BAC Information

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BAC

Clone NameB6Ng01-324G21
Chromosome16 (Build37)
Map Location 32,864,928 - 32,982,327
singlet/doubletdoublet
Overlap gene1700021K19Rik, Fyttd1, Lrch3, EG625660
Upstream geneDlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2, Pigx, 1500031L02Rik, Lrrc33, Bex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20
Downstream geneIqcg, Rpl35a, Lmln, LOC638791, Osbpl11, Snx4, Zfp148, Slc12a8, 4632417D23Rik, Heg1, Muc13, Itgb5, Umps, Kalrn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324G21.bB6Ng01-324G21.g
ACCGA112747GA112748
length1,1981,186
definitionB6Ng01-324G21.b B6Ng01-324G21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,981,135 - 32,982,327)(32,864,928 - 32,866,102)
sequence
gaattctacaatgaaaacagcattgagctggtttagaggaagggagacct
taagcatggtggaaagactgtctatgtagaaggaagaagtaaatacaggg
tttctgaaaatctttccattttctatgcttgaataaacactggatttgga
accaagtaatttcactctttttaaagatggtgttagaacaaaggcagact
gatctagtttaaaatagcctttaaggttcacataagccaaatatcttcat
tatatttggatttgcacaaaataaaatcaattcacttattactaagtttg
aagaaagaaagaattaagctgaattgctttttcaaacctgttttgatgtg
agtatcttttcatgtcttctgttttttgaaactctctaacggctattggc
tttactggtgaaacctagacccccccaaaaaaaagaaagaaaaagaaaag
aaaaagtagtcagtaattaacatgcataatatattaaaatgcagcaatta
catattcaactagtttaacatttaggaaattatacattaaaaatgacttt
ggtaggcttttcctctgtgagcttagtgtttcagagcacccaggctagca
ggtgtgatggtggctgtaactcaggctcaggaagctgaggcaaagaatga
cgtgtttgagcacagcctgagtgacatagcaagactcttatctcaaaaca
caaaacaaaacaagggctggtgaggtgggccagcgtgtaaacaccgatgt
gtaaaaacgcactttctgtgcaaaccccacaacctgagtttgatctccag
agcctaaaaaaaaaatgctgaatgaaaaaaacaattccacaaaattgtct
tcagacctccatgttgtacacactgtggtatgtgtgctgatgtaaacaca
cacacacacacacacacacacacacacacacacaaaaacacaactgtaag
tggtatacctaggctttgataaataagaatatgccacaatctatactgtg
tgtttttgcttacaaggttcctcatcctcactgtagtatataaatagtga
ttaagcagagtgatatttttcagaataagaagaacttttgaaaactcggg
aagggtgggtggcactcgggagccaaaggccagcagatctctggtgagcc
agcctagtctacaagtgactgtagactgccaggcctctgttatagaga
gaattcaaggaacaattagggaagaattcacagaaacgagtgcttgcttg
gataggggacatggggaagagagaagtatgacagtgaggttcgggcttag
ctgactgagtggaaaatgccacagatgggctgaggacacaggaggggagg
gtctggtccactgagtgctcagagtcactaaagtacacctggctatttaa
ttctgactctgtgggcctctgcaccaggaaaactgagcactgggtggagc
tgaactcctagttctcaagtagactgcatcgctcaataaagtccaggctg
cagagcaataatgaaggactcttgctttggatgacagttccttccggcag
acagctggcatttaaggagactccagggaaagagaagtatcagtcagata
gttaactacacggaaaacagtagaggagcctatgattgtaagtgcacttc
tagggtgaagtaggtatctaggtcaacaccccagtctcccacgaacccga
cttagccagagcagccatggaattaggaagaaagagctgccccactgcat
gtggacaacacacctagctcatggaaactgcagactggacacagtacaca
accctttgtactttagtacataccaggcatactgagaggaacttgagctc
attattttatttaattcttaagatctcccagcagggaagaacactgggcc
acagaggcaggactcagtaaaatgagcaaatcgagcacacaagctggatt
ccaccgtagctttgcatataagaaatgaaaagagaagtctgaactttcac
tgcgaggctctggcttggttgactgagtgcaaagtgctatgaactgagat
caaaacagaagagaggcttgtggtaggcttaattatgcacattttcttta
tcaagtgcttggaaaactgtctaatcctttacgcttaacaagtgctgtca
gctcactaagatgacattttgaattgtgtgttgtagtgacatgaaaagat
tatgtttgcagtgcctggcacatgccttaattctcaaacataaggcgtgt
cttttaccaatgttcttattctaaggagttaaagggggccatcagtacaa
ttaaacaacacactctggaacctatttagtcacgttaacagaacgtagcc
ttacaacatacagttgaagcgagtgtaaccgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32981135_32982327
seq2: B6Ng01-324G21.b_48_1245 (reverse)

seq1  TCTCT---ACAGAGCCCTGGCAGTCCTACAACTCACTCTGTAGACTAGGC  47
      |||||   |||||| ||||||||| |||| | ||||| ||||||||||||
seq2  TCTCTATAACAGAGGCCTGGCAGT-CTAC-AGTCACT-TGTAGACTAGGC  47

seq1  TGGCCTCA-CAGAGATCTGCCTGCCTCTGCCTCCCGAGTGCCCACCACC-  95
      ||| |||| |||||||||||  |||| || ||||||||||||  ||||| 
seq2  TGG-CTCACCAGAGATCTGCTGGCCTTTGGCTCCCGAGTGCCACCCACCC  96

seq1  -TCCC-CGGTCTCAAAAGTCCTTCTTATTCTG-AAAATATCACTCTGCTT  142
       ||||  | | |||||||| |||||||||||| |||||||||||||||||
seq2  TTCCCGAGTTTTCAAAAGTTCTTCTTATTCTGAAAAATATCACTCTGCTT  146

seq1  AATCACTAATTTATATACTACAGTGA-GATGA-GAACCTTGTAAGC-AAA  189
      ||||||| |||||||||||||||||| ||||| ||||||||||||| |||
seq2  AATCACT-ATTTATATACTACAGTGAGGATGAGGAACCTTGTAAGCAAAA  195

seq1  ACACACAGTTATAGATTGT-GCATATTCTTATTTATCAAAGCCTAGGTAA  238
      |||||||| |||||||||| |||||||||||||||||||||||||||| |
seq2  ACACACAG-TATAGATTGTGGCATATTCTTATTTATCAAAGCCTAGGT-A  243

seq1  TACCACTTACAGTTGTG-TTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  287
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TACCACTTACAGTTGTGTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  293

seq1  GTGTGTGTGTTTACATCAGCACACATACCACAGTGTGTACAACATGGAGG  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTTTACATCAGCACACATACCACAGTGTGTACAACATGGAGG  343

seq1  TCTGAAGACAATTTTGTGGAATTGTTTTTTTTCATTCAGCATTTTTTTTT  387
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCTGAAGACAATTTTGTGGAATTG-TTTTTTTCATTCAGCATTTTTTTTT  392

seq1  TAGGCTCTGGAGATCAAACTCAGGTTGTGGGGTTTGCACAGAAAGTGCGT  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTCTGGAGATCAAACTCAGGTTGTGGGGTTTGCACAGAAAGTGCGT  442

seq1  TTTTACACATCGGTGTTTACACGCTGGCCCACCTCACCAGCCCTTGTTTT  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACACATCGGTGTTTACACGCTGGCCCACCTCACCAGCCCTTGTTTT  492

seq1  GTTTTGTGTTTTGAGATAAGAGTCTTGCTATGTCACTCAGGCTGTGCTCA  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTGTTTTGAGATAAGAGTCTTGCTATGTCACTCAGGCTGTGCTCA  542

seq1  AACACGTCATTCTTTGCCTCAGCTTCCTGAGCCTGAGTTACAGCCACCAT  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACGTCATTCTTTGCCTCAGCTTCCTGAGCCTGAGTTACAGCCACCAT  592

seq1  CACACCTGCTAGCCTGGGTGCTCTGAAACACTAAGCTCACAGAGGAAAAG  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCTGCTAGCCTGGGTGCTCTGAAACACTAAGCTCACAGAGGAAAAG  642

seq1  CCTACCAAAGTCATTTTTAATGTATAATTTCCTAAATGTTAAACTAGTTG  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCAAAGTCATTTTTAATGTATAATTTCCTAAATGTTAAACTAGTTG  692

seq1  AATATGTAATTGCTGCATTTTAATATATTATGCATGTTAATTACTGACTA  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTAATTGCTGCATTTTAATATATTATGCATGTTAATTACTGACTA  742

seq1  CTTTTTCTTTTCTTTTTCTTTCTTTTTTTTGGGGGGGTCTAGGTTTCACC  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTTTTCTTTTTCTTTCTTTTTTTTGGGGGGGTCTAGGTTTCACC  792

seq1  AGTAAAGCCAATAGCCGTTAGAGAGTTTCAAAAAACAGAAGACATGAAAA  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGCCAATAGCCGTTAGAGAGTTTCAAAAAACAGAAGACATGAAAA  842

seq1  GATACTCACATCAAAACAGGTTTGAAAAAGCAATTCAGCTTAATTCTTTC  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTCACATCAAAACAGGTTTGAAAAAGCAATTCAGCTTAATTCTTTC  892

seq1  TTTCTTCAAACTTAGTAATAAGTGAATTGATTTTATTTTGTGCAAATCCA  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCAAACTTAGTAATAAGTGAATTGATTTTATTTTGTGCAAATCCA  942

seq1  AATATAATGAAGATATTTGGCTTATGTGAACCTTAAAGGCTATTTTAAAC  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAATGAAGATATTTGGCTTATGTGAACCTTAAAGGCTATTTTAAAC  992

seq1  TAGATCAGTCTGCCTTTGTTCTAACACCATCTTTAAAAAGAGTGAAATTA  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCAGTCTGCCTTTGTTCTAACACCATCTTTAAAAAGAGTGAAATTA  1042

seq1  CTTGGTTCCAAATCCAGTGTTTATTCAAGCATAGAAAATGGAAAGATTTT  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTCCAAATCCAGTGTTTATTCAAGCATAGAAAATGGAAAGATTTT  1092

seq1  CAGAAACCCTGTATTTACTTCTTCCTTCTACATAGACAGTCTTTCCACCA  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACCCTGTATTTACTTCTTCCTTCTACATAGACAGTCTTTCCACCA  1142

seq1  TGCTTAAGGTCTCCCTTCCTCTAAACCAGCTCAATGCTGTTTTCATTGTA  1187
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAAGGTCTCCCTTCCTCTAAACCAGCTCAATGCTGTTTTCATTGTA  1192

seq1  GAATTC  1193
      ||||||
seq2  GAATTC  1198

seq1: chr16_32864928_32866102
seq2: B6Ng01-324G21.g_67_1252

seq1  GAATTCAAGGAACAATTAGGGAAGAATTCACAGAAACGAGTGCTTGCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGAACAATTAGGGAAGAATTCACAGAAACGAGTGCTTGCTTG  50

seq1  GATAGGGGACATGGGGAAGAGAGAAGTATGACAGTGAGGTTCGGGCTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGGGACATGGGGAAGAGAGAAGTATGACAGTGAGGTTCGGGCTTAG  100

seq1  CTGACTGAGTGGAAAATGCCACAGATGGGCTGAGGACACAGGAGGGGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGAGTGGAAAATGCCACAGATGGGCTGAGGACACAGGAGGGGAGG  150

seq1  GTCTGGTCCACTGAGTGCTCAGAGTCACTAAAGTACACCTGGCTATTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGTCCACTGAGTGCTCAGAGTCACTAAAGTACACCTGGCTATTTAA  200

seq1  TTCTGACTCTGTGGGCCTCTGCACCAGGAAAACTGAGCACTGGGTGGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACTCTGTGGGCCTCTGCACCAGGAAAACTGAGCACTGGGTGGAGC  250

seq1  TGAACTCCTAGTTCTCAAGTAGACTGCATCGCTCAATAAAGTCCAGGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCCTAGTTCTCAAGTAGACTGCATCGCTCAATAAAGTCCAGGCTG  300

seq1  CAGAGCAATAATGAAGGACTCTTGCTTTGGATGACAGTTCCTTCCGGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCAATAATGAAGGACTCTTGCTTTGGATGACAGTTCCTTCCGGCAG  350

seq1  ACAGCTGGCATTTAAGGAGACTCCAGGGAAAGAGAAGTATCAGTCAGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGGCATTTAAGGAGACTCCAGGGAAAGAGAAGTATCAGTCAGATA  400

seq1  GTTAACTACACGGAAAACAGTAGAGGAGCCTATGATTGTAAGTGCACTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACTACACGGAAAACAGTAGAGGAGCCTATGATTGTAAGTGCACTTC  450

seq1  TAGGGTGAAGTAGGTATCTAGGTCAACACCCCAGTCTCCCACGAACCCGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTGAAGTAGGTATCTAGGTCAACACCCCAGTCTCCCACGAACCCGA  500

seq1  CTTAGCCAGAGCAGCCATGGAATTAGGAAGAAAGAGCTGCCCCACTGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCCAGAGCAGCCATGGAATTAGGAAGAAAGAGCTGCCCCACTGCAT  550

seq1  GTGGACAACACACCTAGCTCATGGAAACTGCAGACTGGACACAGTACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACAACACACCTAGCTCATGGAAACTGCAGACTGGACACAGTACACA  600

seq1  ACCCTTTGTACTTTAGTACATACCAGGCATACTGAGAGGAACTTGAGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTGTACTTTAGTACATACCAGGCATACTGAGAGGAACTTGAGCTC  650

seq1  ATTATTTTATTTAATTCTTAAGATCTCCCAGCAGGGAAGAACACTGGGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTATTTAATTCTTAAGATCTCCCAGCAGGGAAGAACACTGGGCC  700

seq1  ACAGAGGCAGGACTCAGTAAAATGAGCAAATCGAGCACACAAGCTGGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGCAGGACTCAGTAAAATGAGCAAATCGAGCACACAAGCTGGATT  750

seq1  CCACCGTAGCTTTGCATATAAGAAATGAAAAGAGAAGTCTGAACTTTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCGTAGCTTTGCATATAAGAAATGAAAAGAGAAGTCTGAACTTTCAC  800

seq1  TGCGAGGCTCTGGCTTGGTTGACTGAGTGCAAAGTGCTATGAACTGAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGAGGCTCTGGCTTGGTTGACTGAGTGCAAAGTGCTATGAACTGAGAT  850

seq1  CAAAACAGAAGAGAGGCTTGTGGTAGGCTTAATTATGCACA-TTTCTTTA  899
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CAAAACAGAAGAGAGGCTTGTGGTAGGCTTAATTATGCACATTTTCTTTA  900

seq1  TCAAGTGCTTGGAAAACTGTCT-ATCCTTTACGCTTAACAAGTGCTGTCA  948
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCAAGTGCTTGGAAAACTGTCTAATCCTTTACGCTTAACAAGTGCTGTCA  950

seq1  GCTCACTAAGATGACATTTTGAATTGTGTGTTGTAGTGACCATGAAAAGA  998
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GCTCACTAAGATGACATTTTGAATTGTGTGTTGTAGTGA-CATGAAAAGA  999

seq1  TTATGTTTGCAGTGGCCTGGCCACAATGCCTTAATTCTCAAACATAAGGC  1048
      ||||||||||||| |||||| ||| |||||||||||||||||||||||||
seq2  TTATGTTTGCAGT-GCCTGG-CAC-ATGCCTTAATTCTCAAACATAAGGC  1046

seq1  GTGTC-TTTACCAATG-TCT--ATCTAAGGAGTT-AAGGGGGCCATCAGT  1093
      ||||| |||||||||| |||   ||||||||||| |||||||||||||||
seq2  GTGTCTTTTACCAATGTTCTTATTCTAAGGAGTTAAAGGGGGCCATCAGT  1096

seq1  ACCATTAAAC-ACACACTCTG--AACTAATTAGTCAC--TAACAGACAGT  1138
      || ||||||| ||||||||||  | ||| ||||||||  |||||||  ||
seq2  ACAATTAAACAACACACTCTGGAACCTATTTAGTCACGTTAACAGAACGT  1146

seq1  AGCTTTACAACA-ACAGTTTGAGCGAGTG--ACCGTGTGT  1175
      ||| |||||||| ||||||  ||||||||  |||||||||
seq2  AGCCTTACAACATACAGTTGAAGCGAGTGTAACCGTGTGT  1186