BAC Information

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BAC

Clone NameB6Ng01-323F22
Chromosome16 (Build37)
Map Location 27,991,016 - 28,105,982
singlet/doubletdoublet
Overlap genenone
Upstream geneOstn, Uts2d, Ccdc50
Downstream geneFgf12, 1600021P15Rik, EG666717
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323F22.bB6Ng01-323F22.g
ACCGA111965GA111966
length1,027430
definitionB6Ng01-323F22.b B6Ng01-323F22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,104,957 - 28,105,982)(27,991,016 - 27,991,450)
sequence
gaattctcataagcctgggggaaatcattcaggtagagtctaagggagaa
caaaagaagaaagaaaatgcccatagtgcagaccatggagcaggaatgga
ggatggagggaacaggggatatactatttggcctaatataaggaggaaaa
gaaatataaaaggcagggaacaaaggaaagaggcaaaatagacatatgtc
cttgggatacaaaaaaaaaaattcagaactcaaaattttaaactaaacag
cgtcaatgactggtggagaggaagtgtcgagttctccaacagccttggag
ggctcaggaggctgtgaccccaggagaactggattgcagagctctctgtc
ctcccaatccattctgtgcccccacttccaccacctcccagcgggtattc
gagctgctcctagtgcctttgctggttcgcagcctggagaatcccaggtg
ccttgtcagagctgcctcagaactacacccgtttgcttctacatcgctgt
ggactccccccgtgcgtgtatgagtgtgcgttctggtagatgccacagct
ggaagaggtgctagaagacagagattcttcactgaacaactgctgatcag
aggctggaatcagagctgcacagtggtgcttagcaatcagtctcagcatg
gtcttccttcaccttaagacctccaggtagtgtgcatgatgttttgatgt
catcattgtcacttagtaagcaactgttggcttttctctccgtttatgac
tttcctgcagtggcaccattattttccttaccctgtcagttggcttcctt
ccaggggactatagagtagtctatagagggaagataggctagaggtcagg
atggcctttccttttctttcacttgatcccttttgaaggaaaggcacagt
ttatttaagtcatggttccgcaggggctgtcattagtgacagaccaaaac
agccagacttcacagtttgcactagctttcagccttcggttcagctgcag
gaagtggtgtgtgttttgggggggggg

tcccttatctactaggtgaagcataatctgatctctaggaacaccccaac
tccatttcctaacatactcattgtaggggcctctgagtcatcacagaaca
tacagagagaccaaattctcagcacaatagggatttattaccctgaaact
ataattagggctgcctttggaaagggcaaagaaagcagatatgtggtttt
taacaagaaagagaagtctttactaggatgaattgttgagccctaatttg
atatgttagccaatatagccaaattatgaattttgattgccaggaattag
tactttggtttttttgtttgtttgtttttttggttttggtttgtttgttt
gtttgttttttggttttactactatttgttttatttctatatattttatt
ttttttatatttttatttttgtaattaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_28104957_28105982
seq2: B6Ng01-323F22.b_47_1073 (reverse)

seq1  -CCCCCCCCCCAAACACACA-CACTTCCTGGCAGCTGGAACCGGAGGCTG  48
       ||||||||| ||||||||| |||||||| |||||| |||||| ||||||
seq2  CCCCCCCCCCAAAACACACACCACTTCCT-GCAGCT-GAACCGAAGGCTG  48

seq1  GAAGCTAGTGGCAAACTGTGAAGTCTGGCTGTTTTGGTCTGTCACTAATG  98
       |||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTAGT-GCAAACTGTGAAGTCTGGCTGTTTTGGTCTGTCACTAATG  97

seq1  ACAGCCCCTGCGGAACCATGACTTAA--TAACTGTGCCTTTCCTTCAAAG  146
      ||||||||||||||||||||||||||   |||||||||||||||||||| 
seq2  ACAGCCCCTGCGGAACCATGACTTAAATAAACTGTGCCTTTCCTTCAAAA  147

seq1  GGATTCAAGTGAAAGAAAAGGAAAGGCCATCCTGACCTCTAGCCTATCTT  196
      ||  ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCAAGTGAAAGAAAAGGAAAGGCCATCCTGACCTCTAGCCTATCTT  197

seq1  CCCTCTATAGACTACTCTATAGTCCCCTGGAAGGAAGCCAACTGACAGGG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTATAGACTACTCTATAGTCCCCTGGAAGGAAGCCAACTGACAGGG  247

seq1  TAAGGAAAATAATGGTGCCACTGCAGGAAAGTCATAAACGGAGAGAAAAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAAAATAATGGTGCCACTGCAGGAAAGTCATAAACGGAGAGAAAAG  297

seq1  CCAACAGTTGCTTACTAAGTGACAATGATGACATCAAAACATCATGCACA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGTTGCTTACTAAGTGACAATGATGACATCAAAACATCATGCACA  347

seq1  CTACCTGGAGGTCTTAAGGTGAAGGAAGACCATGCTGAGACTGATTGCTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTGGAGGTCTTAAGGTGAAGGAAGACCATGCTGAGACTGATTGCTA  397

seq1  AGCACCACTGTGCAGCTCTGATTCCAGCCTCTGATCAGCAGTTGTTCAGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCACTGTGCAGCTCTGATTCCAGCCTCTGATCAGCAGTTGTTCAGT  447

seq1  GAAGAATCTCTGTCTTCTAGCACCTCTTCCAGCTGTGGCATCTACCAGAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATCTCTGTCTTCTAGCACCTCTTCCAGCTGTGGCATCTACCAGAA  497

seq1  CGCACACTCATACACGCACGGGGGGAGTCCACAGCGATGTAGAAGCAAAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACACTCATACACGCACGGGGGGAGTCCACAGCGATGTAGAAGCAAAC  547

seq1  GGGTGTAGTTCTGAGGCAGCTCTGACAAGGCACCTGGGATTCTCCAGGCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTAGTTCTGAGGCAGCTCTGACAAGGCACCTGGGATTCTCCAGGCT  597

seq1  GCGAACCAGCAAAGGCACTAGGAGCAGCTCGAATACCCGCTGGGAGGTGG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAACCAGCAAAGGCACTAGGAGCAGCTCGAATACCCGCTGGGAGGTGG  647

seq1  TGGAAGTGGGGGCACAGAATGGATTGGGAGGACAGAGAGCTCTGCAATCC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTGGGGGCACAGAATGGATTGGGAGGACAGAGAGCTCTGCAATCC  697

seq1  AGTTCTCCTGGGGTCACAGCCTCCTGAGCCCTCCAAGGCTGTTGGAGAAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCCTGGGGTCACAGCCTCCTGAGCCCTCCAAGGCTGTTGGAGAAC  747

seq1  TCGACACTTCCTCTCCACCAGTCATTGACGCTGTTTAGTTTAAAATTTTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACACTTCCTCTCCACCAGTCATTGACGCTGTTTAGTTTAAAATTTTG  797

seq1  AGTTCTGAATTTTTTTTTTTGTATCCCAAGGACATATGTCTATTTTGCCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGAATTTTTTTTTTTGTATCCCAAGGACATATGTCTATTTTGCCT  847

seq1  CTTTCCTTTGTTCCCTGCCTTTTATATTTCTTTTCCTCCTTATATTAGGC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTTGTTCCCTGCCTTTTATATTTCTTTTCCTCCTTATATTAGGC  897

seq1  CAAATAGTATATCCCCTGTTCCCTCCATCCTCCATTCCTGCTCCATGGTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAGTATATCCCCTGTTCCCTCCATCCTCCATTCCTGCTCCATGGTC  947

seq1  TGCACTATGGGCATTTTCTTTCTTCTTTTGTTCTCCCTTAGACTCTACCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTATGGGCATTTTCTTTCTTCTTTTGTTCTCCCTTAGACTCTACCT  997

seq1  GAATGATTTCCCCCAGGCTTATGAGAATTC  1026
      ||||||||||||||||||||||||||||||
seq2  GAATGATTTCCCCCAGGCTTATGAGAATTC  1027


seq1: chr16_27991016_27991450
seq2: B6Ng01-323F22.g_65_500

seq1  GAATTCTCCCTTATCTACTAGGTGAAGCATAATCTGATCTCTAGGAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCTTATCTACTAGGTGAAGCATAATCTGATCTCTAGGAACAC  50

seq1  CCCAACTCCATTTCCTAACATACTCATTGTAGGGGCCTCTGAGTCATCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACTCCATTTCCTAACATACTCATTGTAGGGGCCTCTGAGTCATCAC  100

seq1  AGAACATACAGAGAGACCAAATTCTCAGCACAATAGGGATTTATTACCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATACAGAGAGACCAAATTCTCAGCACAATAGGGATTTATTACCCT  150

seq1  GAAACTATAATTAGGGCTGCCTTTGGAAAGGGCAAAGAAAGCAGATATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTATAATTAGGGCTGCCTTTGGAAAGGGCAAAGAAAGCAGATATGT  200

seq1  GGTTTTTAACAAGAAAGAGAAGTCTTTACTAGGATGAATTGTTGAGCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTAACAAGAAAGAGAAGTCTTTACTAGGATGAATTGTTGAGCCCT  250

seq1  AATTTGATATGTTAGCCAATATAGCCAAATTATGAATTTTGATTGCCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGATATGTTAGCCAATATAGCCAAATTATGAATTTTGATTGCCAGG  300

seq1  AATTAGTACTTTGGTTTTTTTGTTTGTTTGTTTTTTTGGTTTTGGTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTACTTTGGTTTTTTTGTTTGTTTGTTTTTTTGGTTTTGGTTTGT  350

seq1  TTGTTTGTTTGTTTTTTGGTTTTACTTCTATTTGTTTTATTTTTTTATAT  400
      |||||||||||||||||||||||||| ||||||||||||||| | |||||
seq2  TTGTTTGTTTGTTTTTTGGTTTTACTACTATTTGTTTTATTTCTATATAT  400

seq1  TTTATTTTTTTTATA-TTTTATTTTTTTAATTAGGT  435
      ||||||||||||||| |||||||||| |||||||||
seq2  TTTATTTTTTTTATATTTTTATTTTTGTAATTAGGT  436


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