BAC Information

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BAC

Clone NameB6Ng01-324K07
Chromosome16 (Build37)
Map Location 78,855,833 - 78,856,980
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC435483, LOC100039561, Cxadr, Btg3, D16Ertd472e, LOC100039605, 4930570E03Rik
Downstream geneChodl, Prss7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324K07.bB6Ng01-324K07.g
ACCGA112903GA112904
length1,1611,042
definitionB6Ng01-324K07.b B6Ng01-324K07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagtactgtaccctattttttaatagggttatttggtt
cactggagtctaccttattgagttctttgtatatattggatattagacct
ctagcagatgtaggattggtaaagatcttttcccaatctgttggttgcct
ttttgtcttctttacagtgtcctttgccttacagaagctttgcaatttta
tgaggtcccatttgtcgattcttgatcttacagcactagtcattggtgtt
cttttcagaaattattcccctgtgcccatgtgctcgagaatcttccccat
tttctcctttattagattcagtgtatctggttttatgtggaggttcttga
tccacttggacttgagctttgtggtagtctaaccaatttagtaagttcaa
ttaattatctctgaaagtatattctgcataattaactgatggtatgctgt
agtaaacagtttactaaatgcagttactttatatttaagatatgaaacaa
ttctacgtaaactgtgaataaaatatacaattcataaaggtttctttaat
tgtgtgcagggaggcataggcttgaacatggcacagtttacacatgataa
agtgagttttctccttccatcatgtgggctccaaaaattgaactcagcac
ttcagccttggcagtgagcacctttgtccaataattattgtcaatagcca
gacaattgtcataattttaaacacattttaaagtgaacatcattttagaa
ttagtcaaatatggtgaaacttcacatattaagactgaagtcttttctca
tgaatgacaagaggttttcatgttatcccctgtctgtaaaacaccagaga
tttgagattctgagttaaaaaaaaagtcccttttgtacagtgaatcagta
aagggttgtccaatttgtcatatcttcatgctacaaggtatgaatttaca
aatcctgtgtatcaaggttttcttataaaaataacagtcacagacaatat
taaagaattaaatgattactttcctagaaaggacagaagaactgaccata
gataacatggacttgtgctatttaaaattctctcagcttttagagctggg
gctatcacctcaggttgtagaggtgccttgccctaacatgggtggacaca
tacctataact

gaattctcacctgaggaatacagaatggcagagaagcacctgaaaaaatg
ttcaacttccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcaaaccagtcagaatggctaagatcaaaaattcaggtgacagc
cgatgctggcgatgatgtagagaaagaggaacactcctccatttttttgt
gggtttgcaagcttgtacagccactctggaaagcagtctggagtttcctc
agaaaattggacatagaactaccggaggatcctgcaatacctttcctggg
catatatccagaagatgtcccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaaaaacccaga
agcccctcaacagaggaatggatacagaaaatgtggtacatttacacaat
ggagtaccactcagctattaagaagaacgaatttatgaaattcctaggca
aatggatggacctggagggcatcatcctgagtgaggtaacccaatcacaa
aggaactcacacaatatgtactcactgataagtggatattagcccagaaa
cttaggatacccaagatataagatacaatttgctaaacgcatgaaactca
agaagaaggaagccaaagaaggacactttgcgccttcttagaattgggaa
caaaacacccatggcagatgtagctgtctcttgtgagactatgccggggc
ctagcaaacacagaagtggatgctcacagtcagctaatggatggatcaca
ggactcctaatggaggagctagagaaattacccaaggagctaaagggatc
tgcaaccctataggtggaacaacattatgaactaaccagtaccccgaagc
tcttgactctagctgcatatgtatcaaagatggcctagttgggccatcac
tggaaagagaggcccattggacttgcaaactttatatgcccagtacaggg
gacgcagggccaaaagggggagtggggtgggggtaggggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_78855833_78856980
seq2: B6Ng01-324K07.b_44_1204 (reverse)

seq1  AGTTATAGGTATGTG-CCA-CCATGTTA-GGCAA-GCA-CTCTACCAACT  45
      ||||||||||||||| ||| |||||||| ||||| ||| |||||| | ||
seq2  AGTTATAGGTATGTGTCCACCCATGTTAGGGCAAGGCACCTCTACAACCT  50

seq1  GA-GTGATAGCCCCAGCTCTAAAAGCTGAGA----TTTTAATAGCACAAG  90
      || ||||||||||||||||||||||||||||    ||| |||||||||||
seq2  GAGGTGATAGCCCCAGCTCTAAAAGCTGAGAGAATTTTAAATAGCACAAG  100

seq1  TCCATGTTATTCTATGGTCAGTTC-TCTGTCCTTTCTAGG-AAGTTATCA  138
      ||||||||| |||||||||||||| ||||||||||||||| |||| ||||
seq2  TCCATGTTA-TCTATGGTCAGTTCTTCTGTCCTTTCTAGGAAAGTAATCA  149

seq1  TTTAATTCTTTAATATTGTCTGTGACTG-TATTTTTATAAG-AAACCCTG  186
      |||||||||||||||||||||||||||| |||||||||||| ||||| ||
seq2  TTTAATTCTTTAATATTGTCTGTGACTGTTATTTTTATAAGAAAACCTTG  199

seq1  ATACACAGGATTTGTAAATTCATACCTTGTAGCATGAAGATATGACAAAT  236
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAGGATTTGTAAATTCATACCTTGTAGCATGAAGATATGACAAAT  249

seq1  TGGACAACCCTTTACTGATTCACTGTACAAAAGGGACTTTTTTTTTAACT  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAACCCTTTACTGATTCACTGTACAAAAGGGACTTTTTTTTTAACT  299

seq1  CAGAATCTCAAATCTCTGGTGTTTTACAGACAGGGGATAACATGAAAACC  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCTCAAATCTCTGGTGTTTTACAGACAGGGGATAACATGAAAACC  349

seq1  TCTTGTCATTCATGAGAAAAGACTTCAGTCTTAATATGTGAAGTTTCACC  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTCATTCATGAGAAAAGACTTCAGTCTTAATATGTGAAGTTTCACC  399

seq1  ATATTTGACTAATTCTAAAATGATGTTCACTTTAAAATGTGTTTAAAATT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGACTAATTCTAAAATGATGTTCACTTTAAAATGTGTTTAAAATT  449

seq1  ATGACAATTGTCTGGCTATTGACAATAATTATTGGACAAAGGTGCTCACT  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAATTGTCTGGCTATTGACAATAATTATTGGACAAAGGTGCTCACT  499

seq1  GCCAAGGCTGAAGTGCTGAGTTCAATTTTTGGAGCCCACATGATGGAAGG  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGGCTGAAGTGCTGAGTTCAATTTTTGGAGCCCACATGATGGAAGG  549

seq1  AGAAAACTCACTTTATCATGTGTAAACTGTGCCATGTTCAAGCCTATGCC  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACTCACTTTATCATGTGTAAACTGTGCCATGTTCAAGCCTATGCC  599

seq1  TCCCTGCACACAATTAAAGAAACCTTTATGAATTGTATATTTTATTCACA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCACACAATTAAAGAAACCTTTATGAATTGTATATTTTATTCACA  649

seq1  GTTTACGTAGAATTGTTTCATATCTTAAATATAAAGTAACTGCATTTAGT  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACGTAGAATTGTTTCATATCTTAAATATAAAGTAACTGCATTTAGT  699

seq1  AAACTGTTTACTACAGCATACCATCAGTTAATTATGCAGAATATACTTTC  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTTTACTACAGCATACCATCAGTTAATTATGCAGAATATACTTTC  749

seq1  AGAGATAATTAATTGAACTTACTAAATTGGTTAGACTACCACAAAGCTCA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATAATTAATTGAACTTACTAAATTGGTTAGACTACCACAAAGCTCA  799

seq1  AGTCCAAGTGGATCAAGAACCTCCACATAAAACCAGATACACTGAATCTA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAAGTGGATCAAGAACCTCCACATAAAACCAGATACACTGAATCTA  849

seq1  ATAAAGGAGAAAATGGGGAAGATTCTCGAGCACATGGGCACAGGGGAATA  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGAGAAAATGGGGAAGATTCTCGAGCACATGGGCACAGGGGAATA  899

seq1  ATTTCTGAAAAGAACACCAATGACTAGTGCTGTAAGATCAAGAATCGACA  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAAAAGAACACCAATGACTAGTGCTGTAAGATCAAGAATCGACA  949

seq1  AATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAGGACACTGTA  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAGGACACTGTA  999

seq1  AAGAAGACAAAAAGGCAACCAACAGATTGGGAAAAGATCTTTACCAATCC  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGACAAAAAGGCAACCAACAGATTGGGAAAAGATCTTTACCAATCC  1049

seq1  TACATCTGCTAGAGGTCTAATATCCAATATATACAAAGAACTCAATAAGG  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCTGCTAGAGGTCTAATATCCAATATATACAAAGAACTCAATAAGG  1099

seq1  TAGACTCCAGTGAACCAAATAACCCTATTAAAAAATAGGGTACAGTACTA  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTCCAGTGAACCAAATAACCCTATTAAAAAATAGGGTACAGTACTA  1149

seq1  AACAAAGAATTC  1148
      ||||||||||||
seq2  AACAAAGAATTC  1161


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