BAC Information

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BAC

Clone NameB6Ng01-339F04
Chromosome16 (Build37)
Map Location 83,313,873 - 83,446,437
singlet/doubletdoublet
Overlap geneEG545172
Upstream geneEG665260
Downstream geneLOC100039572, EG621729, LOC640489, LOC665664
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-339F04.bB6Ng01-339F04.g
ACCGA123348GA123349
length344682
definitionB6Ng01-339F04.b B6Ng01-339F04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,446,094 - 83,446,437)(83,313,873 - 83,314,421)
sequence
aacacaatattttgaaaccagacctttatttttggtctctacatttattt
gtgtttacataaattggctgaaaatacagttcatgataatgttattataa
attctaatggataaaatttagaaatgagagtcataaaaggtttaaagctt
attgtttttaatctaaaatctttggcaaacatcacaaaattgagataagt
aagctttcagttttttataaaaaagatggcctagtcggccatcactggaa
agagaggcccattggacttgcaaactttatatgccccagtacaggggaac
accagggccaaaaagggggagtgggtgggcaggggagtgggggt

gaattcaccctaatcaagaaagcatctgtccaatagatgtagactgttta
aaacaaaaacaaaaacaaaagcaaacaaacaaaaacagctacatccaatc
aatttacagagttgttgagaggcaagtcccagtgaatacagaagcaactc
cttcctactgctaaagctcagaggcagctattctaaataataataataat
aataataataataataataataataataatagccatggagaagaaaggaa
gttctccatgagaactgtcccctaatgtcacaaactacaacccaatatat
cagcaaaacacctacccaaacacaaaccgaccaaagtgtccaccaacgga
cactccaagcaacactggaaggagttcgctagatacgatctccccacaaa
gaactacaagcaatccagtaaagccgggactgggagacattgtctgcctc
agggaaaaacacattcactcattgtccaatgctaaatcaacccagaaaac
atgcaacacaaatgtaacaccataggggttgagtaggttctatttaggta
cataggttcatgcaacaattgatttaaaaaaatgaggtaatatatttaaa
gaagatcagggaggggtatatgggatggtttgaagggaaggaaagagaag
aaaatgttgtaaataatatactattatcaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_83446094_83446437
seq2: B6Ng01-339F04.b_53_396 (reverse)

seq1  ACCCCCACTCCCCTGCCCACCCACTCCCCCTTTTTGGCCCTGGTGTTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCACTCCCCTGCCCACCCACTCCCCCTTTTTGGCCCTGGTGTTCCC  50

seq1  CTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAG  100

seq1  TGATGGCCGACTAGGCCATCTTTTTTATAAAAAACTGAAAGCTTACTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGCCGACTAGGCCATCTTTTTTATAAAAAACTGAAAGCTTACTTAT  150

seq1  CTCAATTTTGTGATGTTTGCCAAAGATTTTAGATTAAAAACAATAAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATTTTGTGATGTTTGCCAAAGATTTTAGATTAAAAACAATAAGCTT  200

seq1  TAAACCTTTTATGACTCTCATTTCTAAATTTTATCCATTAGAATTTATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTTTTATGACTCTCATTTCTAAATTTTATCCATTAGAATTTATAA  250

seq1  TAACATTATCATGAACTGTATTTTCAGCCAATTTATGTAAACACAAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTATCATGAACTGTATTTTCAGCCAATTTATGTAAACACAAATAA  300

seq1  ATGTAGAGACCAAAAATAAAGGTCTGGTTTCAAAATATTGTGTT  344
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGAGACCAAAAATAAAGGTCTGGTTTCAAAATATTGTGTT  344


seq1: chr16_83313873_83314421
seq2: B6Ng01-339F04.g_68_616

seq1  GAATTCACCCTAATCAAGAAAGCATCTGTCCAATAGATGTAGACTGTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCTAATCAAGAAAGCATCTGTCCAATAGATGTAGACTGTTTA  50

seq1  AAACAAAAACAAAAACAAAAGCAAACAAACAAAAACAGCTACATCCAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAACAAAAACAAAAGCAAACAAACAAAAACAGCTACATCCAATC  100

seq1  AATTTACAGAGTTGTTGAGAGGCAAGTCCCAGTGAATACAGAAGCAACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACAGAGTTGTTGAGAGGCAAGTCCCAGTGAATACAGAAGCAACTC  150

seq1  CTTCCTACTGCTAAAGCTCAGAGGCAGCTATTCTAAATAATAATAATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTACTGCTAAAGCTCAGAGGCAGCTATTCTAAATAATAATAATAAT  200

seq1  AATAATAATAATAATAATAATAATAATAATAGCCATGGAGAAGAAAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAATAATAATAATAATAATAATAATAGCCATGGAGAAGAAAGGAA  250

seq1  GTTCTCCATGAGAACTGTCCCCTAATGTCACAAACTACAACCCAATATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCCATGAGAACTGTCCCCTAATGTCACAAACTACAACCCAATATAT  300

seq1  CAGCAAAACACCTACCCAAACACAAACCGACCAAAGTGTCCACCAACGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAAACACCTACCCAAACACAAACCGACCAAAGTGTCCACCAACGGA  350

seq1  CACTCCAAGCAACACTGGAAGGAGTTCGCTAGATACGATCTCCCCACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCAAGCAACACTGGAAGGAGTTCGCTAGATACGATCTCCCCACAAA  400

seq1  GAACTACAAGCAATCCAGTAAAGCCGGGACTGGGAGACATTGTCTGCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTACAAGCAATCCAGTAAAGCCGGGACTGGGAGACATTGTCTGCCTC  450

seq1  AGGGAAAAACACATTCACTCATTGTCCAATGCTAAATCAACCCAGAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAAACACATTCACTCATTGTCCAATGCTAAATCAACCCAGAAAAC  500

seq1  ATGCAACACAAATGTAACACCATAGGGGTTGAGTAGGTTCTATTTAGGT  549
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAACACAAATGTAACACCATAGGGGTTGAGTAGGTTCTATTTAGGT  549


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