BAC Information

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BAC

Clone NameB6Ng01-324L04
Chromosome16 (Build37)
Map Location 50,683,459 - 50,684,559
singlet/doubletsinglet
Overlap geneLOC672778
Upstream geneIft57, LOC667796, LOC100043767, Cd47, EG433024, LOC100043769, LOC628951, EG224180, EG667802, LOC100043404, Bbx, LOC100043414, Ccdc54
Downstream gene5330426P16Rik, EG639820, LOC627543
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324L04.bB6Ng01-324L04.g
ACCGA112945GA112946
length1,0921,194
definitionB6Ng01-324L04.b B6Ng01-324L04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactatggaggggccaggctagccttgcactcagaaatgtgcatg
atctctgcctctgctggaattaaattcatgtaccaccaccattctggttc
ctcagtgttttcaaaggacaagtgttcacttgtaagcattgtgacaatcc
tctggcctctgacccaacaggagacacctacagccaatggaaatgtctcc
ttctttcccttttaaattcctgttctgtctcatgaatgtttacagttttt
tccttatgcatttcagtttaaaagtttggctatatatattggcacaggca
atatatatagtcaaacttttttacggttgtgttggggactatttgatttc
ttttgtctataaatgtatgaggttctctaacactggatatttttagacat
cctgtgatggtttgtatatccttggaccagggagtggcaccatttgaagg
tgtggccttgttggaataggtgtgacctggttggaatgggtgtgtcactg
tgggtgtgggtataagatcctcaccctagttgcctggaagtcagtcttcc
actagcagcctttggatgaagacatagaactctcagctcctcctgtgcca
tgcctgcctggatactgccatgctcccaccttgatgataatggactgaac
ctctgaacctgtaagccagccccaattaaatgttgtttttttataagact
tgccttggtcatggtgtctgttcacagcagtaaaaccctaactaagacac
atcctttcctcaaatggtattatagtattcgttttctcttcccttatgga
gctccaactacacaaatgtgggatcttttgataattcccctaaggtactc
ttccctgtcatctccactctgttattaaacatatccagtgcttttctgtc
aactcttatatttatctcagattttatattatcaatgaagtattttttat
taatggttgggaataataaagcctctagtcaggtcaggggatatataaat
tagacttttagtaactgtgtgtgggtgtcgttgagaactgtccacacttt
tcaacatgcttttcactggtcatttgaccactgtcttcttcc

gaattccaggaccccagactctttggaggcccgagacccctgagccagct
ccggctgttccatgtctcagactgcacttccctacagcccagcacacacc
cagcaatggtgtggggtaagcccagtccaactccctgcatactgcctccc
caggcagtggtgtttgaccgcgggacccacaaccctacaaaagtaaactt
aaatttataatcagtgcagaaagagcttcctagaaacgggtgagtttgat
gacttgattccctgtactacaattcaccatgggcaactgaaacacaatgg
atatgatgtttctcacagtccaagactaaaagaaaaatcgggaattcact
ctaaaacgggacgacaactttgaggctgtctctggagtaagtgttgtcaa
ttgacatcagtttggagcagataggtaaacatgactcagtgcccgagcta
caaaattgcacaactttctcaaacacattttcacctgtgccctaagcagt
ttttcttttgttaataatttatttttatatttgaaaatctcatatatttc
ctcccccctgttttgtttgtttactaacccactaattgcaattagtgctg
ttcatatgtgcatgggtatagggccatcctcaggagcgttggaaacttct
agtgtctacatccttaagagaatggttccccttccatgggcaactgccac
tgccaagaacttcttcagtaacaagtaaggcctgaagagttcttccttcc
ccatcttttcagacattcggactggcttgacgttttgcaggtcctgtcca
ggatttcatgaagtgtcctactatgtccagacgatagcatttcacaatcc
ttccctccatcctcaggctcttgtttttctttctgcctcttcttccaaga
ctttccctgatccatagagtggagagacgataaaggatgtcctgtttaac
cataagtactcaatctcttattttaaatctagatcccacacatggaggag
aaacatagggtatttatctttctggagtcttctgggcttctctacatgat
tctgaatctatccatttttcttcattggtggataaggttccaattttgta
cagggtaacacatttggtttttatctatcagctgtccatggacatctacc
tgcttctgccttccctagaggtttataaattccataatatgtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_50683459_50684559
seq2: B6Ng01-324L04.b_47_1138

seq1  GAATTCACTATGGAGGGGCCAGGCTAGCCTTGCACTCAGAAATGTGCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGGAGGGGCCAGGCTAGCCTTGCACTCAGAAATGTGCATG  50

seq1  ATCTCTGCCTCTGCTGGAATTAAATTCATGTACCACCACCATTCTGGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGCCTCTGCTGGAATTAAATTCATGTACCACCACCATTCTGGTTC  100

seq1  CTCAGTGTTTTCAAAGGACAAGTGTTCACTTGTAAGCATTGTGACAATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGTTTTCAAAGGACAAGTGTTCACTTGTAAGCATTGTGACAATCC  150

seq1  TCTGGCCTCTGACCCAACAGGAGACACCTACAGCCAATGGAAATGTCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCCTCTGACCCAACAGGAGACACCTACAGCCAATGGAAATGTCTCC  200

seq1  TTCTTTCCCTTTTAAATTCCTGTTCTGTCTCATGAATGTTTACAGTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCCCTTTTAAATTCCTGTTCTGTCTCATGAATGTTTACAGTTTTT  250

seq1  TCCTTATGCATTTCAGTTTAAAAGTTTGGCTATATATATTGGCACAGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATGCATTTCAGTTTAAAAGTTTGGCTATATATATTGGCACAGGCA  300

seq1  ATATATATAGTCAAACTTTTTTACGGTTGTGTTGGGGACTATTTGATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATAGTCAAACTTTTTTACGGTTGTGTTGGGGACTATTTGATTTC  350

seq1  TTTTGTCTATAAATGTATGAGGTTCTCTAACACTGGATATTTTTAGACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTATAAATGTATGAGGTTCTCTAACACTGGATATTTTTAGACAT  400

seq1  CCTGTGATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATTTGAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATTTGAAGG  450

seq1  TGTGGCCTTGTTGGAATAGGTGTGACCTGGTTGGAATGGGTGTGTCACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCTTGTTGGAATAGGTGTGACCTGGTTGGAATGGGTGTGTCACTG  500

seq1  TGGGTGTGGGTATAAGATCCTCACCCTAGTTGCCTGGAAGTCAGTCTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTGGGTATAAGATCCTCACCCTAGTTGCCTGGAAGTCAGTCTTCC  550

seq1  ACTAGCAGCCTTTGGATGAAGACATAGAACTCTCAGCTCCTCCTGTGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCAGCCTTTGGATGAAGACATAGAACTCTCAGCTCCTCCTGTGCCA  600

seq1  TGCCTGCCTGGATACTGCCATGCTCCCACCTTGATGATAATGGACTGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCCTGGATACTGCCATGCTCCCACCTTGATGATAATGGACTGAAC  650

seq1  CTCTGAACCTGTAAGCCAGCCCCAATTAAATGTTGTTTTTTTATAAGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAACCTGTAAGCCAGCCCCAATTAAATGTTGTTTTTTTATAAGACT  700

seq1  TGCCTTGGTCATGGTGTCTGTTCACAGCAGTAAAACCCTAACTAAGACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGGTCATGGTGTCTGTTCACAGCAGTAAAACCCTAACTAAGACAC  750

seq1  ATCCTTTCCTCAAATGGTATTATAGTATTCGTTTTCTCTTCCCTTATGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTCCTCAAATGGTATTATAGTATTCGTTTTCTCTTCCCTTATGGA  800

seq1  GCTCCAACTACACAAATGTGGGATCTTTTGATAATTCCCCTAAGGTACTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAACTACACAAATGTGGGATCTTTTGATAATTCCCCTAAGGTACTC  850

seq1  TTCCCTGTCATCTCCACTCTGTTATTAAACATATCCAGTGCTTTTCTGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGTCATCTCCACTCTGTTATTAAACATATCCAGTGCTTTTCTGTC  900

seq1  AACTCTTATATTTATCTCAGATTTTATATTATCAATGAAGTA-TTTTTAT  949
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AACTCTTATATTTATCTCAGATTTTATATTATCAATGAAGTATTTTTTAT  950

seq1  TAATGGTT-GGAATAATAAAAGCCTCTAGTCAGGTCAGGGGGATATTATA  998
      |||||||| |||||||| ||||||||||||||||||| ||||||| ||||
seq2  TAATGGTTGGGAATAAT-AAAGCCTCTAGTCAGGTCA-GGGGATA-TATA  997

seq1  AATTAGACTTTAAGTAAACTGTGTGTGGGTGTCGTTTGAGAAACTGTCCA  1048
      ||||||||||| ||| |||||||||||||||||| ||||| |||||||||
seq2  AATTAGACTTTTAGT-AACTGTGTGTGGGTGTCG-TTGAG-AACTGTCCA  1044

seq1  CACTTTTTCCAACATGCTTTTCACTGGGTTCATTTGAACCACTGTCTCCT  1098
      |||||||  ||||||||||||||||||  ||||||| |||||||||| ||
seq2  CACTTTT--CAACATGCTTTTCACTGG--TCATTTG-ACCACTGTCTTCT  1089

seq1  TCC  1101
      |||
seq2  TCC  1092


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