BAC Information

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BAC

Clone NameB6Ng01-332C19
Chromosome16 (Build37)
Map Location 60,800,996 - 60,801,546
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha6, LOC100043804, EG668168, LOC668170
Downstream geneLOC100043524, LOC668183
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332C19.bB6Ng01-332C19.g
ACCGA118352GA118353
length1,259995
definitionB6Ng01-332C19.b B6Ng01-332C19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagacccagaaatgaacccacacacctatggttacttgatcttt
gacaagggagcaaaaaccatccagtggaaaaaagacagcattttcaacaa
atggtgctggtacaactggctgttatcatgtagaagaatgctaattgata
cattcctttctccttgtactaaggtcaaatctaagtggattaaggaactc
cacataaagccagagacactgaaacttatagaggagaaagtggggaaaag
cctcaaagatatgggtacaggagaaaaattcctgaatagaacagcagtgg
cttgagctgtaagattgagaattgacaaatagcatctcctgaaactgcaa
agcttctgcaacgcaaaagacaccatcaataagacaaaaaggccaccaat
agattgggaaagggtctttacctatcctcaatcagataggggaataatat
ccaatatatataaagaactcaagaaggtcaactccagaaaatcaaataac
cccattaaaaatggggctcagagctgaacaaagaattctcagctgaggaa
taccaaatgactgagaaacacctgaaaaaatgtttaacatccttaatcat
cagagaaatgcaaatcaaaaccaccctgagattccacctcacaccagtca
gaatggctaagatcaaaaattcaggtgacagcacatgctgatgaggatgt
ggagaaagaggaacactcctccaattttggtgggattgcaagcttgtaca
accactttggaaatcagtctggcggtttctcagaaaattggacattgtac
tactggaggatcccataatacctctcctgggcatatatccagaagatgcc
ctaactggtaataaggacacatgttccactatgttcatagcagccttatt
tataatagccagaagctggaaagaacccagatgccccttaacagaggaat
ggatacagaaaatgtggtacatttacacaatggagtactactcagctatt
aaaaaaatgaatttatgaaattcctaggcaaatggatagacctggagggc
atcatcctgagtgagtacccaatcaccaaggatcctcacacaatatgtac
tcaccgataagtgatattagccagaaacttagaatacgccaacatataag
ataacaatgctaaatgcatgaactggaagagaatggagatcaggtgtgac
cttgttccttcctgattgaacaatcacctcatgggaggagattaccgaag
acgccaagt

gaattcctctctgcttgtgcctttttaattatgtacttaatcttcaaagc
agtagctcatggacaaaatatagttttgtaaaatggtaagttgtgtacat
taaaattaaattgtagatgctaagatgttgggctccatttatattttctc
acattcatctgtttgtagtccatttgagttgatgtaacatgtaaatgtgc
tttattttttgtaatgctgttctgtggtaaatctcttatatttaaaatat
tcattattcgaattttttttttacaatgagcctttactataattaccctg
tcctccagtgtctcccaaatccactgccaactcatccctaccttctgaac
tttatgtcttctttcagttttagtcatgatatagttcagtttgtgctgcc
cacatatttatggatttttgctttccactagagaatagttaactttccag
tgtcaacaatcttgacgtaaactgactacccttctatcaatggatatcaa
ttgccaatagctcttcagctaagggtgatcttcaggtacacttccccttt
ttatgttaggatttgttctagcttgaatgtacgctgggtttgtgtgcact
gccttcagcactgtaagtccacatatgctgctcttttgtctggagaagat
ggttttgtctttgtttatcaattctgcattttaatggcttccatcattcc
ttcgtaaggagaagtcttgggaagagtgaataaagcatagctgttctatt
tatggctcagcatcccacaagctcttgttatttataccatggccgattgt
gggtttcagcttaatcaccatctactgcaaatagaagcttctctgttgag
acataagaggtgtgatatcatatgaatatcacaataaatgagcagaaatc
agatttatataatgttatttcaaataatcgaggtagttaataccctaggg
cccatgacccatctagacatgagttttagtttcaaatgttagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_60800996_60801546
seq2: B6Ng01-332C19.g_68_618 (reverse)

seq1  AAAAGGGGAAGTGTACCTGAAGATCACCCTTAGCTGAAGAGCTATTGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGGAAGTGTACCTGAAGATCACCCTTAGCTGAAGAGCTATTGGCA  50

seq1  ATTGATATCCATTGATAGAAGGGTAGTCAGTTTACGTCAAGATTGTTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATATCCATTGATAGAAGGGTAGTCAGTTTACGTCAAGATTGTTGAC  100

seq1  ACTGGAAAGTTAACTATTCTCTAGTGGAAAGCAAAAATCCATAAATATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAAGTTAACTATTCTCTAGTGGAAAGCAAAAATCCATAAATATGT  150

seq1  GGGCAGCACAAACTGAACTATATCATGACTAAAACTGAAAGAAGACATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGCACAAACTGAACTATATCATGACTAAAACTGAAAGAAGACATAA  200

seq1  AGTTCAGAAGGTAGGGATGAGTTGGCAGTGGATTTGGGAGACACTGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAGAAGGTAGGGATGAGTTGGCAGTGGATTTGGGAGACACTGGAGG  250

seq1  ACAGGGTAATTATAGTAAAGGCTCATTGTAAAAAAAAAATTCGAATAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTAATTATAGTAAAGGCTCATTGTAAAAAAAAAATTCGAATAATG  300

seq1  AATATTTTAAATATAAGAGATTTACCACAGAACAGCATTACAAAAAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTAAATATAAGAGATTTACCACAGAACAGCATTACAAAAAATAA  350

seq1  AGCACATTTACATGTTACATCAACTCAAATGGACTACAAACAGATGAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACATTTACATGTTACATCAACTCAAATGGACTACAAACAGATGAATG  400

seq1  TGAGAAAATATAAATGGAGCCCAACATCTTAGCATCTACAATTTAATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAATATAAATGGAGCCCAACATCTTAGCATCTACAATTTAATTTT  450

seq1  AATGTACACAACTTACCATTTTACAAAACTATATTTTGTCCATGAGCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACACAACTTACCATTTTACAAAACTATATTTTGTCCATGAGCTAC  500

seq1  TGCTTTGAAGATTAAGTACATAATTAAAAAGGCACAAGCAGAGAGGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGAAGATTAAGTACATAATTAAAAAGGCACAAGCAGAGAGGAATT  550

seq1  C  551
      |
seq2  C  551


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