BAC Information

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BAC

Clone NameB6Ng01-332E02
Chromosome16 (Build37)
Map Location 16,157,321 - 16,158,036
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665653, LOC385748, LOC100042743, LOC547302, EG632352, Ube2v2, LOC665682, Mcm4, Prkdc, 2410018G20Rik, Cebpd, 2310008H04Rik, LOC100043266
Downstream geneLOC224010, D16Ertd727e, Pkp2, EG433003, Yars2, Dnm1l, LOC665743, Fgd4, Olfr19, 4933404G15Rik, Spag6, EG665562, EG436405, Vpreb1, Top3b, Ppm1f, LOC100042783, EG623519, Mapk1, Ypel1, Ppil2, 2610318N02Rik, Sdf2l1, LOC623568, Ccdc116, 1810015A11Rik, Ube2l3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332E02.bB6Ng01-332E02.g
ACCGA118405GA118406
length1,158800
definitionB6Ng01-332E02.b B6Ng01-332E02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgcacatgcaactattcaattctaccagcaccatttgttccat
ttgttgaagattctcttctctctaatgtgtattcttggcttctttgtcaa
aactcaggtgtccataagcatgtgaaattatgtttgtgtgttcaatttga
ttccattgatcaatgggtctgtttttatgtcagaactaagctgcttttat
tttttgacttgaaaccttagatagtgttatgttcagcaattactttaatt
atgcagtagtgtttttacctatcctgagtttttatgttttcacatgaagc
aaaaaatagcttgtctatcaaataaaattaaaaaaaaaaaagaaacattg
cttcaatttctgttaagaattatgctggcattttgatatggacttttgaa
aataaattatgtttagcaggatggccatgttcataatattaatttacaaa
ttcattagcacgggagatttttcaattttctgaggtctttacccatttct
ttctttaatgcaaagagtttttattattcaagtctttcacttgctcggtt
atagttacctaaggtcggtctctctctctctctctctctctctctctctc
tctctctctctctctctctctgtgtctctgggtgccatccaccccccccc
ccacacacacacgctttcttacatgcacatttgtgaggggcatgggtggg
agggtgctctctcccgatctatttcacagactacgctgtcactttgaata
tacaagacacctaaaatttttctgaagtaatttttgcctccctgctgatt
ggctgaaagtgtctaccagcagataaaaaccccctctgatggaattttgg
ggggggtgtgtgcttaaaaacataaaatatgtgcataagaacactttgat
tttctttatttcccatttagtatccctaatagatatgttgtcgggtgtgg
gggtgcccgaaaatcggtacacctccaccagtacgtggtccaatatataa
tggacttggaggggctataaaaaaaaaataagcaatactaacgcttagtt
ttgttttgtcgtacgttctatacatatctctgagtgacaggaagtaatac
cacctcttgggttatgagggaagaggaaagtttagggccctagtctatct
ttttttaa
gaattcctgtcctcactgcttttgatgatgaaatgttaaatgggactgca
ggtaaatatactgtttccttgccaagttgattttgttcagcgtgttttat
catatcaatagtaatcctaactaagaaaatgtgcatatactaatatgtgt
ggtatatgtgtatattttatgtgtacgtatatgtgtacacaagtatatat
ttctgtgtatgtacataagtattttatatttgtgtgggcttcttgtatat
ttttgcttgtgtgtgtatttgtacatttgtattttgtacatgaaactctt
gtgtgtgttcatgcacatatttatctatgcacatgtgcttattatttgtg
tatgtacatgtatatgtttatctgtatatgcaatgtaatttctgtgacca
tcatggccagcagtgtaacagtctgcaggataggaaatagtagaataaag
gtaaaaccaaagttgagaggtagaatacaagggggtggaaatgcttaggc
aaggaggcatttgggaagataggggaaatatgaaggtaacacatgagaga
ggaacatatgaaaaattcatgtggaaatttgctcttgaagcacaattaaa
caatataattggaggggatagtagtatacacttatatgaaagatgttgtg
ggaaaatactgaggatgaaacatttaagtggtggtggggatatagatgag
ggacatagactaggggataagagctggactgacttcggaccaattttctt
taatgaatatagatgcaaaatcctcattaaaattctcgctaaccgaatcc

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_16157321_16158036
seq2: B6Ng01-332E02.g_149_863 (reverse)

seq1  GGATTCGGTTAGCGAGAATTTTATTGAGGATTTTTGCATCTATATTCA-T  49
      ||||||||||||||||||||||| |||||| ||||||||||||||||| |
seq2  GGATTCGGTTAGCGAGAATTTTAATGAGGA-TTTTGCATCTATATTCATT  49

seq1  AAGGGAAATTGGTCTGAAGTTCAGTCCAGCTCTTATCCCCTAGTCTATGT  99
      || | ||||||||| |||| ||||||||||||||||||||||||||||||
seq2  AAAGAAAATTGGTCCGAAG-TCAGTCCAGCTCTTATCCCCTAGTCTATGT  98

seq1  CCCTCATCTATATCCCCACCACCACTTAAATGTTTCATCCTCAGTATTTT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCATCTATATCCCCACCACCACTTAAATGTTTCATCCTCAGTATTTT  148

seq1  CCCACAACATCTTTCATATAAGTGTATACTACTATCCCCTCCAATTATAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAACATCTTTCATATAAGTGTATACTACTATCCCCTCCAATTATAT  198

seq1  TGTTTAATTGTGCTTCAAGAGCAAATTTCCACATGAATTTTTCATATGTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAATTGTGCTTCAAGAGCAAATTTCCACATGAATTTTTCATATGTT  248

seq1  CCTCTCTCATGTGTTACCTTCATATTTCCCCTATCTTCCCAAATGCCTCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTCATGTGTTACCTTCATATTTCCCCTATCTTCCCAAATGCCTCC  298

seq1  TTGCCTAAGCATTTCCACCCCCTTGTATTCTACCTCTCAACTTTGGTTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTAAGCATTTCCACCCCCTTGTATTCTACCTCTCAACTTTGGTTTT  348

seq1  ACCTTTATTCTACTATTTCCTATCCTGCAGACTGTTACACTGCTGGCCAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTATTCTACTATTTCCTATCCTGCAGACTGTTACACTGCTGGCCAT  398

seq1  GATGGTCACAGAAATTACATTGCATATACAGATAAACATATACATGTACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTCACAGAAATTACATTGCATATACAGATAAACATATACATGTACA  448

seq1  TACACAAATAATAAGCACATGTGCATAGATAAATATGTGCATGAACACAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAATAATAAGCACATGTGCATAGATAAATATGTGCATGAACACAC  498

seq1  ACAAGAGTTTCATGTACAAAATACAAATGTACAAATACACACACAAGCAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGTTTCATGTACAAAATACAAATGTACAAATACACACACAAGCAA  548

seq1  AAATATACAAGAAGCCCACACAAATATAAAATACTTATGTACATACACAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATACAAGAAGCCCACACAAATATAAAATACTTATGTACATACACAG  598

seq1  AAATATATACTTGTGTACACATATACGTACACATAAAATATACACATATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATACTTGTGTACACATATACGTACACATAAAATATACACATATA  648

seq1  CCACACATATTAGTATATGCACATTTTCTTAGTTAGGATTACTATTGATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACATATTAGTATATGCACATTTTCTTAGTTAGGATTACTATTGATA  698

seq1  TGATAAAACACGCTGAA  716
      |||||||||||||||||
seq2  TGATAAAACACGCTGAA  715