BAC Information

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BAC

Clone NameB6Ng01-328P22
Chromosome16 (Build37)
Map Location 28,739,047 - 28,786,094
singlet/doubletdoublet
Overlap geneFgf12
Upstream genenone
Downstream gene1600021P15Rik, EG666717, Hrasls, Atp13a5, Atp13a4, Opa1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328P22.bB6Ng01-328P22.g
ACCGA116096GA116097
length1,166531
definitionB6Ng01-328P22.b B6Ng01-328P22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,739,047 - 28,740,219)(28,785,560 - 28,786,094)
sequence
gaattcttcagactccacgaaagcccaaggctgtgactttgaaccagagg
ttacaaggcagttttgagatatataatatttaaactaaataacaatgctt
tacttattgactactatatgagaatcatatgctaaaccctttcaatatct
tatttagtcttcaaagcaggtcaacaaatagccactaatattagcttgta
tttttatctccattatgtggataggcaaatccaaatgagtgaggttagga
atcttgcccaatgttgtcagctagaatgttagcatacaaaactcaagact
agtcaagctcagaaattgctttgttagcttctctttcttctttaaataaa
ggtcttgtgaatatccaaacacactgctgtgactgagactgaacatattc
acaaacatacccacaaaaatcttcatacatttaagaacagcaggatgtga
taacaactgtaacatccagggatattagtctttacatagctttagttctg
tgcttaatcctgaaactttcctaattatccgcagatattcagagagtaat
cttttaatcttggtagattctgaaagactattcatgcattttccaatcat
catcaccaccaccgccaccaccatcatcgtcgtcgtcatcattatcagct
catcagtctccatgcaagtacttctgtaagtcaagagtcagtagtgcaca
gaagggcagcaggaacatatatatcacagcactgattagtagaaacttac
agagggcaacagtgggttgtagcatttctgctggccatgctagtgtactt
agaggtacgctttgctttgtgaagcgcatgtgttctttaaaagctactga
ataattgaggctttatgatctaaagtccccagggaatctaattttcttaa
aaatgtttacattaattaatgtttttgaaaggcgaatgaaatcaccacct
gcattacataatgtgtaacagacttccctaattcctccggccttcatgat
tcatcattcccacatcctgttccatctctctgtgcaacacgaaggtagaa
tatctgcattttcatcactgtgttcagtccctagagcgtgcacagaaatc
agcactggtgtctggattgaccaaagatcaggcagtcctttacagtgcat
gctatttccatgcagt
actgagggaaaatgaatgtattctggagcatagtgctataacaaaacggt
tgcaggcttcagagaataaatgaataaagtaaaaaaaaaaaatgaagatc
atatcatgactgttaagtgtttttaaattatttttaaatagagggtctcc
aggatgctctctacttctctgcttctctttaagaatggcttctttcatct
cttccgaatcccgtctttctccacatgttagaaaacatgtctgagctggg
cgtggtggctcacgcctttaatcccagcactcgggaggcagaggcaggcg
gatttctgagttcgaggccagcctggtctacaaactgagttccaggacag
ccagggctatacagagaaaccctgtcaccctgtctagagaaaaccaaaaa
aaaaaaaaaaaaagaaagaaagaaagaaagaaagaaagaatgaaagaaat
attttaaataaagaaaacatgtctggaaatatgaatgctgacttacatgc
tgaagttacattccactagcaaggcactaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_28739047_28740219
seq2: B6Ng01-328P22.b_48_1213

seq1  GAATTCTTCAGACTCCACGAAAGCCCAAGGCTGTGACTTTGAACCAGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGACTCCACGAAAGCCCAAGGCTGTGACTTTGAACCAGAGG  50

seq1  TTACAAGGCAGTTTTGAGATATATAATATTTAAACTAAATAACAATGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGGCAGTTTTGAGATATATAATATTTAAACTAAATAACAATGCTT  100

seq1  TACTTATTGACTACTATATGAGAATCATATGCTAAACCCTTTCAATATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATTGACTACTATATGAGAATCATATGCTAAACCCTTTCAATATCT  150

seq1  TATTTAGTCTTCAAAGCAGGTCAACAAATAGCCACTAATATTAGCTTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGTCTTCAAAGCAGGTCAACAAATAGCCACTAATATTAGCTTGTA  200

seq1  TTTTTATCTCCATTATGTGGATAGGCAAATCCAAATGAGTGAGGTTAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATCTCCATTATGTGGATAGGCAAATCCAAATGAGTGAGGTTAGGA  250

seq1  ATCTTGCCCAATGTTGTCAGCTAGAATGTTAGCATACAAAACTCAAGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGCCCAATGTTGTCAGCTAGAATGTTAGCATACAAAACTCAAGACT  300

seq1  AGTCAAGCTCAGAAATTGCTTTGTTAGCTTCTCTTTCTTCTTTAAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGCTCAGAAATTGCTTTGTTAGCTTCTCTTTCTTCTTTAAATAAA  350

seq1  GGTCTTGTGAATATCCAAACACACTGCTGTGACTGAGACTGAACATATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTGTGAATATCCAAACACACTGCTGTGACTGAGACTGAACATATTC  400

seq1  ACAAACATACCCACAAAAATCTTCATACATTTAAGAACAGCAGGATGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACATACCCACAAAAATCTTCATACATTTAAGAACAGCAGGATGTGA  450

seq1  TAACAACTGTAACATCCAGGGATATTAGTCTTTACATAGCTTTAGTTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAACTGTAACATCCAGGGATATTAGTCTTTACATAGCTTTAGTTCTG  500

seq1  TGCTTAATCCTGAAACTTTCCTAATTATCCGCAGATATTCAGAGAGTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAATCCTGAAACTTTCCTAATTATCCGCAGATATTCAGAGAGTAAT  550

seq1  CTTTTAATCTTGGTAGATTCTGAAAGACTATTCATGCATTTTCCAATCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATCTTGGTAGATTCTGAAAGACTATTCATGCATTTTCCAATCAT  600

seq1  CATCACCACCACCGCCACCACCATCATCGTCGTCGTCATCATTATCAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCACCACCGCCACCACCATCATCGTCGTCGTCATCATTATCAGCT  650

seq1  CATCAGTCTCCATGCAAGTACTTCTGTAAGTCAAGAGTCAGTAGTGCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTCTCCATGCAAGTACTTCTGTAAGTCAAGAGTCAGTAGTGCACA  700

seq1  GAAGGGCAGCAGGAACATATATATCACAGCACTGATTAGTAGAAACTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGCAGCAGGAACATATATATCACAGCACTGATTAGTAGAAACTTAC  750

seq1  AGAGGGCAACAGTGGGTTGTAGCATTTCTGCTGGCCATGCTAGTGTACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGCAACAGTGGGTTGTAGCATTTCTGCTGGCCATGCTAGTGTACTT  800

seq1  AGAGGTACGCTTTGCTTTGTGAAGCGCATGTGTTCTTTAAAAGCTACTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTACGCTTTGCTTTGTGAAGCGCATGTGTTCTTTAAAAGCTACTGA  850

seq1  ATAATTGAGGCTTTATGATCTAAAGTCCCCAGGGAATCTAATTTTCTTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGAGGCTTTATGATCTAAAGTCCCCAGGGAATCTAATTTTCTTAA  900

seq1  AAATGTTTACATTAATTAATGTTTTTGAAAGGCGAATGAAATCACCACCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTACATTAATTAATGTTTTTGAAAGGCGAATGAAATCACCACCT  950

seq1  GCATTACATAATGTGTAACAGACTTCCCTAATTTCCCTCCGGCCTTCATG  1000
      |||||||||||||||||||||||||||||||||  |||||||||||||||
seq2  GCATTACATAATGTGTAACAGACTTCCCTAATT--CCTCCGGCCTTCATG  998

seq1  ATTCATCATTCCCACATCCTGTTCCCATCTCTCTGTGCAACACGAAGGTA  1050
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATTCATCATTCCCACATCCTGTT-CCATCTCTCTGTGCAACACGAAGGTA  1047

seq1  AGATATCTGCATTTTCATCACTGTGTTCAGCCCCTAGAAGCGTGCACAGA  1100
        |||||||||||||||||||||||||||| |||||| ||||||||||||
seq2  GAATATCTGCATTTTCATCACTGTGTTCAGTCCCTAG-AGCGTGCACAGA  1096

seq1  AATCAGCACTGGTGTCT-GATTGACAAAAGAATCAGCCAGTCTTTTACAT  1149
      ||||||||||||||||| ||||||| |||| ||||| ||||| |||||| 
seq2  AATCAGCACTGGTGTCTGGATTGACCAAAG-ATCAGGCAGTCCTTTACAG  1145

seq1  TTCCCTGGCTATTTTCCATGCAGT  1173
      |   |  |||| ||||||||||||
seq2  T--GCATGCTA-TTTCCATGCAGT  1166

seq1: chr16_28785560_28786094
seq2: B6Ng01-328P22.g_65_600 (reverse)

seq1  TTAGTGCCTTGCTAGTGGACTGTAACTTCAGCATGTAAGTCAGCATTCAT  50
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTAGTGCCTTGCTAGTGGAATGTAACTTCAGCATGTAAGTCAGCATTCAT  50

seq1  ATTTCCAGACATGTTTTCTTTCTTT-CTTTCTTTCTTTCTTTCTTTCTTT  99
      ||||||||||||||||||||| |||    | |||||||| ||||||||||
seq2  ATTTCCAGACATGTTTTCTTTATTTAAAATATTTCTTTCATTCTTTCTTT  100

seq1  CTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTGGTTTTCTCTAGACA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTGGTTTTCTCTAGACA  150

seq1  GGGTGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCAGTTTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCAGTTTG  200

seq1  TAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGA  250

seq1  GTGCTGGGATTAAAGGCGTGAGCCACCACGCCCAGCTCAGACATGTTTTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGGATTAAAGGCGTGAGCCACCACGCCCAGCTCAGACATGTTTTC  300

seq1  TAACATGTGGAGAAAGACGGGATTCGGAAGAGATGAAAGAAGCCATTCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATGTGGAGAAAGACGGGATTCGGAAGAGATGAAAGAAGCCATTCTT  350

seq1  AAAGAGAAGCAGAGAAGTAGAGAGCATCCTGGAGACCCTCTATTTAAAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAAGCAGAGAAGTAGAGAGCATCCTGGAGACCCTCTATTTAAAAA  400

seq1  TAATTTAAAAACACTTAACAGTCATGATATGATCTTCATTTTTTTTTTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAAAAACACTTAACAGTCATGATATGATCTTCATTTTTTTTTTTT  450

seq1  ACTTTATTCATTTATTCTCTGAAGCCTGCAACCGTTTTGTTATAGCACTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTCATTTATTCTCTGAAGCCTGCAACCGTTTTGTTATAGCACTA  500

seq1  TGCTCCAGAATACATTCATTTTCCCTCAGTGAATTC  535
      ||||||||||||||||||||||||||||||||||||
seq2  TGCTCCAGAATACATTCATTTTCCCTCAGTGAATTC  536