BAC Information

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BAC

Clone NameB6Ng01-323F19
Chromosome16 (Build37)
Map Location 9,018,144 - 9,019,284
singlet/doubletsinglet
Overlap genenone
Upstream gene4930511J11Rik, BC024814, Abat, LOC665207, Tmem186, Pmm2, Carhsp1, EG436336, Usp7, LOC665231, 1810013L24Rik, LOC100043106
Downstream geneGrin2a, LOC665291
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323F19.bB6Ng01-323F19.g
ACCGA111959GA111960
length1,112774
definitionB6Ng01-323F19.b B6Ng01-323F19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcctccggcagctgaggttggtaagaggagacactcaaggggg
caagacaatgctaaccttgctttgggggaaagaaagggttgttctaatgg
tggacaggaaggttaggaaaggctgggaaggttggcaaactgatctggag
gttaggggtaattttttaaaaggaatctagaatctgaactctctgagata
cacgggaccttaaatggctctattcatctgcaagaattcctgttctttct
tgtaatgagtaagaaaatagatggttgcaacttagcagacgcctcggctc
ttcctccctcttccccccaatctacatgagcagctaacatgaaatcctcc
atgtcttgacccctccccagcctgccatctgacaggccccaatggtggac
tttcatcaagagctttaacaattgccaactcgtggaccaagagacccaag
tccccgagcacatgaaatccccacaaagcacgtttctagccaagtttaga
agttctcagctctacaatgtgatcacccgggacgagagtaatgaggggag
aggcctttataaaacccctatgcctgggcaccaccgagagcaacagtctc
atatcttaatgtggcaaaaacctcaagcacaaccaggagataaaagaatg
aaggaatattcattgctggcaactaataaggagaccgatgataatatttt
tcaaaacagcattctctagaataaagaaagcatggtatttcttttttatt
cagggcctacatccatatagaaaagcacatatgaaaggagccacatttct
gaacacactcagtttaaactgcacttttcacatgttcagaagacgatcaa
cagagtctgacagtagtggatctacaatttcatccctgacagagtgcatg
ttcaaggtcaacctgcactatacagtagaccctgtttctagaagaataaa
aaaaaaaaaaaaggaggacccaaactgcttctgggagcactccgtttgta
ttatgagagcgtgatcggacatctagagagcactgggacgagttgatgcc
tgagtttatctaagagtttagtgcaataacagagcaatgagaagctggcc
agcttttacaag

gaattctcttgttagctctgtacttcatttttaattgggttatttggctt
tttggaagttaacttcttgagttctttgtatattttggatattagccctc
tgtcatgttgtagggttagtaagatcctttcccaatctgtaggttgctgt
cttgtccttttgactatgtcctttgccttactgaagcttttctgtttcat
gaggtccccttgttgatcttagcgcctgaacccttggtattctgtaaaat
ttcccctgtgccaatgcattcaagactctcccgctttctcttctgaggtt
cagtgtctctggctttatggtgaggtccatgatattcttggacttgagct
ttgtgcatggtgataaatatgggtcaattcgaattcttctacatgcaggc
tgccagttagaccagcaccatacatatgtaggtttatttctggctcttca
attctattccattgatctacctgtctatctctgtaacaatagtatgtggt
gttttgttttgttttgttttgttttttatcactattgctctgtacagctt
gaggccagggatagtgatttcccccagaagttcttttattgttgagaatt
gttttcactatcctgggttttttgttttttccataggaagttgagaattt
gtttttccatgtctgtggaatgcccatgatacaactcacagactataaga
actttacaagaaaaaaggcccaagagaggatgcttcaatcttatgtagag
gggggaacaaaataatcatgggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_9018144_9019284
seq2: B6Ng01-323F19.b_46_1157 (reverse)

seq1  CTTGTAAAAAGCTGCGCAAGCCCTTCCTCATTGTGCCTTCTTGTTATTGC  50
      ||||| |||||||| || |||   | |||||||  |     |||||||||
seq2  CTTGT-AAAAGCTG-GCCAGC---TTCTCATTGCTC-----TGTTATTGC  40

seq1  AACTAAAACTCTTTAGATAAACTCAGGGGCCATCAAACTTCGTCCCAAGG  100
       ||| |||||| |||||||||||||||   ||||||   ||||||||  |
seq2  -ACT-AAACTC-TTAGATAAACTCAGG---CATCAA--CTCGTCCCA--G  80

seq1  TGCTCTTCTAGGTGTCCCGATCACCGCTTCTCATAATACCAAACGGAGTG  150
      ||||| ||||| ||| ||||||| ||| |||||||||| |||||||||||
seq2  TGCTC-TCTAGATGT-CCGATCA-CGC-TCTCATAATA-CAAACGGAGTG  125

seq1  CTCCCAGAAGCAGTTTGGGTCCTCCTTTTTTTTTTTTTTTTTATTCTTCC  200
      |||||||||||||||||||||||||  |||||||||||||||||||||| 
seq2  CTCCCAGAAGCAGTTTGGGTCCTCC--TTTTTTTTTTTTTTTATTCTTC-  172

seq1  TTAGAAACAGGGTCTACTGTATAGTGCAGGTTGACCTTGAACATGCACTC  250
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TAGAAACAGGGTCTACTGTATAGTGCAGGTTGACCTTGAACATGCACTC  221

seq1  TGTCAGGGATGAAATTGTAGATCCACTACTGTCAGACTCTGTTGATCGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGGGATGAAATTGTAGATCCACTACTGTCAGACTCTGTTGATCGTC  271

seq1  TTCTGAACATGTGAAAAGTGCAGTTTAAACTGAGTGTGTTCAGAAATGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAACATGTGAAAAGTGCAGTTTAAACTGAGTGTGTTCAGAAATGTG  321

seq1  GCTCCTTTCATATGTGCTTTTCTATATGGATGTAGGCCCTGAATAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTTCATATGTGCTTTTCTATATGGATGTAGGCCCTGAATAAAAAA  371

seq1  GAAATACCATGCTTTCTTTATTCTAGAGAATGCTGTTTTGAAAAATATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATACCATGCTTTCTTTATTCTAGAGAATGCTGTTTTGAAAAATATTA  421

seq1  TCATCGGTCTCCTTATTAGTTGCCAGCAATGAATATTCCTTCATTCTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCGGTCTCCTTATTAGTTGCCAGCAATGAATATTCCTTCATTCTTTT  471

seq1  ATCTCCTGGTTGTGCTTGAGGTTTTTGCCACATTAAGATATGAGACTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTGGTTGTGCTTGAGGTTTTTGCCACATTAAGATATGAGACTGTT  521

seq1  GCTCTCGGTGGTGCCCAGGCATAGGGGTTTTATAAAGGCCTCTCCCCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCGGTGGTGCCCAGGCATAGGGGTTTTATAAAGGCCTCTCCCCTCA  571

seq1  TTACTCTCGTCCCGGGTGATCACATTGTAGAGCTGAGAACTTCTAAACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTCGTCCCGGGTGATCACATTGTAGAGCTGAGAACTTCTAAACTT  621

seq1  GGCTAGAAACGTGCTTTGTGGGGATTTCATGTGCTCGGGGACTTGGGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGAAACGTGCTTTGTGGGGATTTCATGTGCTCGGGGACTTGGGTCT  671

seq1  CTTGGTCCACGAGTTGGCAATTGTTAAAGCTCTTGATGAAAGTCCACCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTCCACGAGTTGGCAATTGTTAAAGCTCTTGATGAAAGTCCACCAT  721

seq1  TGGGGCCTGTCAGATGGCAGGCTGGGGAGGGGTCAAGACATGGAGGATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCCTGTCAGATGGCAGGCTGGGGAGGGGTCAAGACATGGAGGATTT  771

seq1  CATGTTAGCTGCTCATGTAGATTGGGGGGAAGAGGGAGGAAGAGCCGAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTAGCTGCTCATGTAGATTGGGGGGAAGAGGGAGGAAGAGCCGAGG  821

seq1  CGTCTGCTAAGTTGCAACCATCTATTTTCTTACTCATTACAAGAAAGAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTGCTAAGTTGCAACCATCTATTTTCTTACTCATTACAAGAAAGAAC  871

seq1  AGGAATTCTTGCAGATGAATAGAGCCATTTAAGGTCCCGTGTATCTCAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTCTTGCAGATGAATAGAGCCATTTAAGGTCCCGTGTATCTCAGA  921

seq1  GAGTTCAGATTCTAGATTCCTTTTAAAAAATTACCCCTAACCTCCAGATC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCAGATTCTAGATTCCTTTTAAAAAATTACCCCTAACCTCCAGATC  971

seq1  AGTTTGCCAACCTTCCCAGCCTTTCCTAACCTTCCTGTCCACCATTAGAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGCCAACCTTCCCAGCCTTTCCTAACCTTCCTGTCCACCATTAGAA  1021

seq1  CAACCCTTTCTTTCCCCCAAAGCAAGGTTAGCATTGTCTTGCCCCCTTGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCTTTCTTTCCCCCAAAGCAAGGTTAGCATTGTCTTGCCCCCTTGA  1071

seq1  GTGTCTCCTCTTACCAACCTCAGCTGCCGGAGGAGGAATTC  1141
      |||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCCTCTTACCAACCTCAGCTGCCGGAGGAGGAATTC  1112


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