BAC Information

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BAC

Clone NameB6Ng01-331P10
Chromosome16 (Build37)
Map Location 32,884,331 - 33,000,081
singlet/doubletdoublet
Overlap geneFyttd1, Lrch3, EG625660
Upstream geneMfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2, Pigx, 1500031L02Rik, Lrrc33, Bex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik
Downstream geneIqcg, Rpl35a, Lmln, LOC638791, Osbpl11, Snx4, Zfp148, Slc12a8, 4632417D23Rik, Heg1, Muc13, Itgb5, Umps, Kalrn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331P10.bB6Ng01-331P10.g
ACCGA118198GA118199
length1,1711,176
definitionB6Ng01-331P10.b B6Ng01-331P10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,998,892 - 33,000,081)(32,884,331 - 32,885,495)
sequence
gaattccccagttagtaaggctgagtagctatcttagcatagcttaattc
ctccactgagaagcaaagaagaaaatcctaggtagtccaacgatggaaga
actgttcctaaccctcctggcggggctgcctgactgcctacattgtgatg
atggatttctttcctgtgggccttgtgttctaacccttcctagtattata
ccactgttttgttttctttcttattttttggatttatttatttattttat
gtgtttgctttgcttgcttgtatacacttgtgtgcctggtacccacggaa
gtcagaagaaggcatcaggtccccaggaactggaattacagatgtttgtg
agccatcatgtaggtactgggaaccccgcccagttcttcctcaagagcca
tgtgtttaacctcttgagccttctccagccactgttctccagtccactgt
attgtaaaggtgaatctaaactttcttcaaaatacatgatattggaataa
aacctgatatttaaaatgtctggttcataagtgactggactttcaaggaa
aatgcctcttagtgatacatttcctgatcccataaatgaactcaaagaca
tctgacaggattctgccaacagaacagccaggctgtagacataagtcata
agcctggctccagcctagagccaggggtcaggtcagcaaattgttatcca
taaatggatagaaaagtacaaagagccctttctgcacgattagtctccac
cacatccaactgtaaacaggttgtgaggcttggtggtaagattctttatt
ggctgagccatcttgttggcccttcctagtgaagttctaacagtgtgcat
tgcattgctatgtctactgaatgatcaacaaacattttcaaaagctattt
actatttacactatttacactagtacaaacctctaactgcttgacttgtt
ttaaggcctctaaaacatggcctgagacttatccacacactcaccccgag
tgtcatctatgctcacagctgaacattccttagtgctaactggccattcc
tgccatatttttgtaactgattagtacactctctagatgctgattgatct
ctaggtagttaattctcctttggtattccataggccacgtcatatatgtc
ctcaaatatccatacatgctg
gaattctggtaaggtctaaaatgccgttgtttatggactcgtaatatgtt
cagccatagacttaacacctggagggaatgcaccagtactttcagacttt
tgtttaattctgaaaacctggaaagacattattttctaaaatagctgtta
attgattgttccttaagattctaagttgtttaagaatcccagtttataaa
tagtttaaattatttttagagtttagatttgccaaaggtcttatgtagcc
tgtggtcctgttttccttccccagtgatagtctgatgataactgactcca
gcttgaatgtgttctgtggaagagcatactgcaccatgagataatttact
ctattgtccaactgctctatttaccagaaaattctctatttgaataaaag
catgtctgagtattacagaaagcaaactcacttcttaaacaagaatcctt
tactatgtgaagactgctgttctgcaaagaaaattactataggcagattt
atttatttatttatttatttgtaggcagcgtctcactgtatagccataac
tagctatgtagactaggctggtctcaaactcaaaagaggtctggctgcct
ctgcctcccaagtactgagcgtaaaggcatatacaaccttgcccagcttt
cctccaaactctgtcttaccatccaagaactttatttgtaaattttctaa
aggtggcactctaaattgactgttgtaggtgtaattagatattttatata
tatacatatatacatatatacatatatatatatatatatatagttatttt
ctgatactctgatagttgctttacctataatcattttgttcttaagatag
attgggaacaataaataattcaacacatatattataagtgaactttttag
caactatgccagcatcttagagtaaacctttgttcaaataaaatattttt
ttcacatgaaataaaataactttgccaaattaaccaacttaaattttatt
ctgtattttgaaaagcaaaaattaattctcttagtataacttacatgttt
aaacagtaaatatacccagccatgtctaaaaatacattactggaagaacc
tgggaatcttacagagaactcagcgttcccttaagaatgattcctcttac
ctgtattgtaagcaatgcatggcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32998892_33000081
seq2: B6Ng01-331P10.b_48_1218 (reverse)

seq1  CAGCATGTATGGAATATTGTAGGACATATATATGAAGTGGGCTATGGAAA  50
      |||||||||||| |||||  |||||  |||||||| |||| |||||| ||
seq2  CAGCATGTATGG-ATATTTGAGGAC--ATATATGACGTGGCCTATGG-AA  46

seq1  TACCAAAGGGAACCAATTAACTACCTAGAGAATTCAAATCAGCCTTCTAG  100
      |||||||||     |||||||||||||||||  || |||||| | |||||
seq2  TACCAAAGG---AGAATTAACTACCTAGAGA--TC-AATCAG-CATCTAG  89

seq1  AGAAGTTGTACTAATTCAGTTAC-AAAATATGGGCAGGAATTGGCCAGTT  149
      |||   |||||||| |||||||| ||||||| |||||||| |||||||||
seq2  AGA--GTGTACTAA-TCAGTTACAAAAATAT-GGCAGGAA-TGGCCAGTT  134

seq1  AGCAACTTAAGGAATTGTTCAGCTGTTGAGCATAGATGACACTCGGGGTG  199
      ||||   ||||||| |||||||||| ||||||||||||||||||||||||
seq2  AGCA--CTAAGGAA-TGTTCAGCTG-TGAGCATAGATGACACTCGGGGTG  180

seq1  AGTGTGTGGATAAGTCTCAGGCCATGTTTTAGAGGCCTTAAAACAAGTCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTGGATAAGTCTCAGGCCATGTTTTAGAGGCCTTAAAACAAGTCA  230

seq1  AGCAGTTAGAGGTTTGTACTAGTGTAAATAGTGTAAATAGTAAATAGCTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTTAGAGGTTTGTACTAGTGTAAATAGTGTAAATAGTAAATAGCTT  280

seq1  TTGAAAATGTTTGTTGATCATTCAGTAGACATAGCAATGCAATGCACACT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATGTTTGTTGATCATTCAGTAGACATAGCAATGCAATGCACACT  330

seq1  GTTAGAACTTCACTAGGAAGGGCCAACAAGATGGCTCAGCCAATAAAGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAACTTCACTAGGAAGGGCCAACAAGATGGCTCAGCCAATAAAGAA  380

seq1  TCTTACCACCAAGCCTCACAACCTGTTTACAGTTGGATGTGGTGGAGACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACCACCAAGCCTCACAACCTGTTTACAGTTGGATGTGGTGGAGACT  430

seq1  AATCGTGCAGAAAGGGCTCTTTGTACTTTTCTATCCATTTATGGATAACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGTGCAGAAAGGGCTCTTTGTACTTTTCTATCCATTTATGGATAACA  480

seq1  ATTTGCTGACCTGACCCCTGGCTCTAGGCTGGAGCCAGGCTTATGACTTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTGACCTGACCCCTGGCTCTAGGCTGGAGCCAGGCTTATGACTTA  530

seq1  TGTCTACAGCCTGGCTGTTCTGTTGGCAGAATCCTGTCAGATGTCTTTGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTACAGCCTGGCTGTTCTGTTGGCAGAATCCTGTCAGATGTCTTTGA  580

seq1  GTTCATTTATGGGATCAGGAAATGTATCACTAAGAGGCATTTTCCTTGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTTATGGGATCAGGAAATGTATCACTAAGAGGCATTTTCCTTGAA  630

seq1  AGTCCAGTCACTTATGAACCAGACATTTTAAATATCAGGTTTTATTCCAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAGTCACTTATGAACCAGACATTTTAAATATCAGGTTTTATTCCAA  680

seq1  TATCATGTATTTTGAAGAAAGTTTAGATTCACCTTTACAATACAGTGGAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATGTATTTTGAAGAAAGTTTAGATTCACCTTTACAATACAGTGGAC  730

seq1  TGGAGAACAGTGGCTGGAGAAGGCTCAAGAGGTTAAACACATGGCTCTTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAACAGTGGCTGGAGAAGGCTCAAGAGGTTAAACACATGGCTCTTG  780

seq1  AGGAAGAACTGGGCGGGGTTCCCAGTACCTACATGATGGCTCACAAACAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAACTGGGCGGGGTTCCCAGTACCTACATGATGGCTCACAAACAT  830

seq1  CTGTAATTCCAGTTCCTGGGGACCTGATGCCTTCTTCTGACTTCCGTGGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAATTCCAGTTCCTGGGGACCTGATGCCTTCTTCTGACTTCCGTGGG  880

seq1  TACCAGGCACACAAGTGTATACAAGCAAGCAAAGCAAACACATAAAATAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGGCACACAAGTGTATACAAGCAAGCAAAGCAAACACATAAAATAA  930

seq1  ATAAATAAATCCAAAAAATAAGAAAGAAAACAAAACAGTGGTATAATACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATCCAAAAAATAAGAAAGAAAACAAAACAGTGGTATAATACT  980

seq1  AGGAAGGGTTAGAACACAAGGCCCACAGGAAAGAAATCCATCATCACAAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGGTTAGAACACAAGGCCCACAGGAAAGAAATCCATCATCACAAT  1030

seq1  GTAGGCAGTCAGGCAGCCCCGCCAGGAGGGTTAGGAACAGTTCTTCCATC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCAGTCAGGCAGCCCCGCCAGGAGGGTTAGGAACAGTTCTTCCATC  1080

seq1  GTTGGACTACCTAGGATTTTCTTCTTTGCTTCTCAGTGGAGGAATTAAGC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGACTACCTAGGATTTTCTTCTTTGCTTCTCAGTGGAGGAATTAAGC  1130

seq1  TATGCTAAGATAGCTACTCAGCCTTACTAACTGGGGAATTC  1190
      |||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTAAGATAGCTACTCAGCCTTACTAACTGGGGAATTC  1171

seq1: chr16_32884331_32885495
seq2: B6Ng01-331P10.g_67_1242

seq1  GAATTCTGGTAAGGTCTAAAATGCCGTTGTTTATGGACTCGTAATATGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGTAAGGTCTAAAATGCCGTTGTTTATGGACTCGTAATATGTT  50

seq1  CAGCCATAGACTTAACACCTGGAGGGAATGCACCAGTACTTTCAGACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATAGACTTAACACCTGGAGGGAATGCACCAGTACTTTCAGACTTT  100

seq1  TGTTTAATTCTGAAAACCTGGAAAGACATTATTTTCTAAAATAGCTGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAATTCTGAAAACCTGGAAAGACATTATTTTCTAAAATAGCTGTTA  150

seq1  ATTGATTGTTCCTTAAGATTCTAAGTTGTTTAAGAATCCCAGTTTATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTGTTCCTTAAGATTCTAAGTTGTTTAAGAATCCCAGTTTATAAA  200

seq1  TAGTTTAAATTATTTTTAGAGTTTAGATTTGCCAAAGGTCTTATGTAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTAAATTATTTTTAGAGTTTAGATTTGCCAAAGGTCTTATGTAGCC  250

seq1  TGTGGTCCTGTTTTCCTTCCCCAGTGATAGTCTGATGATAACTGACTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTCCTGTTTTCCTTCCCCAGTGATAGTCTGATGATAACTGACTCCA  300

seq1  GCTTGAATGTGTTCTGTGGAAGAGCATACTGCACCATGAGATAATTTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAATGTGTTCTGTGGAAGAGCATACTGCACCATGAGATAATTTACT  350

seq1  CTATTGTCCAACTGCTCTATTTACCAGAAAATTCTCTATTTGAATAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGTCCAACTGCTCTATTTACCAGAAAATTCTCTATTTGAATAAAAG  400

seq1  CATGTCTGAGTATTACAGAAAGCAAACTCACTTCTTAAACAAGAATCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTGAGTATTACAGAAAGCAAACTCACTTCTTAAACAAGAATCCTT  450

seq1  TACTATGTGAAGACTGCTGTTCTGCAAAGAAAATTACTATAGGCAGATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATGTGAAGACTGCTGTTCTGCAAAGAAAATTACTATAGGCAGATTT  500

seq1  ATTTATTTATTTATTTATTTGTAGGCAGCGTCTCACTGTATAGCCATAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATTTATTTATTTGTAGGCAGCGTCTCACTGTATAGCCATAAC  550

seq1  TAGCTATGTAGACTAGGCTGGTCTCAAACTCAAAAGAGGTCTGGCTGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTATGTAGACTAGGCTGGTCTCAAACTCAAAAGAGGTCTGGCTGCCT  600

seq1  CTGCCTCCCAAGTACTGAGCGTAAAGGCATATACAACCTTGCCCAGCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCCAAGTACTGAGCGTAAAGGCATATACAACCTTGCCCAGCTTT  650

seq1  CCTCCAAACTCTGTCTTACCATCCAAGAACTTTATTTGTAAATTTTCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAAACTCTGTCTTACCATCCAAGAACTTTATTTGTAAATTTTCTAA  700

seq1  AGGTGGCACTCTAAATTGACTGTTGTAGGTGTAATTAGATATTTTATATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGCACTCTAAATTGACTGTTGTAGGTGTAATTAGATATTTTATATA  750

seq1  TATACATATATACATATATACATATATATATATATATATATAGTTATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATATATACATATATACATATATATATATATATATATAGTTATTTT  800

seq1  CTGATACTCTGATAGTTGCTTTACCTATAATCATTTTGTTCTTAAGATAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATACTCTGATAGTTGCTTTACCTATAATCATTTTGTTCTTAAGATAG  850

seq1  ATTGGGAACAATAAATAATTCAACACATATATTATAAGTGAACTTTTTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGAACAATAAATAATTCAACACATATATTATAAGTGAACTTTTTAG  900

seq1  CAACTATGCCAGCATCTTAGAGTAAACCTTTGTTCAAAT-AAATATTTTT  949
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CAACTATGCCAGCATCTTAGAGTAAACCTTTGTTCAAATAAAATATTTTT  950

seq1  TTCACATGAATAAAAATAACTTTGCCAAATTAACCAACTTAAATTTTTAT  999
      ||||||||||  ||||||||||||||||||||||||||||||| ||||||
seq2  TTCACATGAAATAAAATAACTTTGCCAAATTAACCAACTTAAA-TTTTAT  999

seq1  TCTGTATTTTGAAAAGCAAAAATTAA-TCTC-TAGTATAACTTACATGTT  1047
      |||||||||||||||||||||||||| |||| ||||||||||||||||||
seq2  TCTGTATTTTGAAAAGCAAAAATTAATTCTCTTAGTATAACTTACATGTT  1049

seq1  TTAACAGT-AATATA-CCAG-CATGTTCTTAAAAATACATTACTG--AGA  1092
      | |||||| |||||| |||| |||||   ||||||||||||||||  |||
seq2  TAAACAGTAAATATACCCAGCCATGT--CTAAAAATACATTACTGGAAGA  1097

seq1  --CTGG--ATCTTACAAGAG-ACTCAGTGTTCTCTAAAGAATGATTTTCC  1137
        ||||  ||||||| |||| |||||| |||| || ||||||||  ||||
seq2  ACCTGGGAATCTTAC-AGAGAACTCAGCGTTCCCTTAAGAATGA--TTCC  1144

seq1  TCTTACCTGTA-TGTAGG--ATGCAT-GCATG  1165
      ||||||||||| |||| |  |||||| |||||
seq2  TCTTACCTGTATTGTAAGCAATGCATGGCATG  1176