BAC Information

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BAC

Clone NameB6Ng01-328B21
Chromosome16 (Build37)
Map Location 74,685,931 - 74,687,072
singlet/doubletsinglet
Overlap genenone
Upstream geneRobo2
Downstream geneLOC665042, D930038D03Rik, Rbm11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328B21.bB6Ng01-328B21.g
ACCGA115465GA115466
length1,0111,129
definitionB6Ng01-328B21.b B6Ng01-328B21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgtggatttatttttttttccattttttattaggtatttaact
catttacattttcaatgctataccaaaagtcccccatatccacccacccc
cactcccctgcccacccactccccctttttggccctggtgttcccctgta
ctggggcatataaagtttgcaagtccaatgggcctctcttttccagtgat
ggccgactaggccatcttttgatatatatgcagctagagtcaagagctcc
ggggtactggttagttcataatgttgttccacttatagggttgcagatcc
ctttagctccttggctactttctctagctcctccattgggagccctatga
tccatccattagctgactgtgagcatccacttctgtgtttgctaggcccc
ggcatagtctcacaagagacagctacatctgggtcctttcaataaaatct
tgctagtgtatgcaatggtgtcagcgtttggatgctgattatggggtgga
tccctggatatggcagtctctacatggtccatcctttcatctcagctcca
aactttggctctgtaactccttccatgggtgttttgttcccaaatctaag
gaggggcatagtgtccacacttcagtcttcattcttcttgagtttcatgt
gtttaacaaattatatcttatatcttgggtatcctaggtttggggctaat
atccacttatcagtgaatacatattgtgtgagtttctttgtgaatgtgtt
acctcactcaggatgatgccctccaggtccatccatttggctaggaactt
cataaattcattctttttaatagctgagtagtactccattgtgtagatgt
accacattttctgtatccattcctctgttgaggggcatctaggttctttc
cagcttctggctattataaataaagctgctatgaacatagtggagcatgt
gtccttcttacctattggggcatcttctggatatatgcccaggagaggta
tgctgggatcc
gaattccccaaagtttagtaaattatcaaattttaaaattttctaaaaaa
tgtaagaaattatcattatttcggattgaaaaatattggtttaggtagaa
aagtaattatattactataatacaattatacctagagggtaataattgac
agaactccaagtttaggagatcattaggagtattatctttatttcttatt
gacatgcatttattgtacatgaatggcattcacaatgataattcaacacg
cataaacagtgtgcactgatacgtttcatcatggattcccctatggcttg
tcaacctctagtaatcactaattcatctctacttatttttatgtcagtcc
atgaaatgtaacctttgtaatttatgcttttgtgtctggcttcttttgct
tagtacaatgcccttctgtcctgtctgctacaaatacagacttatttttc
tttgtgcctaaattaaattctgctatccacatacttacgacatattattt
accaacgtatctgttgatgggtgtagtgttgaattttgctataccatttt
ggctcctggtggatcacaaacacgcacccgcccaggagctatctttgaat
ccgaaatacacacacatacatttttaaaatgcgttggctacctcaaaggc
tgtggactcctaaacgttcccctactgccacagtggccacttaccttcag
tctcacatggttggttttatttcctgtagctcttgcatcctatccttcta
ctccaagccatggcgattctccctcaagaaaccaattggggacaaagacc
ttcagcttcggggcatgcagattcctggttgaatcaaaacattagaacca
atctccagcattgggcagccagatgactctacacttcactattcacagta
ggggtagagtaattatgatattgtgtagacacttcttagacctagcttat
acccataagtgaagtggctggatctagggatgatctacattaattttttt
gaggaactgttgtgtgatctttatatgcttcaatttacattttaccaaat
ttatgagattttctcatctcccatcctcacctgtacttgttttggctttt
gtaggattaagtcaattactgaaatgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_74685931_74687072
seq2: B6Ng01-328B21.g_64_1192 (reverse)

seq1  TCACATTTCCAAGGTTAAAATGACTTA--TCTACAAAAAGCCAAAAACAA  48
      |||||||||  ||    || |||||||   |||| ||||||| |||||||
seq2  TCACATTTC--AG---TAATTGACTTAATCCTAC-AAAAGCC-AAAACAA  43

seq1  GTACAGGTGAGGATGGGAGATGAAGAAAATTCTCATTAAAATTTGGTTAA  98
      |||||||||||||||||||||| |||||| ||||||  |||||||| |||
seq2  GTACAGGTGAGGATGGGAGATG-AGAAAA-TCTCAT--AAATTTGG-TAA  88

seq1  AATGTAAATTGAGGCATATAAAGATCAACACAACAGTTCCTCAAAAAAAT  148
      |||||||||||| ||||||||||||| |||||||||||||||||||||||
seq2  AATGTAAATTGAAGCATATAAAGATC-ACACAACAGTTCCTCAAAAAAAT  137

seq1  TAATGTTAGATTCATCCCTAGATCCAGCCACTTCACTTATGGGTATAAGC  198
      ||||| |||| |||||||||||||||||||||||||||||||||||||||
seq2  TAATG-TAGA-TCATCCCTAGATCCAGCCACTTCACTTATGGGTATAAGC  185

seq1  TAGGTCTAAGAAGTGTCTACACAATATCATAATTACTCTACCCCTACTGT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCTAAGAAGTGTCTACACAATATCATAATTACTCTACCCCTACTGT  235

seq1  GAATAGTGAAGTGTAGAGTCATCTGGCTGCCCAATGCTGGAGATTGGTTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGTGAAGTGTAGAGTCATCTGGCTGCCCAATGCTGGAGATTGGTTC  285

seq1  TAATGTTTTGATTCAACCAGGAATCTGCATGCCCCGAAGCTGAAGGTCTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTTTGATTCAACCAGGAATCTGCATGCCCCGAAGCTGAAGGTCTT  335

seq1  TGTCCCCAATTGGTTTCTTGAGGGAGAATCGCCATGGCTTGGAGTAGAAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCAATTGGTTTCTTGAGGGAGAATCGCCATGGCTTGGAGTAGAAG  385

seq1  GATAGGATGCAAGAGCTACAGGAAATAAAACCAACCATGTGAGACTGAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGATGCAAGAGCTACAGGAAATAAAACCAACCATGTGAGACTGAAG  435

seq1  GTAAGTGGCCACTGTGGCAGTAGGGGAACGTTTAGGAGTCCACAGCCTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTGGCCACTGTGGCAGTAGGGGAACGTTTAGGAGTCCACAGCCTTT  485

seq1  GAGGTAGCCAACGCATTTTAAAAATGTATGTGTGTGTATTTCGGATTCAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAGCCAACGCATTTTAAAAATGTATGTGTGTGTATTTCGGATTCAA  535

seq1  AGATAGCTCCTGGGCGGGTGCGTGTTTGTGATCCACCAGGAGCCAAAATG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGCTCCTGGGCGGGTGCGTGTTTGTGATCCACCAGGAGCCAAAATG  585

seq1  GTATAGCAAAATTCAACACTACACCCATCAACAGATACGTTGGTAAATAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGCAAAATTCAACACTACACCCATCAACAGATACGTTGGTAAATAA  635

seq1  TATGTCGTAAGTATGTGGATAGCAGAATTTAATTTAGGCACAAAGAAAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCGTAAGTATGTGGATAGCAGAATTTAATTTAGGCACAAAGAAAAA  685

seq1  TAAGTCTGTATTTGTAGCAGACAGGACAGAAGGGCATTGTACTAAGCAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTGTATTTGTAGCAGACAGGACAGAAGGGCATTGTACTAAGCAAA  735

seq1  AGAAGCCAGACACAAAAGCATAAATTACAAAGGTTACATTTCATGGACTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCAGACACAAAAGCATAAATTACAAAGGTTACATTTCATGGACTG  785

seq1  ACATAAAAATAAGTAGAGATGAATTAGTGATTACTAGAGGTTGACAAGCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAAATAAGTAGAGATGAATTAGTGATTACTAGAGGTTGACAAGCC  835

seq1  ATAGGGGAATCCATGATGAAACGTATCAGTGCACACTGTTTATGCGTGTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGGAATCCATGATGAAACGTATCAGTGCACACTGTTTATGCGTGTT  885

seq1  GAATTATCATTGTGAATGCCATTCATGTACAATAAATGCATGTCAATAAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATCATTGTGAATGCCATTCATGTACAATAAATGCATGTCAATAAG  935

seq1  AAATAAAGATAATACTCCTAATGATCTCCTAAACTTGGAGTTCTGTCAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGATAATACTCCTAATGATCTCCTAAACTTGGAGTTCTGTCAAT  985

seq1  TATTACCCTCTAGGTATAATTGTATTATAGTAATATAATTACTTTTCTAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACCCTCTAGGTATAATTGTATTATAGTAATATAATTACTTTTCTAC  1035

seq1  CTAAACCAATATTTTTCAATCCGAAATAATGATAATTTCTTACATTTTTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACCAATATTTTTCAATCCGAAATAATGATAATTTCTTACATTTTTT  1085

seq1  AGAAAATTTTAAAATTTGATAATTTACTAAACTTTGGGGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTTTAAAATTTGATAATTTACTAAACTTTGGGGAATTC  1129