BAC Information

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BAC

Clone NameB6Ng01-325B24
Chromosome16 (Build37)
Map Location 64,749,304 - 64,750,445
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha3, LOC100043540, Ckt2
Downstream gene4930453N24Rik, Zfp654, LOC433036, Cggbp1, LOC668242, LOC100043815, LOC677448, Htr1f, LOC668247, LOC672931, Pou1f1, Chmp2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325B24.bB6Ng01-325B24.g
ACCGA113264GA113265
length1,1401,166
definitionB6Ng01-325B24.b B6Ng01-325B24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatatgcctccaatagagacactgaggtgtctcccaagatgcatt
gtcttacttagggttttattgctgtggtcaccaggaccaaggcaactctt
ataaggacaacatttaattggggctggcttacaggttcagaggttcagtc
catcatcatcaccatgatcatcaaggtgggagcatggcagcattcaggca
ggcatgatgcaagaacagctgagagttctacatctccatctgaaggcaaa
caggagaagactggcttccaggcagctaggatttaaagcccacagtgata
catctactccaacaaggccacacccactccaacaaggccacacccactcc
aacaaggccacacatcctaatagtgccacccctgagctaagcacatacaa
accatcacatgcatgacatgagtcccctggaacgactatttgtgtatgct
aaaagagactgttgtacagcaaggtctaagaagggtactgagtaggtggc
caccccttcactctgaagcaatatgaggctatagagatggctttgtggat
tcatagaccactgtggctactgaaaacgttttaatagaatgtggaagcat
gcaatcctttagttaaacccagaatgaggtctagttataacttgtttttt
aaacaaagacatgtttgcatgttaatttaattaattgtgacacatcgtta
cagtctgctgatagttttaaacttcccttcctgtttgtcattctttgagg
gactttcttacctcccgggtatttgctgaacaatagtttctagaaatagc
tactggagaaatgaagtgtagagagatggtttagctttcattggttctcc
accttcagaggcgtcttccttgtcccctaggtttccaaagtgactttgct
ccagtgagtttagtgataaaatgattgttgtgttttacctatagcggctc
ctttgtactttacggaatttaagttacacctttctctgtaactgggagta
accacagcccttgtcaagcacatgtctgttccatacacacctggatcatt
tgggtatccgcgtggcttgattccttatcagaacatttaatatggtgcca
gtccgtcgctcagagttcggagtgctgcctaaatagttct

gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatctttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggaggccatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatatagctgtctcttgtgagactatgcccgggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
tggaggagctagagaaagtagcccaagagctaaagggatctgcaccctat
aggtggaacacattatgaactatcagtacccggagcttcttgactctagc
ttgcatatatatcaaaagatgtcttagtcgtcatcacttgcaaagagagg
gccatggacttgcactttaatgcctagtacaaggacatcagtcaaaaaag
gggaatgtggtcgtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_64749304_64750445
seq2: B6Ng01-325B24.b_47_1186 (reverse)

seq1  AGAACTATTTTAAAGGGGCAGCAACTCTGAATTCTGAGGGAAAGGACTGG  50
      ||||||||||      |||||| |||| ||| |||||| | | |||||||
seq2  AGAACTATTT-----AGGCAGC-ACTCCGAACTCTGAGCG-ACGGACTGG  43

seq1  CACCATA-TAAATGTTCTTGATAAAGAATTCCAGCACAC-TGGATACCCA  98
      ||||||| ||||||||| |||||| ||| || ||| |||  |||||||||
seq2  CACCATATTAAATGTTC-TGATAAGGAA-TCAAGC-CACGCGGATACCCA  90

seq1  AATGATCCAGGTGTGTAAGGGACAGACATGTGCTTGACA--GGCTGTGGT  146
      ||||||||||||||||| || ||||||||||||||||||  |||||||||
seq2  AATGATCCAGGTGTGTATGGAACAGACATGTGCTTGACAAGGGCTGTGGT  140

seq1  TACT-CCAGTTACAGAGAAAGGTGTAAATT-AATTCCGT-AAGTTCAAAG  193
      |||| |||||||||||||||||||||| || |||||||| |||| |||| 
seq2  TACTCCCAGTTACAGAGAAAGGTGTAACTTAAATTCCGTAAAGTACAAA-  189

seq1  GGAGCCGCTATAGGT-AAACACAACAATCATTTTATCACTAAACTCACTG  242
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGAGCCGCTATAGGTAAAACACAACAATCATTTTATCACTAAACTCACTG  239

seq1  GAGCAAAGTCACTTTGGAAACCTAGGGGACAAGGAAGACGCCTCTGAAGG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAAGTCACTTTGGAAACCTAGGGGACAAGGAAGACGCCTCTGAAGG  289

seq1  TGGAGAACCAATG-AAGCTAAACCATCTCTCTACACTTCATTTCTCCAGT  341
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGGAGAACCAATGAAAGCTAAACCATCTCTCTACACTTCATTTCTCCAGT  339

seq1  AGCTATTTCTAGAAACTATTGTTCAGCAAATACCCGGGAGGTAAGAAAGT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATTTCTAGAAACTATTGTTCAGCAAATACCCGGGAGGTAAGAAAGT  389

seq1  CCCTCAAAGAATGACAAACAGGAAGGGAAGTTTAAAACTATCAGCAGACT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAAAGAATGACAAACAGGAAGGGAAGTTTAAAACTATCAGCAGACT  439

seq1  GTAACGATGTGTCACAATTAATTAAATTAACATGCAAACATGTCTTTGTT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACGATGTGTCACAATTAATTAAATTAACATGCAAACATGTCTTTGTT  489

seq1  TAAAAAACAAGTTATAACTAGACCTCATTCTGGGTTTAACTAAAGGATTG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAACAAGTTATAACTAGACCTCATTCTGGGTTTAACTAAAGGATTG  539

seq1  CATGCTTCCACATTCTATTAAAACGTTTTCAGTAGCCACAGTGGTCTATG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTCCACATTCTATTAAAACGTTTTCAGTAGCCACAGTGGTCTATG  589

seq1  AATCCACAAAGCCATCTCTATAGCCTCATATTGCTTCAGAGTGAAGGGGT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCACAAAGCCATCTCTATAGCCTCATATTGCTTCAGAGTGAAGGGGT  639

seq1  GGCCACCTACTCAGTACCCTTCTTAGACCTTGCTGTACAACAGTCTCTTT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACCTACTCAGTACCCTTCTTAGACCTTGCTGTACAACAGTCTCTTT  689

seq1  TAGCATACACAAATAGTCGTTCCAGGGGACTCATGTCATGCATGTGATGG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATACACAAATAGTCGTTCCAGGGGACTCATGTCATGCATGTGATGG  739

seq1  TTTGTATGTGCTTAGCTCAGGGGTGGCACTATTAGGATGTGTGGCCTTGT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATGTGCTTAGCTCAGGGGTGGCACTATTAGGATGTGTGGCCTTGT  789

seq1  TGGAGTGGGTGTGGCCTTGTTGGAGTGGGTGTGGCCTTGTTGGAGTAGAT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTGGGTGTGGCCTTGTTGGAGTGGGTGTGGCCTTGTTGGAGTAGAT  839

seq1  GTATCACTGTGGGCTTTAAATCCTAGCTGCCTGGAAGCCAGTCTTCTCCT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCACTGTGGGCTTTAAATCCTAGCTGCCTGGAAGCCAGTCTTCTCCT  889

seq1  GTTTGCCTTCAGATGGAGATGTAGAACTCTCAGCTGTTCTTGCATCATGC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCCTTCAGATGGAGATGTAGAACTCTCAGCTGTTCTTGCATCATGC  939

seq1  CTGCCTGAATGCTGCCATGCTCCCACCTTGATGATCATGGTGATGATGAT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGAATGCTGCCATGCTCCCACCTTGATGATCATGGTGATGATGAT  989

seq1  GGACTGAACCTCTGAACCTGTAAGCCAGCCCCAATTAAATGTTGTCCTTA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGAACCTCTGAACCTGTAAGCCAGCCCCAATTAAATGTTGTCCTTA  1039

seq1  TAAGAGTTGCCTTGGTCCTGGTGACCACAGCAATAAAACCCTAAGTAAGA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGTTGCCTTGGTCCTGGTGACCACAGCAATAAAACCCTAAGTAAGA  1089

seq1  CAATGCATCTTGGGAGACACCTCAGTGTCTCTATTGGAGGCATATGAATT  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCATCTTGGGAGACACCTCAGTGTCTCTATTGGAGGCATATGAATT  1139

seq1  C  1142
      |
seq2  C  1140


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