAAGGTGTTGAACTGGGAAGTGATAGGTTCTGCCTCTGTTGGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATAAGGTGTTGAACTGGGAAGTGATAGGTTCTGCCTCTGTTGGGTT  200

seq1  TCCCTGTTTCCCTGGTCCTGGAATCTCAGAGTCCCTGTGAGCCTTCCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTTTCCCTGGTCCTGGAATCTCAGAGTCCCTGTGAGCCTTCCAAT  250

seq1  GAATCACATGCTCTCAAATTAGTGAATTTCTTCCTGTAACTAAGAGACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCACATGCTCTCAAATTAGTGAATTTCTTCCTGTAACTAAGAGACCA  300

seq1  GTAAGTAAGGAGTGATAGAAAAAGACATAATTTTTGAGAGCTGAAAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTAAGGAGTGATAGAAAAAGACATAATTTTTGAGAGCTGAAAGGAA  350

seq1  ACCATGCACCGAATGTAGAATGGCAAAAAATCAGACTTGACACCTGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGCACCGAATGTAGAATGGCAAAAAATCAGACTTGACACCTGAGAG  400

seq1  AAGTAGCTTATCATTGCCAGGGAGTAGGTTCAGATAGGAAGCTATAGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGCTTATCATTGCCAGGGAGTAGGTTCAGATAGGAAGCTATAGGGC  450

seq1  ATCCCTCCATTACACCCTTTCCCTGATGGAATAAACCCTGTTTCAGTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTCCATTACACCCTTTCCCTGATGGAATAAACCCTGTTTCAGTACA  500

seq1  AAGGTAACACCATGTGATATTTTTGTGAAAATTGACTCACATATGAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAACACCATGTGATATTTTTGTGAAAATTGACTCACATATGAATTT  550

seq1  GGAACTAGGGAGTATCACTTGAAGAAAGTCTGGGGCCCAGGAGACCTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTAGGGAGTATCACTTGAAGAAAGTCTGGGGCCCAGGAGACCTTCA  600

seq1  TTATCTGTAAATCAATACATGGAAACACAGGGTTAAGGTGTCTAGATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGTAAATCAATACATGGAAACACAGGGTTAAGGTGTCTAGATAAA  650

seq1  GTGTGCCCCAGTGGTTGGTGTATTAAAGGCTTGGTTGCCAGCTGATGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCCCAGTGGTTGGTGTATTAAAGGCTTGGTTGCCAGCTGATGAAG  700

seq1  CCTCAGGGAAGCAATCGAATGAGTAGGGTTCTGACTCTATCAGTGGTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGGAAGCAATCGAATGAGTAGGGTTCTGACTCTATCAGTGGTTCA  750

seq1  TAATTTGAAGTCACTGTTGAAACTACTAGAAACTAAGAGGTAGCACCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGAAGTCACTGTTGAAACTACTAGAAACTAAGAGGTAGCACCTCA  800

seq1  TTGGAGGATGAAAATTATTGAGTTCTGCACTTGAAAATTCTCTTTCCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGATGAAAATTATTGAGTTCTGCACTTGAAAATTCTCTTTCCTTC  850

seq1  CCTCCCTCCCTTCCTCCTCCCCTTCTCCCTTTCTCCCTCTCCCTCCCTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTCCCTTCCTCCTCCCCTTCTCCCTTTCTCCCTCTCCCTCCCTCT  900

seq1  TCCTCCCTCTCCCTCTCTCCTGTCCTCCTTCCTTCTTGGATTCTATGAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCTCTCCCTCTCTCCTGTCCTCCTTCCTTCTTGGATTCTATGAAG  950

seq1  TGAATAGTATTACCCAGCTATTTTCTGCTGTCCTGATGTTGTGTC-TCAC  999
      |||||||||||||||||||||||||||||||||||||| |||||| ||||
seq2  TGAATAGTATTACCCAGCTATTTTCTGCTGTCCTGATG-TGTGTCTTCAC  999

seq1  CATATCCCAGAAACAAGAGACTTTTCAGTAGAAAA--GAAATAGGCGCCC  1047
      ||||||||||||||||||||| |||||||||||||   ||||||||||||
seq2  CATATCCCAGAAACAAGAGAC-TTTCAGTAGAAAAAGAAAATAGGCGCCC  1048

seq1  TGAATCTATTG-TCTCCAA-TATTT-AATCACAACAAGAAAAAGTTAACT  1094
      |  |||||||| ||| ||| ||||| |||| ||||||| ||||| || ||
seq2  TTGATCTATTGTTCTTCAATTATTTAAATCCCAACAAGGAAAAG-TACCT  1097

seq1  AGCATAGATGGGAACCTCATTCTTTCTGTCCCTCATGATGAGCTAAGCTC  1144
      |||||||||||||  |||||||||   |||||||||||||  || |||||
seq2  AGCATAGATGGGA--CTCATTCTTCTGGTCCCTCATGATGGACT-AGCTC  1144

seq1  AGAATTTGTAGAGCTCGAGC  1164
       ||  |||||||||||||||
seq2  -GA--TTGTAGAGCTCGAGC  1161


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