BAC Information

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BAC

Clone NameB6Ng01-321C16
Chromosome16 (Build37)
Map Location 84,409,572 - 84,410,697
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039572, EG621729, LOC640489, LOC665664
Downstream geneLOC547311, LOC100039893, LOC100039634, Mrpl39, Jam2, Atp5j, LOC100039950, Gabpa, Gm311, App
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321C16.bB6Ng01-321C16.g
ACCGA110347GA110348
length1,1671,120
definitionB6Ng01-321C16.b B6Ng01-321C16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataacgaatggatgagaagcaccttaaaaatgt
tcaacatccttaatcatcagggaaatgtaaatcaaaacaaccctgagatt
ccacctcacaccagtcagaatggctaagatcaaaaattcatgtgacagca
gatgctggcgaggatgtggagaaagaggaacacttctccattgctagtgg
gattgcaagcttgtacaaccactctggaagtcactctggatgttcctcag
aaaattggacataatactaccggaagatccagcaatacctctcctgggca
tatacctagaagaagttccaactggtaataagaacacatgctcctatgtt
catagcagccttatttataatagccagaagctggaaagaacccagatgtc
cctcaacagaagaatggatacagaaaatttggtacatttacacaatggag
tactactcagctattaaaaacaatggatttatggaattcttggacaaatg
gatgtatctggagaatatcatccttagtgaggtaacccaatcacaaaaga
agtcattagatatgcacacactgataagtggatattagcccagaaactta
gaacacccaagatgcaatttgcaaaacacaagaaaatcaagaagagggaa
gaccaatgggtgggatacttcattcctccttagaatagggaacaaaatac
ccatggaaggagttacagagacaaagtttggagctaagacaaaaagatgg
accatccagagactaccccacctggggatccatcccataatcagccacca
aacccagacactattgcacatgccagaaagattttgctgaagggaccctg
ttatagctgtctcatatgaggttatgccagtgcctggcaaatacagaagt
ggatgctcacagtcatctataagatgaaacaatggagaagctagagaaag
cacccaaggagctgaaggatctgcaaccctatagtggaacagcattatga
actaacctgtacccccagagctcatgtctctagctgcatatgtagcagaa
gatggcctagtgacatcactagggaagagagttccttggtattgccaact
ttatatggcctcgtacagggaaccgccagggccagaaagcaaggattggt
gtgggtaaggggggatc
gaattcttattttatttataaaatcctcatttttcttttcctcttactgt
aaaaaaattcactgaattttttataatcaaaattacacagagaaaggaac
ttagcagggggctttcaggctatgttaaaaaatctttactaagttattat
tacagatatttaaggaaattaatccttttcatcacacaaaaatactcaga
ataagaaatagttatggaaatcttttctcagaagtgagaaactgattaga
aagaagatgaatatgaattgaaatatgaagcttttgcttttgaaaatctc
accaaatgctgagtatttaggaccttagatttaataactcttgaagtttg
ggcttcgaataaactagctcataatatgtgttaactttttgtcatgatgg
agcactctatgccttccaaaataattctttgctccattaaatctcaacta
tatagagtaatttctatttggacaatgttcatttctttctatgttgatac
ataatgctctaaaatataaatgccataatttatcctacccaaacatttaa
ctctaagctttatgcatttctggactacataatttcctagtataactaat
attatcaagattcatcccattaaattccaaaacaaaatctagttacttcc
aaagcagagatttccaaaatgattaataaccaggaaaatatgaaacgtga
gacagtcagtcttttatatcacagtgtacttgtgagagaagagaaactgc
atcctaatcacaggcaaaagggtaactactgataggtcggcttcctctgt
tcttctctttgaccacttctaacagatcactccagtcagaacctggcatt
tacagtttctcagtattctgagccttcacttttattcctgtatggttagg
gaaataactaagatcacaatatggcttaatatagctatgatacaacgtgt
tcttggtttcacaaggtaaagtgagaaatctgtgtacaaattgtctatct
tgtggacatgacatcatgcagaatattatgggattaaaccagggacatag
cgagaactctagaattatggtgaggaaaacctaaccagaactctttatac
gactagccttccaatgttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_84409572_84410697
seq2: B6Ng01-321C16.g_65_1184

seq1  GAATTCTTATTTTATTTATAAAATCCTCATTTTTCTTTTCCTCTTACTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTTTATTTATAAAATCCTCATTTTTCTTTTCCTCTTACTGT  50

seq1  AAAAAAATTCACTGAATTTTTTATAATCAAAATTACACAGAGAAAGGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATTCACTGAATTTTTTATAATCAAAATTACACAGAGAAAGGAAC  100

seq1  TTAGCAGGGGGCTTTCAGGCTATGTTAAAAAATCTTTACTAAGTTATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGGGGGCTTTCAGGCTATGTTAAAAAATCTTTACTAAGTTATTAT  150

seq1  TACAGATATTTAAGGAAATTAATCCTTTTCATCACACAAAAATACTCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATATTTAAGGAAATTAATCCTTTTCATCACACAAAAATACTCAGA  200

seq1  ATAAGAAATAGTTATGGAAATCTTTTCTCAGAAGTGAGAAACTGATTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAATAGTTATGGAAATCTTTTCTCAGAAGTGAGAAACTGATTAGA  250

seq1  AAGAAGATGAATATGAATTGAAATATGAAGCTTTTGCTTTTGAAAATCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGATGAATATGAATTGAAATATGAAGCTTTTGCTTTTGAAAATCTC  300

seq1  ACCAAATGCTGAGTATTTAGGACCTTAGATTTAATAACTCTTGAAGTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAATGCTGAGTATTTAGGACCTTAGATTTAATAACTCTTGAAGTTTG  350

seq1  GGCTTCGAATAAACTAGCTCATAATATGTGTTAACTTTTTGTCATGATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCGAATAAACTAGCTCATAATATGTGTTAACTTTTTGTCATGATGG  400

seq1  AGCACTCTATGCCTTCCAAAATAATTCTTTGCTCCATTAAATCTCAACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCTATGCCTTCCAAAATAATTCTTTGCTCCATTAAATCTCAACTA  450

seq1  TATAGAGTAATTTCTATTTGGACAATGTTCATTTCTTTCTATGTTGATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAGTAATTTCTATTTGGACAATGTTCATTTCTTTCTATGTTGATAC  500

seq1  ATAATGCTCTAAAATATAAATGCCATAATTTATCCTACCCAAACATTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGCTCTAAAATATAAATGCCATAATTTATCCTACCCAAACATTTAA  550

seq1  CTCTAAGCTTTATGCATTTCTGGACTACATAATTTCCTAGTATAACTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAGCTTTATGCATTTCTGGACTACATAATTTCCTAGTATAACTAAT  600

seq1  ATTATCAAGATTCATCCCATTAAATTCCAAAACAAAATCTAGTTACTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCAAGATTCATCCCATTAAATTCCAAAACAAAATCTAGTTACTTCC  650

seq1  AAAGCAGAGATTTCCAAAATGATTAATAACCAGGAAAATATGAAACGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGAGATTTCCAAAATGATTAATAACCAGGAAAATATGAAACGTGA  700

seq1  GACAGTCAGTCTTTTATATCACAGTGTACTTGTGAGAGAAGAGAAACTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTCAGTCTTTTATATCACAGTGTACTTGTGAGAGAAGAGAAACTGC  750

seq1  ATCCTAATCACAGGCAAAAGGGTAACTACTGATAGGTCGGCTTCCTCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAATCACAGGCAAAAGGGTAACTACTGATAGGTCGGCTTCCTCTGT  800

seq1  TCTTCTCTTTGACCACTTCTAACAGATCACTCCAGTCAGAACCTGGCATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTTTGACCACTTCTAACAGATCACTCCAGTCAGAACCTGGCATT  850

seq1  TACAGTTTCTCAGTATTCTGAGCCTTCACTTTTATTCCTGTATGGTTAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTTCTCAGTATTCTGAGCCTTCACTTTTATTCCTGTATGGTTAGG  900

seq1  GAAATAACTAAGATCACAATATGGCTTAATATAGCTATGATACAAACGTG  950
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAAATAACTAAGATCACAATATGGCTTAATATAGCTATGATAC-AACGTG  949

seq1  TTCTTGGTTTCACAAGGTAAAAGTGAGAAATCTGTGTACAAATTGTCTAT  1000
      |||||||||||||||||| |||||||||||||||||||||||||||||| 
seq2  TTCTTGGTTTCACAAGGT-AAAGTGAGAAATCTGTGTACAAATTGTCTA-  997

seq1  TCTTGTGGACATGACAATCAATGCAGATAATTATGGGATTAAACCAGGAA  1050
      ||||||||||||||| ||| |||||||  ||||||||||||||||||| |
seq2  TCTTGTGGACATGAC-ATC-ATGCAGAATATTATGGGATTAAACCAGGGA  1045

seq1  CATAGCGAGAACTCTAAGAATTAATGTGAGGAAAACCTAACCAG-ACTCT  1099
      ||||||||||||||| |||||||  ||||||||||||||||||| |||||
seq2  CATAGCGAGAACTCT-AGAATTATGGTGAGGAAAACCTAACCAGAACTCT  1094

seq1  TTATAACGACATAG-CTTCCAATGTTCA  1126
      |||| ||||| ||| |||||||||||||
seq2  TTAT-ACGAC-TAGCCTTCCAATGTTCA  1120