BAC Information

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BAC

Clone NameB6Ng01-334N17
Chromosome16 (Build37)
Map Location 53,936,812 - 53,937,788
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667895
Downstream geneLOC433027, LOC100043442, LOC100043449, LOC667927
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-334N17.bB6Ng01-334N17.g
ACCGA120257GA120258
length984326
definitionB6Ng01-334N17.b B6Ng01-334N17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcttttacttttatttatttttttaatttatttattttttacg
ctccatattccattctctgcaccaccatccaccctctgactgctccacaa
ccgacacatcttccccatccctctgtctccacttgatgccccccaccacc
tgacctctaaactccctgggccctccagtctcttgaaggttaagtgcatc
atctctaactgaacatagacccggaagtcctctactgtatgtgtgttggg
ggctcatgtcagttggtgtatgctgtctgtttggtggtccagtgcttgag
agatcttaagggtccagattaattgacactgttgggcctcctactgggtc
ggcttctcctcagcttctttcagcctttccggaattcaacaacaggggtc
agcggcttctgtcctgggttggatgcaaatatctgcatctgactctttca
gctgcttgttgggtttttcagagggcagtcatgatagatccctttttttg
tgagggctctattgcctaagtaatagtgtcagacctactcattaggagat
ttttaagtctagaaagctatcttatacaccatgttggtgtatgggagtaa
tgtatactaggagagttgtgagtttgtctttaccgcagcagaaatgaatt
acgggctatgcttattgtgaaaggttcgtttttttacatggagttctatg
ttatacaggataatgacttttcatcttacacctcaacagattatcaagac
cgaaggatttagacttatttataaattatcttcatttctttcccacctgc
cctctgcttcgtcatttcccctcaactctatcttctatttatctttctcc
tcgtcattatttaatattttcctatcctcgtaaattgtttcgaaatggag
gatctgaagattaatcaaaagatgtgcagccaggcttgcccattctagaa
attacagagatagattgttaagaatctcctaatg

ccggccaatgtaccaaatgaaagacccccgaagggagaccctcactcaga
ccactcaagtcccgggacagccgcgtacccaagaagacactgagaccata
cataaaatgtagaaggcaagatttaataaagtagcaacatgaaagcacac
agaccagagctctggggtcgaaataaagcagcaacatgaaagcacacaga
ccagagctctggggtcgaaactcatacaccttagcacagggtagaggagt
ctcgatgacgactcaaatttttcacaagcttttaaaggaaaaaaccacaa
actgggagggggaatggggagggaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_53936812_53937788
seq2: B6Ng01-334N17.b_47_1030

seq1  GAATTCTTCTTTTACTTTTATTTATTTTTTTAATTTATTTATTTTTTACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTTTACTTTTATTTATTTTTTTAATTTATTTATTTTTTACG  50

seq1  CTCCATATTCCATTCTCTGCACCACCATCCACCCTCTGACTGCTCCACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATATTCCATTCTCTGCACCACCATCCACCCTCTGACTGCTCCACAA  100

seq1  CCGACACATCTTCCCCATCCCTCTGTCTCCACTTGATGCCCCCCACCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACACATCTTCCCCATCCCTCTGTCTCCACTTGATGCCCCCCACCACC  150

seq1  TGACCTCTAAACTCCCTGGGCCCTCCAGTCTCTTGAAGGTTAAGTGCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCTAAACTCCCTGGGCCCTCCAGTCTCTTGAAGGTTAAGTGCATC  200

seq1  ATCTCTAACTGAACATAGACCCGGAAGTCCTCTACTGTATGTGTGTTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTAACTGAACATAGACCCGGAAGTCCTCTACTGTATGTGTGTTGGG  250

seq1  GGCTCATGTCAGTTGGTGTATGCTGTCTGTTTGGTGGTCCAGTGCTTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCATGTCAGTTGGTGTATGCTGTCTGTTTGGTGGTCCAGTGCTTGAG  300

seq1  AGATCTTAAGGGTCCAGATTAATTGACACTGTTGGGCCTCCTACTGGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTAAGGGTCCAGATTAATTGACACTGTTGGGCCTCCTACTGGGTC  350

seq1  GGCTTCTCCTCAGCTTCTTTCAGCCTTTCCGGAATTCAACAACAGGGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTCCTCAGCTTCTTTCAGCCTTTCCGGAATTCAACAACAGGGGTC  400

seq1  AGCGGCTTCTGTCCTGGGTTGGATGCAAATATCTGCATCTGACTCTTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGCTTCTGTCCTGGGTTGGATGCAAATATCTGCATCTGACTCTTTCA  450

seq1  GCTGCTTGTTGGGTTTTTCAGAGGGCAGTCATGATAGATCCCTTTTTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTGTTGGGTTTTTCAGAGGGCAGTCATGATAGATCCCTTTTTTTG  500

seq1  TGAGGGCTCTATTGCCTAAGTAATAGTGTCAGACCTACTCATTAGGAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGCTCTATTGCCTAAGTAATAGTGTCAGACCTACTCATTAGGAGAT  550

seq1  TTTTAAGTCTAGAAAGCTATCTTATACACCATGTTGGTGTATGGGAGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGTCTAGAAAGCTATCTTATACACCATGTTGGTGTATGGGAGTAA  600

seq1  TGTATACTAGGAGAGTTGTGAGTTTGTCTTTACCGCAGCAGAAATGAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACTAGGAGAGTTGTGAGTTTGTCTTTACCGCAGCAGAAATGAATT  650

seq1  AGGGGCTATGCTTATTGTGAAAGGTTCGTTTTTTTACATGGAGTTCTATG  700
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGCTATGCTTATTGTGAAAGGTTCGTTTTTTTACATGGAGTTCTATG  700

seq1  TTATACAGGATAATGACTTTTCATCTTACACCTCAACAGATTATCAAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACAGGATAATGACTTTTCATCTTACACCTCAACAGATTATCAAGAC  750

seq1  CGAAGGATTTAGACTTATTTAT-AATTATC-TCATTTCTTTCCCACCTGC  798
      |||||||||||||||||||||| ||||||| |||||||||||||||||||
seq2  CGAAGGATTTAGACTTATTTATAAATTATCTTCATTTCTTTCCCACCTGC  800

seq1  CCTCTGCTCCGTCATTTCCCCTCAACTCTATCTTCTA-TTATCTTTCTCC  847
      |||||||| |||||||||||||||||||||||||||| ||||||||||||
seq2  CCTCTGCTTCGTCATTTCCCCTCAACTCTATCTTCTATTTATCTTTCTCC  850

seq1  TCGTCATTATTT-ATATTTT-CTATCTTCGTTAAATGTTTCGAAAT-GAG  894
      |||||||||||| ||||||| ||||| |||| || ||||||||||| |||
seq2  TCGTCATTATTTAATATTTTCCTATCCTCGTAAATTGTTTCGAAATGGAG  900

seq1  GATCTGAAGATTAATCAAAAGATGTGCAGCCAGGCTTGCCCATTCTAGAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGAAGATTAATCAAAAGATGTGCAGCCAGGCTTGCCCATTCTAGAA  950

seq1  ATTACAGAGATAGATTGTTAAGAATCT-CTAATG  977
      ||||||||||||||||||||||||||| ||||||
seq2  ATTACAGAGATAGATTGTTAAGAATCTCCTAATG  984


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