BAC Information

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BAC

Clone NameB6Ng01-326N11
Chromosome16 (Build37)
Map Location 82,971,814 - 83,092,467
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665260
Downstream geneEG545172, LOC100039572
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326N11.bB6Ng01-326N11.g
ACCGA114548GA114549
length1,1831,036
definitionB6Ng01-326N11.b B6Ng01-326N11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,971,814 - 82,973,016)(83,091,441 - 83,092,467)
sequence
gaattctactgatctacaaatgaggaaacagtgtccatttgcttaggtta
aaataatagttaagtcagcttgccctgcatcccagaggcctgcttccacc
gaagattaccaggtgagaccccttcaccttaatcccctgtattctgagtc
tactagcaagcccagcagccttaagttctgccctgttccctctctgttcc
atcttctagttcacccacaaccctggaatgttgtagtcatcagggaccag
taggtgagacttctaccccaattccctgtctggcaaccctccacacaaac
tgggcagctgcaaattctgctttatcccctgtgctttccatggctctgct
aaagctctgccagcccacatggagacctcttgccatccaggaaaaacagg
tgagattccccatgattatgttccttgcctactgagtccgccagaaaaca
caaagtcatgagtctgttctgtcccttatgcactccatcttccattccac
acatctacatacaatcccagatacttgcatcattcaggaaacacaagcac
tacatgcaacctgggaagactgttgccacatgagacaaaaagttctacct
gcaatcacagagtccatcaaggaatatggtctttctgattcactgaaagg
cttgttgtcaccccaggcagcaagaactatctgcaatctcagaggtctgc
tgccatcacgaacttacaagcatgccaacaccagaaacaaacagatgact
aaaggcaaacataagagcacagtcaacaaagctagtgtcatgaggcacca
ccataacctagctattctactacagcaatcccaggatatcataacacaca
cgaagtgcaggaaaatgatcttaaatctgatcttctgaagatgatagaga
cctttaaagagtaaaaccatgactaccctatataagtacaagaaaatgca
atcagtagaaacctttaaagagaaacagatagtatgaacagaggaaagta
tatcaaaagtaaagaaataaaactattcagacctgaaatgaaaaagagaa
ataaagaaaacacaaactgagagaatcctgagatgaaagagagacttata
gaacccaaacttcagcagagaataagagaaattgcgaagaaatctcaagc
actgagatcctaaggaagtgatacattcatcaa

gaattcaacttagcttatgcttcagacaatgggccctctgtcatcttagc
agcaaaggcagctctggctcacaaagccaggcctcataggcttcctgaat
ccttgaccagaattttgaattactgacttgtatatcagtggcgacactgt
aaagttctaacagaggcttaagatgtaatcttgttttcatctgtcataaa
tacagtcatttatttataccttggcagctaaaccaaggtgtagagtagac
aaccttgaatattcttagttcagagcctttcctttaaagtgaacttttct
ttccacaaggtgaagactttgataggttagagacctcttgtcatccctct
tgttccagtgaaaaatattggcttatttttcactttaaaaattattgatt
agtagtataaaatatttctcctttcactttaatctttctaaaacttttta
tagttccttctttactctttttcaaatctacggcctcttttatccttaat
tattactgcattcctatatgcatatgtatgtaatatgtaatatatatgta
tgtatgtgtatctgtaggtataggtatatcaatatctgtctctatctatc
tctgtctatctctctttttgtatgtgtgtgttcataaatatgacctggtc
ctggtcaattcacataatgtattcatgttttcaggactaaaaactgtgta
ttggacaagcaattggtgtgctcttccttagagaggacaatatctgtgtt
ttccagcatcctttatttccctgcagttctttgtaaagagctgaattctc
atggacttttccctgtccatttttggtatgtctaatatcactgtccttgt
gttttatttaaagaatggtattcttttccccaatattcaactgatttcct
tacatcagccacgacttacaaattaatattcatccacatctcttcctttt
aagctttacaaaaaaaaaaaattatccagttcccttcattcatagctcct
cagagtagcaagccagtatctttggtattagtttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_82971814_82973016
seq2: B6Ng01-326N11.b_50_1232

seq1  GAATTCTACTGATCTACAAATGAGGAAACAGTGTCCATTTGCTTAGGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTGATCTACAAATGAGGAAACAGTGTCCATTTGCTTAGGTTA  50

seq1  AAATAATAGTTAAGTCAGCTTGCCCTGCATCCCAGAGGCCTGCTTCCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATAGTTAAGTCAGCTTGCCCTGCATCCCAGAGGCCTGCTTCCACC  100

seq1  GAAGATTACCAGGTGAGACCCCTTCACCTTAATCCCCTGTATTCTGAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTACCAGGTGAGACCCCTTCACCTTAATCCCCTGTATTCTGAGTC  150

seq1  TACTAGCAAGCCCAGCAGCCTTAAGTTCTGCCCTGTTCCCTCTCTGTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGCAAGCCCAGCAGCCTTAAGTTCTGCCCTGTTCCCTCTCTGTTCC  200

seq1  ATCTTCTAGTTCACCCACAACCCTGGAATGTTGTAGTCATCAGGGACCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTAGTTCACCCACAACCCTGGAATGTTGTAGTCATCAGGGACCAG  250

seq1  TAGGTGAGACTTCTACCCCAATTCCCTGTCTGGCAACCCTCCACACAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGAGACTTCTACCCCAATTCCCTGTCTGGCAACCCTCCACACAAAC  300

seq1  TGGGCAGCTGCAAATTCTGCTTTATCCCCTGTGCTTTCCATGGCTCTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGCTGCAAATTCTGCTTTATCCCCTGTGCTTTCCATGGCTCTGCT  350

seq1  AAAGCTCTGCCAGCCCACATGGAGACCTCTTGCCATCCAGGAAAAACAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCTGCCAGCCCACATGGAGACCTCTTGCCATCCAGGAAAAACAGG  400

seq1  TGAGATTCCCCATGATTATGTTCCTTGCCTACTGAGTCCGCCAGAAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTCCCCATGATTATGTTCCTTGCCTACTGAGTCCGCCAGAAAACA  450

seq1  CAAAGTCATGAGTCTGTTCTGTCCCTTATGCACTCCATCTTCCATTCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCATGAGTCTGTTCTGTCCCTTATGCACTCCATCTTCCATTCCAC  500

seq1  ACATCTACATACAATCCCAGATACTTGCATCATTCAGGAAACACAAGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTACATACAATCCCAGATACTTGCATCATTCAGGAAACACAAGCAC  550

seq1  TACATGCAACCTGGGAAGACTGTTGCCACATGAGACAAAAAGTTCTACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGCAACCTGGGAAGACTGTTGCCACATGAGACAAAAAGTTCTACCT  600

seq1  GCAATCACAGAGTCCATCAAGGAATATGGTCTTTCTGATTCACTGAAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCACAGAGTCCATCAAGGAATATGGTCTTTCTGATTCACTGAAAGG  650

seq1  CTTGTTGTCACCCCAGGCAGCAAGAACTATCTGCAATCTCAGAGGTCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTGTCACCCCAGGCAGCAAGAACTATCTGCAATCTCAGAGGTCTGC  700

seq1  TGCCATCACGAACTTACAAGCATGCCAACACCAGAAACAAACAGATGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCACGAACTTACAAGCATGCCAACACCAGAAACAAACAGATGACT  750

seq1  AAAGGCAAACATAAGAGCACAGTCAACAAAGCTAGTGTCATGAGGCACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAAACATAAGAGCACAGTCAACAAAGCTAGTGTCATGAGGCACCA  800

seq1  CCATAACCTAGCTATTCTACTACAGCAATCCCAGGATATCATAACACACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAACCTAGCTATTCTACTACAGCAATCCCAGGATATCATAACACACA  850

seq1  CGAAGTGCAGGAAAATGATCTTAAATCTGATCTTCTGAAGATGATAGAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGTGCAGGAAAATGATCTTAAATCTGATCTTCTGAAGATGATAGAGA  900

seq1  CCTTTAAAGAGTAAAACCATGACTACCCTATATAAGGTACAAGAAAATGC  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCTTTAAAGAGTAAAACCATGACTACCCTATATAA-GTACAAGAAAATGC  949

seq1  AATCAGGTAGAAACCTTTAAAGAAGAAACAGATAAGTATGAACAGAGGAA  1000
      ||||| |||||||||||||||| |||||||||| ||||||||||||||||
seq2  AATCA-GTAGAAACCTTTAAAG-AGAAACAGAT-AGTATGAACAGAGGAA  996

seq1  AGTATAATCAAAAAGTAAAAGAAATAAAACTATTCAGGACCTGAAAATGA  1050
      ||||| ||| |||||| ||||||||||||||||||| |||||| ||||||
seq2  AGTAT-ATC-AAAAGT-AAAGAAATAAAACTATTCA-GACCTG-AAATGA  1041

seq1  AAAAAGAAGAAATAAAGAAAACACAAACTGAGAGAATCCTGGAGATGGAA  1100
      ||||   ||||||||||||||||||||||||||||||||| ||||| |||
seq2  AAAA--GAGAAATAAAGAAAACACAAACTGAGAGAATCCT-GAGAT-GAA  1087

seq1  AGAGAAGGAACTATAG-ACACAAACTTCAGCAAGAGAATAAGAGAAATGG  1149
      |||||  ||  ||||| || ||||||||||| |||||||||||||||| |
seq2  AGAGA--GACTTATAGAACCCAAACTTCAGC-AGAGAATAAGAGAAATTG  1134

seq1  CAGAGAGAATCTCAGGCACTGAAGATACTAAAAAGAAAGTGATACATTCA  1199
      |  ||| ||||||| |||||| |||| ||   ||| ||||||||||||||
seq2  CGAAGA-AATCTCAAGCACTG-AGATCCT---AAGGAAGTGATACATTCA  1179

seq1  TCAA  1203
      ||||
seq2  TCAA  1183


seq1: chr16_83091441_83092467
seq2: B6Ng01-326N11.g_65_1100 (reverse)

seq1  CCAAACT-ATACCAAAGATACT-GCTTGCTACTCTGA-GAGCTATGATGA  47
      ||||||| |||||||||||||| |||||||||||||| |||||||||   
seq2  CCAAACTAATACCAAAGATACTGGCTTGCTACTCTGAGGAGCTATGAATG  50

seq1  AAGGGAACT-GATAA-TTTTTTTTTTTGTAAAGCTTAAAAGGAAGAGATG  95
      ||||||||| ||||| ||||||||||||||||||||||||||||||||||
seq2  AAGGGAACTGGATAATTTTTTTTTTTTGTAAAGCTTAAAAGGAAGAGATG  100

seq1  TGGATGAATA-TAATTTGT-AGTCGTGGCTGATGTAAGGAAATCAGTTGA  143
      |||||||||| |||||||| ||||||||||||||||||||||||||||||
seq2  TGGATGAATATTAATTTGTAAGTCGTGGCTGATGTAAGGAAATCAGTTGA  150

seq1  ATATT-GGGAAAAGAATACCATTCTTTAAATAAAACACAAGGACAGTGAT  192
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGGGGAAAAGAATACCATTCTTTAAATAAAACACAAGGACAGTGAT  200

seq1  ATTAGACATACC-AAAATGGACAGGGAAAAGTCCATGAGAATTCAGCTCT  241
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATTAGACATACCAAAAATGGACAGGGAAAAGTCCATGAGAATTCAGCTCT  250

seq1  TTACAAAGAACTGCAGGGAAATAAAGGATGCTGGAAAACACAGATATTGT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAGAACTGCAGGGAAATAAAGGATGCTGGAAAACACAGATATTGT  300

seq1  CCTCTCTAAGGAAGAGCACACCAATTGCTTGTCCAATACACAGTTTTTAG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTAAGGAAGAGCACACCAATTGCTTGTCCAATACACAGTTTTTAG  350

seq1  TCCTGAAAACATGAATACATTATGTGAATTGACCAGGACCAGGTCATATT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAAAACATGAATACATTATGTGAATTGACCAGGACCAGGTCATATT  400

seq1  TATGAACACACACATACAAAAAGAGAGATAGACAGAGATAGATAGAGACA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACACACACATACAAAAAGAGAGATAGACAGAGATAGATAGAGACA  450

seq1  GATATTGATATACCTATACCTACAGATACACATACATACATATATATTAC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTGATATACCTATACCTACAGATACACATACATACATATATATTAC  500

seq1  ATATTACATACATATGCATATAGGAATGCAGTAATAATTAAGGATAAAAG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACATACATATGCATATAGGAATGCAGTAATAATTAAGGATAAAAG  550

seq1  AGGCCGTAGATTTGAAAAAGAGTAAAGAAGGAACTATAAAAAGTTTTAGA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCGTAGATTTGAAAAAGAGTAAAGAAGGAACTATAAAAAGTTTTAGA  600

seq1  AAGATTAAAGTGAAAGGAGAAATATTTTATACTACTAATCAATAATTTTT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTAAAGTGAAAGGAGAAATATTTTATACTACTAATCAATAATTTTT  650

seq1  AAAGTGAAAAATAAGCCAATATTTTTCACTGGAACAAGAGGGATGACAAG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGAAAAATAAGCCAATATTTTTCACTGGAACAAGAGGGATGACAAG  700

seq1  AGGTCTCTAACCTATCAAAGTCTTCACCTTGTGGAAAGAAAAGTTCACTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTCTAACCTATCAAAGTCTTCACCTTGTGGAAAGAAAAGTTCACTT  750

seq1  TAAAGGAAAGGCTCTGAACTAAGAATATTCAAGGTTGTCTACTCTACACC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGAAAGGCTCTGAACTAAGAATATTCAAGGTTGTCTACTCTACACC  800

seq1  TTGGTTTAGCTGCCAAGGTATAAATAAATGACTGTATTTATGACAGATGA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTAGCTGCCAAGGTATAAATAAATGACTGTATTTATGACAGATGA  850

seq1  AAACAAGATTACATCTTAAGCCTCTGTTAGAACTTTACAGTGTCGCCACT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGATTACATCTTAAGCCTCTGTTAGAACTTTACAGTGTCGCCACT  900

seq1  GATATACAAGTCAGTAATTCAAAATTCTGGTCAAGGATTCAGGAAGCCTA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACAAGTCAGTAATTCAAAATTCTGGTCAAGGATTCAGGAAGCCTA  950

seq1  TGAGGCCTGGCTTTGTGAGCCAGAGCTGCCTTTGCTGCTAAGATGACAGA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCTGGCTTTGTGAGCCAGAGCTGCCTTTGCTGCTAAGATGACAGA  1000

seq1  GGGCCCATTGTCTGAAGCATAAGCTAAGTTGAATTC  1027
      ||||||||||||||||||||||||||||||||||||
seq2  GGGCCCATTGTCTGAAGCATAAGCTAAGTTGAATTC  1036


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