BAC Information

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BAC

Clone NameB6Ng01-330P24
Chromosome16 (Build37)
Map Location 59,640,056 - 59,641,170
singlet/doubletsinglet
Overlap genenone
Upstream geneCpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201, Olfr202, Olfr203, Olfr204, Olfr205, GA_x5J8B7U0478-6-340, Olfr206, Olfr207, Gabrr3, LOC100043803, Mina, BC043118, LOC672884, Arl6
Downstream geneEpha6, LOC100043804, EG668168, LOC668170
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330P24.bB6Ng01-330P24.g
ACCGA117487GA117488
length1,113142
definitionB6Ng01-330P24.b B6Ng01-330P24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatcaaagagatagtggttaagacactggtatatgcactgcggt
agagtgcttttctggtgcctttccaaattccttagtactcctaatgtgga
gtaaggtctagttctggtctcctgactcttgtaaggcaaaaaccagactg
agtgaacaaaacttctatagtttgtacatccaaaggtagtaacataaatg
cccttgttaaaacagaaaatggaaatatactatactctgtggtctagtaa
aattaccctttgtgtatatttcatctttgtcttcaaaaatgtatctaatc
tagtggttttgaggacaaaggaaagaaaaaagtatgcatgtctgaccaat
agatagcacgtgttcaatagataagcttccttcgttgtgaattttttatt
actcaaagaaaatcagctcagttcctgatgtggttgtcctttaacttctg
gccccaaatgcaggggttcctaatttaccaggaactattaaaccgcttct
ctttggctcactttgacaaaacttggatgcttatttgcttatataatatt
ttctctctagacatagaatagagcttatgtctctgattttccccctttag
gcagatattatcagatttttttttttcctacaaagcattaggaggaaact
aaatatataagaacagaccgagcaaccatttttatagtaaatttagatga
catttaaaaattatttttgttggatttattgactttttttatgtttgttt
tgtctgcttatatgtatgtgcaccacaagaatacttggtgcctggagaga
tcagaagagggtatcatatctactgagactggaatcagggaagattgtga
gccaccatgtgggtgctacgactcaaacctgactcctctgcaagagccac
gagtgctctaaaccatggagcccttcttcatccccaacttagtgattttt
aacaacaaagtgaacagttttgttttttgtttatttaagtgtagttgatc
tgctgttttattgtaatagagattaaaggagttcacatgacctcctaatt
ctatttaagttatctagaaaatgttgaaaaaaaatgaatctgaaacagtg
taatatttcagtt
tgtgctcaagctaccaagccctgggtttatttttacctaggtttagaaga
ctttagatagttgcttgtatttctctaggagttttggtctatttatattg
tttgtcttgccagggtcaaaaagtgggagtgggtgggtaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_59640056_59641170
seq2: B6Ng01-330P24.b_51_1163

seq1  GAATTCCATCAAAGAGATAGTGGTTAAGACACTGGTATATGCACTGCGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCAAAGAGATAGTGGTTAAGACACTGGTATATGCACTGCGGT  50

seq1  AGAGTGCTTTTCTGGTGCCTTTCCAAATTCCTTAGTACTCCTAATGTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCTTTTCTGGTGCCTTTCCAAATTCCTTAGTACTCCTAATGTGGA  100

seq1  GTAAGGTCTAGTTCTGGTCTCCTGACTCTTGTAAGGCAAAAACCAGACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGTCTAGTTCTGGTCTCCTGACTCTTGTAAGGCAAAAACCAGACTG  150

seq1  AGTGAACAAAACTTCTATAGTTTGTACATCCAAAGGTAGTAACATAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAACAAAACTTCTATAGTTTGTACATCCAAAGGTAGTAACATAAATG  200

seq1  CCCTTGTTAAAACAGAAAATGGAAATATACTATACTCTGTGGTCTAGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGTTAAAACAGAAAATGGAAATATACTATACTCTGTGGTCTAGTAA  250

seq1  AATTACCCTTTGTGTATATTTCATCTTTGTCTTCAAAAATGTATCTAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACCCTTTGTGTATATTTCATCTTTGTCTTCAAAAATGTATCTAATC  300

seq1  TAGTGGTTTTGAGGACAAAGGAAAGAAAAAAGTATGCATGTCTGACCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGTTTTGAGGACAAAGGAAAGAAAAAAGTATGCATGTCTGACCAAT  350

seq1  AGATAGCACGTGTTCAATAGATAAGCTTCCTTCGTTGTGAATTTTTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGCACGTGTTCAATAGATAAGCTTCCTTCGTTGTGAATTTTTTATT  400

seq1  ACTCAAAGAAAATCAGCTCAGTTCCTGATGTGGTTGTCCTTTAACTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAGAAAATCAGCTCAGTTCCTGATGTGGTTGTCCTTTAACTTCTG  450

seq1  GCCCCAAATGCAGGGGTTCCTAATTTACCAGGAACTATTAAACCGCTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAAATGCAGGGGTTCCTAATTTACCAGGAACTATTAAACCGCTTCT  500

seq1  CTTTGGCTCACTTTGACAAAACTTGGATGCTTATTTGCTTATATAATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCTCACTTTGACAAAACTTGGATGCTTATTTGCTTATATAATATT  550

seq1  TTCTCTCTAGACATAGAATAGAGCTTATGTCTCTGATTTTCCCCCTTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTAGACATAGAATAGAGCTTATGTCTCTGATTTTCCCCCTTTAG  600

seq1  GCAGATATTATCAGATTTTTTTTTTTCCTACAAAGCATTAGGAGGAAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATATTATCAGATTTTTTTTTTTCCTACAAAGCATTAGGAGGAAACT  650

seq1  AAATATATAAGAACAGACCGAGCAACCATTTTTATAGTAAATTTAGATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATAAGAACAGACCGAGCAACCATTTTTATAGTAAATTTAGATGA  700

seq1  CATTTAAAAATTATTTTTGTTGGATTTATTGACTTTTTTTATGTTTGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAAAATTATTTTTGTTGGATTTATTGACTTTTTTTATGTTTGTTT  750

seq1  TGTCTGCTTATATGTATGTGCACCACAAGAATACTTGGTGCCTGGAGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCTTATATGTATGTGCACCACAAGAATACTTGGTGCCTGGAGAGA  800

seq1  TCAGAAGAGGGTATCATATCTACTGAGACTGGAATCAGGGAAGATTGTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGAGGGTATCATATCTACTGAGACTGGAATCAGGGAAGATTGTGA  850

seq1  GCCACCATGTGGGTGCTACGACTCAAACCTGACTCCTCTGCAAGAGCCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCATGTGGGTGCTACGACTCAAACCTGACTCCTCTGCAAGAGCCAC  900

seq1  GAGTGCTCTAAACCATGGAGCCC-TCTTCATCCCCAACTTAGGTGATTTT  949
      ||||||||||||||||||||||| ||||||||||||||||| ||||||||
seq2  GAGTGCTCTAAACCATGGAGCCCTTCTTCATCCCCAACTTA-GTGATTTT  949

seq1  TAACAACAAAAGGTGAACAGTTTTGTTTTTTGTTTATTTAAGTGTAGTTG  999
      ||||||||||  ||||||||||||||||||||||||||||||||||||||
seq2  TAACAACAAA--GTGAACAGTTTTGTTTTTTGTTTATTTAAGTGTAGTTG  997

seq1  ATCTGCTGTTTTATTGTATTAGAGATTAAA-GAGTTCACATGA-CTCCTA  1047
      |||||||||||||||||| ||||||||||| |||||||||||| ||||| 
seq2  ATCTGCTGTTTTATTGTAATAGAGATTAAAGGAGTTCACATGACCTCCT-  1046

seq1  AATTCTATTT-AGTAATCTAGAAAATGTTGAAAAAAAATGAACCCTAAAA  1096
      |||||||||| ||| |||||||||||||||||||||||||||  || |||
seq2  AATTCTATTTAAGTTATCTAGAAAATGTTGAAAAAAAATGAA-TCTGAAA  1095

seq1  CAGTGTAAATATTTCAGTT  1115
      |||||| ||||||||||||
seq2  CAGTGT-AATATTTCAGTT  1113