BAC Information

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BAC

Clone NameB6Ng01-322C20
Chromosome16 (Build37)
Map Location 54,673,454 - 54,791,969
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC433027, LOC100043442
Downstream geneLOC100043449, LOC667927, LOC436421, Zpld1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322C20.bB6Ng01-322C20.g
ACCGA111086GA111087
length1,1521,145
definitionB6Ng01-322C20.b B6Ng01-322C20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(54,790,801 - 54,791,969)(54,673,454 - 54,674,600)
sequence
gaattcttttttggctttctatgtcatacaaaattttttttctactaaga
cagtttattttacactaatctaggttggcctatctgctcatcttggattc
ttatggattttaaagtttatgtggattagccaactcttattctgctgggt
tttcctttatatacggttttcctctagctgctttcagtatcctttttttt
tccctgtatatttaatgttttccctaaaataggttatagggactttgttt
tctggttatgtctggtcttctatgtgtatcttctatctatatgtatgttt
caggttgatttctttatacaatccagaactgcatgcttaggcatggtgcc
tcccagagtgggctctgagtttctccattaattaaacaaaaaaatgctcc
acaggtatgaccatagggcaatctgatatgtctactgggttctttgtctc
ccactggcgtgccaccatcacaggtaggaggcagaacaaagtccagaatg
gagagtctacagtggttctgggtcaccactggtgtgctttctggagaggg
agtcaggaacagcttaggaggcagagttcaggaccaacagagtacagcat
ggttaggaacaagtgctgagagtaccagaggggttggaggagagagaacc
tttcttctgagctgtagacactggcttgcagacttgatgtgtgtgccagg
gtcaggggacccagggagtggggagggtaattccttaatttcttccagta
ttgtttttgttctttccaatgttttacttaaaattctttttgttacccat
tttcagtacttagggagttatacttacttaagtcatggatatcaccactg
atatcccctttatggcttcagaatttaatttgtgacagatcttgaaaaat
atcagatatattattttattgatattctttattcttttccattttattag
atattttctttatttacatttcaaatgctatcccgaaagttcgtattagc
cccctttccccgcctgctcccctattcatgcactcccacttctggcctgt
gtccctgtactggggcatataaaattgtagaacagggcctcttctccaat
gatgtcactagcattcttctactacaattgcagcttagaacatgagtctc
tg

gaattcagaactagttttgcatttgtggttgttgctctacagagaatgga
tatggtcatgtttacagctattaagtgataagatttggtgctgccaattg
aaatgaaacaaattccaagatatgtatgttctttcatatgtaaacagatt
tctagaaagaagcaattccagtgctcaggtttcaggatacctggtggttc
ccaggaaagatgctatccaactaaccattaccttactttataaagatttt
acaatctcagataaatgcataccagtactatgcctagaaataaaattttc
atgtgtgataagtctatatagtttatttatatttccaagaacaactgctt
ggctttttgggtggttcatatctacataacaactcctgtttagtaaggtt
gtaaaatgttttcttaaaccttttatcccttgctgatgtgactgggaata
aatgaatggaatcctttcttacaggcttattttatctctaaagaaagtag
ttcagctcccctgccttttgggtcagcactaaatcataaagaaaagccgt
ctgttttgtcttgatggagacactgagaaggattgttattctactcagcc
ttaaggtcattgctattcggatacactgttgtcctgactgatgaaggtcc
agtggcttatggtgaaattaataacagggtggtatttgggttaagtacta
ctggaaaataaagatgaataatattgttgatggtcctgagggcttgaaaa
aaagtcactgtcttcatttatttagttttgcagtgataagatgtaaatgt
tgcaaaggttggtatcaggtaaagggaaagctttcagagagaaaggcatt
caagtatgcatttgagccttctctgttctttggtgctcagatgcttcaga
ggaaatttgtataattatttaaaacgatctatctgaaccttagtagcctt
tacttcaactattttcttagggctgtagatatctttccaaaagattgtca
catgtactttcagataaaaaaaatctagacattcttcaaatataaacaca
cctcaaaaaaataaaatcaacaaaacaaacaagttatatatatacagtta
agtcacagctggcatatggactagcagaatcttcagactcagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_54790801_54791969
seq2: B6Ng01-322C20.b_44_1195 (reverse)

seq1  CAGAG-CTCATGTCTCT-AGCTGCATATGTAGTAGAAGATGGCCTAGTTG  48
      ||||| ||||||| ||| |||||||  ||||||||||||  | |||||  
seq2  CAGAGACTCATGT-TCTAAGCTGCAATTGTAGTAGAAGAATG-CTAGT--  46

seq1  GCCATCATTGGGAGAGAGGCCCCTTGGTCTTACAAATTTTATATGCCCCA  98
      | |||||||||   ||||||||  || || ||| ||||||||||||||||
seq2  GACATCATTGGAGAAGAGGCCC--TGTTC-TAC-AATTTTATATGCCCCA  92

seq1  GTACAGGGGAACACCAGGGCCAAGAAGTGGGAGTGCATGAATAGGGGAGC  148
      ||||||||  |||    |||| ||||||||||||||||||||||||||||
seq2  GTACAGGGACACA----GGCC-AGAAGTGGGAGTGCATGAATAGGGGAGC  137

seq1  AGGGCGGGGGAAAGGGGGCTAATACGGAACTTTCGGGATAGCATTTGAAA  198
      |||   ||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGG--CGGGGAAAGGGGGCTAATAC-GAACTTTCGGGATAGCATTTGAAA  184

seq1  TGTAAATAAAGAAAATATCTAATAAAAATGGAAAAGAAATAAAAGAATAT  248
      ||||||||||||||||||||||| ||||||||||||||   |||||||||
seq2  TGTAAATAAAGAAAATATCTAAT-AAAATGGAAAAGAA--TAAAGAATAT  231

seq1  CAATAAAATAATATATCTGATATTTTTCAAGATCTGTCACAAATTAAATT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAATAATATATCTGATATTTTTCAAGATCTGTCACAAATTAAATT  281

seq1  CTGAAGCCATAAAGGGGATATCAGTGGTGATATCCATGACTTAAGTAAGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCCATAAAGGGGATATCAGTGGTGATATCCATGACTTAAGTAAGT  331

seq1  ATAACTCCCTAAGTACTGAAAATGGGTAACAAAAAGAATTTTAAGTAAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTCCCTAAGTACTGAAAATGGGTAACAAAAAGAATTTTAAGTAAAA  381

seq1  CATTGGAAAGAACAAAAACAATACTGGAAGAAATTAAGGAATTACCCTCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGAAAGAACAAAAACAATACTGGAAGAAATTAAGGAATTACCCTCC  431

seq1  CCACTCCCTGGGTCCCCTGACCCTGGCACACACATCAAGTCTGCAAGCCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCCTGGGTCCCCTGACCCTGGCACACACATCAAGTCTGCAAGCCA  481

seq1  GTGTCTACAGCTCAGAAGAAAGGTTCTCTCTCCTCCAACCCCTCTGGTAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTACAGCTCAGAAGAAAGGTTCTCTCTCCTCCAACCCCTCTGGTAC  531

seq1  TCTCAGCACTTGTTCCTAACCATGCTGTACTCTGTTGGTCCTGAACTCTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCACTTGTTCCTAACCATGCTGTACTCTGTTGGTCCTGAACTCTG  581

seq1  CCTCCTAAGCTGTTCCTGACTCCCTCTCCAGAAAGCACACCAGTGGTGAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTAAGCTGTTCCTGACTCCCTCTCCAGAAAGCACACCAGTGGTGAC  631

seq1  CCAGAACCACTGTAGACTCTCCATTCTGGACTTTGTTCTGCCTCCTACCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACCACTGTAGACTCTCCATTCTGGACTTTGTTCTGCCTCCTACCT  681

seq1  GTGATGGTGGCACGCCAGTGGGAGACAAAGAACCCAGTAGACATATCAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGTGGCACGCCAGTGGGAGACAAAGAACCCAGTAGACATATCAGA  731

seq1  TTGCCCTATGGTCATACCTGTGGAGCATTTTTTTGTTTAATTAATGGAGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCTATGGTCATACCTGTGGAGCATTTTTTTGTTTAATTAATGGAGA  781

seq1  AACTCAGAGCCCACTCTGGGAGGCACCATGCCTAAGCATGCAGTTCTGGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGAGCCCACTCTGGGAGGCACCATGCCTAAGCATGCAGTTCTGGA  831

seq1  TTGTATAAAGAAATCAACCTGAAACATACATATAGATAGAAGATACACAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATAAAGAAATCAACCTGAAACATACATATAGATAGAAGATACACAT  881

seq1  AGAAGACCAGACATAACCAGAAAACAAAGTCCCTATAACCTATTTTAGGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACCAGACATAACCAGAAAACAAAGTCCCTATAACCTATTTTAGGG  931

seq1  AAAACATTAAATATACAGGGAAAAAAAAAGGATACTGAAAGCAGCTAGAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATTAAATATACAGGGAAAAAAAAAGGATACTGAAAGCAGCTAGAG  981

seq1  GAAAACCGTATATAAAGGAAAACCCAGCAGAATAAGAGTTGGCTAATCCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCGTATATAAAGGAAAACCCAGCAGAATAAGAGTTGGCTAATCCA  1031

seq1  CATAAACTTTAAAATCCATAAGAATCCAAGATGAGCAGATAGGCCAACCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAACTTTAAAATCCATAAGAATCCAAGATGAGCAGATAGGCCAACCT  1081

seq1  AGATTAGTGTAAAATAAACTGTCTTAGTAGAAAAAAAATTTTGTATGACA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAGTGTAAAATAAACTGTCTTAGTAGAAAAAAAATTTTGTATGACA  1131

seq1  TAGAAAGCCAAAAAAGAATTC  1169
      |||||||||||||||||||||
seq2  TAGAAAGCCAAAAAAGAATTC  1152


seq1: chr16_54673454_54674600
seq2: B6Ng01-322C20.g_65_1209

seq1  GAATTCAGAACTAGTTTTGCATTTGTGGTTGTTGCTCTACAGAGAATGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAACTAGTTTTGCATTTGTGGTTGTTGCTCTACAGAGAATGGA  50

seq1  TATGGTCATGTTTACAGCTATTAAGTGATAAGATTTGGTGCTGCCAATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTCATGTTTACAGCTATTAAGTGATAAGATTTGGTGCTGCCAATTG  100

seq1  AAATGAAACAAATTCCAAGATATGTATGTTCTTTCATATGTAAACAGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAACAAATTCCAAGATATGTATGTTCTTTCATATGTAAACAGATT  150

seq1  TCTAGAAAGAAGCAATTCCAGTGCTCAGGTTTCAGGATACCTGGTGGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAAAGAAGCAATTCCAGTGCTCAGGTTTCAGGATACCTGGTGGTTC  200

seq1  CCAGGAAAGATGCTATCCAACTAACCATTACCTTACTTTATAAAGATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAAGATGCTATCCAACTAACCATTACCTTACTTTATAAAGATTTT  250

seq1  ACAATCTCAGATAAATGCATACCAGTACTATGCCTAGAAATAAAATTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTCAGATAAATGCATACCAGTACTATGCCTAGAAATAAAATTTTC  300

seq1  ATGTGTGATAAGTCTATATAGTTTATTTATATTTCCAAGAACAACTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGATAAGTCTATATAGTTTATTTATATTTCCAAGAACAACTGCTT  350

seq1  GGCTTTTTGGGTGGTTCATATCTACATAACAACTCCTGTTTAGTAAGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTTGGGTGGTTCATATCTACATAACAACTCCTGTTTAGTAAGGTT  400

seq1  GTAAAATGTTTTCTTAAACCTTTTATCCCTTGCTGATGTGACTGGGAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATGTTTTCTTAAACCTTTTATCCCTTGCTGATGTGACTGGGAATA  450

seq1  AATGAATGGAATCCTTTCTTACAGGCTTATTTTATCTCTAAAGAAAGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATGGAATCCTTTCTTACAGGCTTATTTTATCTCTAAAGAAAGTAG  500

seq1  TTCAGCTCCCCTGCCTTTTGGGTCAGCACTAAATCATAAAGAAAAGCCGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTCCCCTGCCTTTTGGGTCAGCACTAAATCATAAAGAAAAGCCGT  550

seq1  CTGTTTTGTCTTGATGGAGACACTGAGAAGGATTGTTATTCTACTCAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTGTCTTGATGGAGACACTGAGAAGGATTGTTATTCTACTCAGCC  600

seq1  TTAAGGTCATTGCTATTCGGATACACTGTTGTCCTGACTGATGAAGGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGTCATTGCTATTCGGATACACTGTTGTCCTGACTGATGAAGGTCC  650

seq1  AGTGGCTTATGGTGAAATTAATAACAGGGTGGTATTTGGGTTAAGTACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTTATGGTGAAATTAATAACAGGGTGGTATTTGGGTTAAGTACTA  700

seq1  CTGGAAAATAAAGATGAATAATATTGTTGATGGTCCTGAGGGCTTGAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAATAAAGATGAATAATATTGTTGATGGTCCTGAGGGCTTGAAAA  750

seq1  AAAGTCACTGTCTTCATTTATTTAGTTTTGCAGTGATAAGATGTAAATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCACTGTCTTCATTTATTTAGTTTTGCAGTGATAAGATGTAAATGT  800

seq1  TGCAAAGGTTGGTATCAGGT-AAGGGAAAGCTTTCAGAGAG-AAGGCATT  848
      |||||||||||||||||||| |||||||||||||||||||| ||||||||
seq2  TGCAAAGGTTGGTATCAGGTAAAGGGAAAGCTTTCAGAGAGAAAGGCATT  850

seq1  CAAGTATGCATTTGAGCCTTCTCTGTTCTTTGGTGCTCAGATGCTTCAGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTATGCATTTGAGCCTTCTCTGTTCTTTGGTGCTCAGATGCTTCAGA  900

seq1  GGAAATTTGTATAATTATTTAAAACGATCTATCTGAACCTTAGTAGCCTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTTGTATAATTATTTAAAACGATCTATCTGAACCTTAGTAGCCTT  950

seq1  TACTTCAACTATTTTTCTTAGGGCTGTAGAATATCTTTCCAAAAGATTGT  998
      ||||||||||| ||||||||||||||||| ||||||||||||||||||||
seq2  TACTTCAACTA-TTTTCTTAGGGCTGTAG-ATATCTTTCCAAAAGATTGT  998

seq1  CACATGTACTTTCAGGATAAAAAAAATCTAGGACATTCTTCAAATAT-AA  1047
      |||||||||||||| ||||||||||||||| |||||||||||||||| ||
seq2  CACATGTACTTTCA-GATAAAAAAAATCTA-GACATTCTTCAAATATAAA  1046

seq1  CACACCTC-AAAAAATAAAATCAAACATACAAACAAGTTATATATAACCA  1096
      |||||||| |||||||||||||||  | ||||||||||||||||||  ||
seq2  CACACCTCAAAAAAATAAAATCAACAAAACAAACAAGTTATATATATACA  1096

seq1  GGTAAGTCACAGCTTGCATAT-GACTAGCAGGATCTTCCAGGACTCAAGA  1145
      | |||||||||||| |||||| ||||||||| ||||||   ||||| |||
seq2  GTTAAGTCACAGCTGGCATATGGACTAGCAGAATCTTC--AGACTC-AGA  1143

seq1  AA  1147
      ||
seq2  AA  1145


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