BAC Information

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BAC

Clone NameB6Ng01-321H19
Chromosome16 (Build37)
Map Location 61,199,974 - 61,200,724
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha6, LOC100043804, EG668168, LOC668170
Downstream geneLOC100043524, LOC668183
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321H19.bB6Ng01-321H19.g
ACCGA110579GA110580
length7511,190
definitionB6Ng01-321H19.b B6Ng01-321H19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgataaatcactttttaaaaactctatatttaatcacattct
ttctctctctctctctctctctctctctctctctctctctctctctctct
cccactttgccttcatcttcactctttctgtccactgcccaaattttcat
tcctaagtttttgtactaataaacatctatgattattagcagttcagaat
tctcaacatgatctattaactgaagaaaaaatgctaaatttgaatcatga
ataataaggataagattattcttcataatttcttgattttataactcatt
ttaaagtaaaattttatacaaactaattgtgaatataatttatataagtg
ttcagaacccccatccctaacttagaagttatcgccacttgataacttct
tagaaatgatcccatgcccagaagtaaatagccagcaaaatatgaactca
gtggtgttttgggatgtttaaacaaagtcaattattatatttgttgaaat
ttttttcttatgatactttgcctgaaaattgtattatagttttgaggttt
ttgttttgttttgtttgcttatatactatagtttctgatcgtgtgttcat
atgggatttctgagaatatgtctatgtgtgaatatatgtgtggatttagt
gcctttactatgtcatattttatgtttgattgcttgcttatttgtcctat
tctcgcctgttatgataataagataatttatatatttagtattaattata
t
gaattctacgcgtctcaacccttccctgacgaagggcttctccactggat
ttcctctgcattttcctactttaaggagtgtgtgggggtaggcttgtttg
ccgtgatcctatgcagtggagcgttgcttttgctctggatggcctgtaaa
cttaaagcccaaacaaaaagggacaggatggtaatagcccaagcacttgc
agcattagaacatggtgccacccctgatatatggttatctatacttaagc
aattggtcgctggccactcagctcttgcaccccacgaggctagtctcatt
gcacgggatagagtgagtgtgcttcagcagcccaagagagttgcacggct
aagcactgcagtagaaaggctctgcggcataaaatgagcctattctaggg
agacatgtcatctcgtatgaaggttgagtgtccaagtgtccttcccccag
gaaaaacaacatgggagcggaccaagacccctccgggtgatgagcctagg
agaaggttttgtgtaatgcctctatttttgctcactggggatttgacctc
tatctccactgtcagtactgggtggcctgttgtcttttaaataaaaggaa
agggagagatgtaaggagccgcccttgcaatcatatccggtgttctaact
gataaacaattagtctgcgtatgtgctggggtatttctccattccttgtg
ccctgcctgtcccgtggcacatcatctgggctgatagtgagcagccagtc
agggtgagtcacgtctccaaccgctctttgtgggttataaaaggactgag
tttcctgtattcgaggtcttccttagatgtaagcaataaagctttgccgt
agaaggatctggctgtccgagtgtgttttgctggcgaacattacaaggac
aagaatgcacctataattagcattgcaaataatcattaaaattcaatttc
ttctgatattcaaataaagacagcataatgctatgatgcacatccagata
tttcaaatattgcttatacttttagtcttacttaagtgttatgataaaca
ttcatattatgtccctttgatttttcctatgatttgtgtggacactaatt
tgaaaagagatttttaagtgaaatatttagctagttaaggtaagacaaac
accaggttatgtatgggacacacacattatccctttgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_61199974_61200724
seq2: B6Ng01-321H19.b_45_795

seq1  GAATTCCATGATAAATCACTTTTTAAAAACTCTATATTTAATCACATTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGATAAATCACTTTTTAAAAACTCTATATTTAATCACATTCT  50

seq1  TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  100

seq1  CCCACTTTGCCTTCATCTTCACTCTTTCTGTCCACTGCCCAAATTTTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTTGCCTTCATCTTCACTCTTTCTGTCCACTGCCCAAATTTTCAT  150

seq1  TCCTAAGTTTTTGTACTAATAAACATCTATGATTATTAGCAGTTCAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGTTTTTGTACTAATAAACATCTATGATTATTAGCAGTTCAGAAT  200

seq1  TCTCAACATGATCTATTAACTGAAGAAAAAATGCTAAATTTGAATCATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAACATGATCTATTAACTGAAGAAAAAATGCTAAATTTGAATCATGA  250

seq1  ATAATAAGGATAAGATTATTCTTCATAATTTCTTGATTTTATAACTCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAGGATAAGATTATTCTTCATAATTTCTTGATTTTATAACTCATT  300

seq1  TTAAAGTAAAATTTTATACAAACTAATTGTGAATATAATTTATATAAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTAAAATTTTATACAAACTAATTGTGAATATAATTTATATAAGTG  350

seq1  TTCAGAACCCCCATCCCTAACTTAGAAGTTATCGCCACTTGATAACTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAACCCCCATCCCTAACTTAGAAGTTATCGCCACTTGATAACTTCT  400

seq1  TAGAAATGATCCCATGCCCAGAAGTAAATAGCCAGCAAAATATGAACTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATGATCCCATGCCCAGAAGTAAATAGCCAGCAAAATATGAACTCA  450

seq1  GTGGTGTTTTGGGATGTTTAAACAAAGTCAATTATTATATTTGTTGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGTTTTGGGATGTTTAAACAAAGTCAATTATTATATTTGTTGAAAT  500

seq1  TTTTTTCTTATGATACTTTGCCTGAAAATTGTATTATAGTTTTGAGGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTATGATACTTTGCCTGAAAATTGTATTATAGTTTTGAGGTTT  550

seq1  TTGTTTTGTTTTGTTTGCTTATATACTATAGTTTCTGATCTTGTGTTCTT  600
      |||||||||||||||||||||||||||||||||||||||| ||||||| |
seq2  TTGTTTTGTTTTGTTTGCTTATATACTATAGTTTCTGATCGTGTGTTCAT  600

seq1  ATGGGATTTCTGAGAATATGTCTATTTGTGAATAAATGTGTGGATTTTGT  650
      ||||||||||||||||||||||||| |||||||| |||||||||||| ||
seq2  ATGGGATTTCTGAGAATATGTCTATGTGTGAATATATGTGTGGATTTAGT  650

seq1  GCCTTTTCTTTGTCATATTTTATGTTTGATTGTTTGCTTATTTGTCCTAT  700
      |||||| || |||||||||||||||||||||| |||||||||||||||||
seq2  GCCTTTACTATGTCATATTTTATGTTTGATTGCTTGCTTATTTGTCCTAT  700

seq1  TCTGGCCTGTTATGATAATAAGATAATTATTATATTTAGTATTAATTATA  750
      ||| ||||||||||||||||||||||||  ||||||||||||||||||||
seq2  TCTCGCCTGTTATGATAATAAGATAATTTATATATTTAGTATTAATTATA  750

seq1  T  751
      |
seq2  T  751