BAC Information

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BAC

Clone NameB6Ng01-334J20
Chromosome16 (Build37)
Map Location 56,913,906 - 56,914,998
singlet/doubletsinglet
Overlap genenone
Upstream geneLrriq2, EG667966, LOC629242, Rpl24, Zbtb11, Pcnp, Rg9mtd1, Senp7, Impg2, LOC672835, Abi3bp, Tfg, Gpr128, Tmem45a, LOC668026
Downstream geneLOC668036, 2310005G13Rik, Tomm70a, Nit2, Tbc1d23, Tmem30c, 2610528E23Rik, 4631422O05Rik, Col8a1, LOC435480, LOC629342
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334J20.bB6Ng01-334J20.g
ACCGA120077GA120078
length1,097315
definitionB6Ng01-334J20.b B6Ng01-334J20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgccacaccagcaagagagctaataaatgctatgtccttttagg
tctgagtttcagagagccaatacaaggcctcccttcagtgtgttaaggat
tgctttagataatgtgttaaatcattcagggtaatacttgtcatgttaat
tggtagttttcattaagtgatggctattatacagcttaattacctggaat
aaggaagtaaggttagagacaaggacttttgtttaggatgatgtgggagg
ttaataaggaaaaggtgatgacatataagtgactcattagaaaccaaatt
ttataatatcaggaattcctttattttattcaaatactttttcttcttac
cacagaaagacataaacattgtacactcaagatgccaggggcagttggag
caaaacacaaatcatgttgaaaagcagccattctaactgctcacttttgt
ctcaacatctgctaataccctttccagatgtcattctgcaggaagttcta
ggtctctgaacaaccagtgacgtctgtcattggcaatgttgaaatgaagt
gttactcaggccccctttcaatcagaggatccatgggtccgtctccatcc
ttcactgagctcctcctgtcctccaccctcttataggatctcatggtagt
ctctaggcaatgtctttcatctctctccttcttccccttgggtccctgga
agaatatcagaaaagggtaaaatgcacaagatgttgaccaggtctcacat
ttgtcccaacaactggaaaggaagaaagctctgaatttgtagcatacatc
cacgtcttactttctagcacataaattgacatcaccccaatttaacatct
cagtaaaggtctcaaacataaaaggagcatttgctatagtgtaaagtaag
agctacatgagcatttggtgtttggaaggacatccaaccaaatcatcatt
ctctaatagattggctggtctgagagcggtggggccgtttacagtacttc
actgattgtatttgacacacactgtttgttctaggatcagatattacagc
agttaaattagattctacgttctggacacctccagccttatatggag
atttacttttttggtgtcaacacaaactaaagaggattctgttctgtgtt
ttccaatgagaaagacacagaggagttccaaaaaggcaggtgagttattg
gcatttaaaggttgtggaacaggataaagtcagttttctttaaggacatg
atccctgccctagtagatcaaacatactctggggcaggacccacacccag
gagatttgggcaacagacactgggcttaataaactaaagtagaaaagaag
aagaagaaagaatgtacaggagaaggagaagaagaaggaggagaaggagg
aggaaggggaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_56913906_56914998
seq2: B6Ng01-334J20.b_49_1145

seq1  GAATTCTGCCACACCAGCAAGAGAGCTAATAAATGCTATGTCCTTTTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCCACACCAGCAAGAGAGCTAATAAATGCTATGTCCTTTTAGG  50

seq1  TCTGAGTTTCAGAGAGCCAATACAAGGCCTCCCTTCAGTGTGTTAAGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTTTCAGAGAGCCAATACAAGGCCTCCCTTCAGTGTGTTAAGGAT  100

seq1  TGCTTTAGATAATGTGTTAAATCATTCAGGGTAATACTTGTCATGTTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTAGATAATGTGTTAAATCATTCAGGGTAATACTTGTCATGTTAAT  150

seq1  TGGTAGTTTTCATTAAGTGATGGCTATTATACAGCTTAATTACCTGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGTTTTCATTAAGTGATGGCTATTATACAGCTTAATTACCTGGAAT  200

seq1  AAGGAAGTAAGGTTAGAGACAAGGACTTTTGTTTAGGATGATGTGGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGTAAGGTTAGAGACAAGGACTTTTGTTTAGGATGATGTGGGAGG  250

seq1  TTAATAAGGAAAAGGTGATGACATATAAGTGACTCATTAGAAACCAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAGGAAAAGGTGATGACATATAAGTGACTCATTAGAAACCAAATT  300

seq1  TTATAATATCAGGAATTCCTTTATTTTATTCAAATACTTTTTCTTCTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATATCAGGAATTCCTTTATTTTATTCAAATACTTTTTCTTCTTAC  350

seq1  CACAGAAAGACATAAACATTGTACACTCAAGATGCCAGGGGCAGTTGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAAGACATAAACATTGTACACTCAAGATGCCAGGGGCAGTTGGAG  400

seq1  CAAAACACAAATCATGTTGAAAAGCAGCCATTCTAACTGCTCACTTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACACAAATCATGTTGAAAAGCAGCCATTCTAACTGCTCACTTTTGT  450

seq1  CTCAACATCTGCTAATACCCTTTCCAGATGTCATTCTGCAGGAAGTTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACATCTGCTAATACCCTTTCCAGATGTCATTCTGCAGGAAGTTCTA  500

seq1  GGTCTCTGAACAACCAGTGACGTCTGTCATTGGCAATGTTGAAATGAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCTGAACAACCAGTGACGTCTGTCATTGGCAATGTTGAAATGAAGT  550

seq1  GTTACTCAGGCCCCCTTTCAATCAGAGGATCCATGGGTCCGTCTCCATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTCAGGCCCCCTTTCAATCAGAGGATCCATGGGTCCGTCTCCATCC  600

seq1  TTCACTGAGCTCCTCCTGTCCTCCACCCTCTTATAGGATCTCATGGTAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGAGCTCCTCCTGTCCTCCACCCTCTTATAGGATCTCATGGTAGT  650

seq1  CTCTAGGCAATGTCTTTCATCTCTCTCCTTCTTCCCCTTGGGTCCCTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGCAATGTCTTTCATCTCTCTCCTTCTTCCCCTTGGGTCCCTGGA  700

seq1  AGAATATCAGAAAAGGGTAAAATGCACAAGATGTTGACCAGGTCTCACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATCAGAAAAGGGTAAAATGCACAAGATGTTGACCAGGTCTCACAT  750

seq1  TTGTCCCAACAACTGGAAAGGAAGAAAGCTCTGAATTTGTAGCATACATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCCAACAACTGGAAAGGAAGAAAGCTCTGAATTTGTAGCATACATC  800

seq1  CACGTCTTACTTTCTAGCACATAAATTGACATCACCCCAATTTAACATCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTCTTACTTTCTAGCACATAAATTGACATCACCCCAATTTAACATCT  850

seq1  CAGTAAAGGTCTCAAACATAAAAAGGAGCATTTGCTATAGTGTAAAGTAA  900
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CAGTAAAGGTCTCAAACAT-AAAAGGAGCATTTGCTATAGTGTAAAGTAA  899

seq1  GAGCTACATGAGCAATTTGGTGTTTTGGAAGGACATCCAACCAAATCATC  950
      ||||||||||||| |||||||| |||||||||||||||||||||||||||
seq2  GAGCTACATGAGC-ATTTGGTG-TTTGGAAGGACATCCAACCAAATCATC  947

seq1  ATTCTCTAATAGATTGGCTGGTCTGAGAGCGGTGGGGCCGTTTACAGTAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTAATAGATTGGCTGGTCTGAGAGCGGTGGGGCCGTTTACAGTAC  997

seq1  TTCACTGA-TGTATTGAACACACACTG-TTGTTCTAGGATCAGAATATAC  1048
      |||||||| ||||||  |||||||||| ||||||||||||||||   |||
seq2  TTCACTGATTGTATTTGACACACACTGTTTGTTCTAGGATCAGATATTAC  1047

seq1  AGCAGT--AAATAGATTCTACGTTCTGGACA-CTCCAGC--TATATGGAG  1093
      ||||||  || |||||||||||||||||||| |||||||  |||||||||
seq2  AGCAGTTAAATTAGATTCTACGTTCTGGACACCTCCAGCCTTATATGGAG  1097