BAC Information

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BAC

Clone NameB6Ng01-327N15
Chromosome16 (Build37)
Map Location 27,492,295 - 27,493,424
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043057, Il1rap, Gm606, Ostn, Uts2d, Ccdc50
Downstream geneFgf12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327N15.bB6Ng01-327N15.g
ACCGA115275GA115276
length1,1271,165
definitionB6Ng01-327N15.b B6Ng01-327N15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaacttcacacggttggggaagtttaccaagatggcttcagagt
agaccaactttacacaagaatttttgtccataggaagctctagggaaatc
tgacaaaaaaagtgttttttctatacaagacctttacacacacacacaca
cacacacacacacacacacacacacacgaacaggtgttttaaaagtttaa
caggcacagattaaattcaaacagtaggttacacagcatgagccaagtcc
catacacagagacgctaatgatgatttttaacagccatactcctctagat
cttgaggtccctattgtctgggttcactactccagggctagtgagtcact
atcaccactgttatttgttaccttgggtggattatcaaataaaaaatgat
gaaataaaataagcactaatacttcatggaaagacataaaaaattaactt
gtaactactatgtagagggttgtctaacgctgtttgtattctaatgctaa
atgctcttctccaagatttggagtcaacacatagcctttgggacctggcc
cccatgttaattctaattggtggcaaaagatgccagcagccaatagtagg
gggcaagagagataggcaatgtttaggttttctgggttagaaaccttgag
gaaggaagaggaggaaaacaagttaccatgggatagtaagaacatacagt
agagaagcaacgagagctgacatggcctctggtcaaagagaacatggctc
agaggtctgactttttggagttaagagcagccaagatgacacatagtaag
taataatggggttactgataagaagtagattctaacagcatggagggtag
gcagttgcctagctattgtgctccttaaagcatattaaagtataaatgtt
gtgtgtgtccttcatctgggaatataaatggtttaaaggcagtatatttt
tcaatatttgtacagactactaaatgtttgatacactatgtctgtacaat
ttacaacaaacacaatgaatagaggttcactggttttaaactataaaaca
cccttctgcctctgctctgctgctttgctccctttgcttcttctgttcct
tacctccccttgttttccttgatattg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacactagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcattctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactagcatatcccggggatccatcccctaat
cagcttccaaatgctgacaccattgcatacactagcaagattatgctgaa
aaggaccctgatatagctgtctcttgtcagagtatgcctggggcctagca
acatagaagtggatgctcacagtcggctattggatgggatcacatggccc
caatgaagagctagagaagtaccaaagaagctaaagggatctgcaaccta
tagtgacacattatgactaccagtacccccgagctcttgactctagctgc
atatgcatcaaaaggatgctagtcgcatcactgaaagaaaggccatgaac
cgcaactttattggccagttacaggcacgtcagggcattaaggaatgttt
gtgctaatagagcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_27492295_27493424
seq2: B6Ng01-327N15.b_48_1174

seq1  GAATTCTAACTTCACACGGTTGGGGAAGTTTACCAAGATGGCTTCAGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACTTCACACGGTTGGGGAAGTTTACCAAGATGGCTTCAGAGT  50

seq1  AGACCAACTTTACACAAGAATTTTTGTCCATAGGAAGCTCTAGGGAAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAACTTTACACAAGAATTTTTGTCCATAGGAAGCTCTAGGGAAATC  100

seq1  TGACAAAAAAAGTGTTTTTTCTATACAAGACCTTTACACACACACACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAAAAAGTGTTTTTTCTATACAAGACCTTTACACACACACACACA  150

seq1  CACACACACACACACACACACACACACGAACAGGTGTTTTAAAAGTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACGAACAGGTGTTTTAAAAGTTTAA  200

seq1  CAGGCACAGATTAAATTCAAACAGTAGGTTACACAGCATGAGCCAAGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCACAGATTAAATTCAAACAGTAGGTTACACAGCATGAGCCAAGTCC  250

seq1  CATACACAGAGACGCTAATGATGATTTTTAACAGCCATACTCCTCTAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACAGAGACGCTAATGATGATTTTTAACAGCCATACTCCTCTAGAT  300

seq1  CTTGAGGTCCCTATTGTCTGGGTTCACTACTCCAGGGCTAGTGAGTCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGGTCCCTATTGTCTGGGTTCACTACTCCAGGGCTAGTGAGTCACT  350

seq1  ATCACCACTGTTATTTGTTACCTTGGGTGGATTATCAAATAAAAAATGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCACTGTTATTTGTTACCTTGGGTGGATTATCAAATAAAAAATGAT  400

seq1  GAAATAAAATAAGCACTAATACTTCATGGAAAGACATAAAAAATTAACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAAATAAGCACTAATACTTCATGGAAAGACATAAAAAATTAACTT  450

seq1  GTAACTACTATGTAGAGGGTTGTCTAACGCTGTTTGTATTCTAATGCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTACTATGTAGAGGGTTGTCTAACGCTGTTTGTATTCTAATGCTAA  500

seq1  ATGCTCTTCTCCAAGATTTGGAGTCAACACATAGCCTTTGGGACCTGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTTCTCCAAGATTTGGAGTCAACACATAGCCTTTGGGACCTGGCC  550

seq1  CCCATGTTAATTCTAATTGGTGGCAAAAGATGCCAGCAGCCAATAGTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGTTAATTCTAATTGGTGGCAAAAGATGCCAGCAGCCAATAGTAGG  600

seq1  GGGCAAGAGAGATAGGCAATGTTTAGGTTTTCTGGGTTAGAAACCTTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAGAGAGATAGGCAATGTTTAGGTTTTCTGGGTTAGAAACCTTGAG  650

seq1  GAAGGAAGAGGAGGAAAACAAGTTACCATGGGATAGTAAGAACATACAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAGAGGAGGAAAACAAGTTACCATGGGATAGTAAGAACATACAGT  700

seq1  AGAGAAGCAACGAGAGCTGACATGGCCTCTGGTCAAAGAGAACATGGCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGCAACGAGAGCTGACATGGCCTCTGGTCAAAGAGAACATGGCTC  750

seq1  AGAGGTCTGACTTTTTGGAGTTAAGAGCAGCCAAGATGACACATAGTAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTCTGACTTTTTGGAGTTAAGAGCAGCCAAGATGACACATAGTAAG  800

seq1  TAATAATGGGGTTACTGATAAGAAGTAGATTCTAACAGCATGGAGGGTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATGGGGTTACTGATAAGAAGTAGATTCTAACAGCATGGAGGGTAG  850

seq1  GCAGTTGCCTAGCTATTGTGCTCCTTAAAGCATATTAAAGTATAAATGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTGCCTAGCTATTGTGCTCCTTAAAGCATATTAAAGTATAAATGTT  900

seq1  GTGTGTGTCCTTCATCTGGGAATATAAATGGTTT-AAGGCAGTATATTTT  949
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GTGTGTGTCCTTCATCTGGGAATATAAATGGTTTAAAGGCAGTATATTTT  950

seq1  TCAAATATTTTGTACAAGACTACTAAATGTTTGATACACTATGTCTGTAA  999
      || |||| ||||||| |||||||||||||||||||||||||||||||| |
seq2  TC-AATA-TTTGTAC-AGACTACTAAATGTTTGATACACTATGTCTGT-A  996

seq1  CAATTAACAACAAACACAATGAATAGAGGTTCACTGG-TTTAAACTAT-A  1047
      ||||| ||||||||||||||||||||||||||||||| |||||||||| |
seq2  CAATTTACAACAAACACAATGAATAGAGGTTCACTGGTTTTAAACTATAA  1046

seq1  AACAACCTTCTTGCCTCTGCTTCTGCTGCTTTTGCTTCCTTTGCTTCTTC  1097
      |||| ||||| ||||||||| |||||||| |||||| |||||||||||||
seq2  AACACCCTTC-TGCCTCTGC-TCTGCTGC-TTTGCTCCCTTTGCTTCTTC  1093

seq1  TTGTTCTTA-CTCTCTTTGTTTTTCTTGTTATTG  1130
      |  | |||| ||| | ||||||| |||| |||||
seq2  TGTTCCTTACCTCCCCTTGTTTTCCTTGATATTG  1127