BAC Information

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BAC

Clone NameB6Ng01-341P13
Chromosome16 (Build37)
Map Location 77,450,336 - 77,451,459
singlet/doubletsinglet
Overlap genenone
Upstream gene1700063K16Rik, LOC665120, Usp25
Downstream gene2810055G20Rik, LOC435483, LOC100039561, Cxadr, Btg3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341P13.bB6Ng01-341P13.g
ACCGA125198GA125199
length1,120268
definitionB6Ng01-341P13.b B6Ng01-341P13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccatacttaacctaatataatatcatgttattttacctccagg
aggcttcaaatcgtgttccaagttatcggccaaactgtgttccaagaatt
aggaccacatgaaataatttactataagttagagctttcctgtaaagaaa
gtcacacatctcaatgctagtataataaacacttttagaatgtatgctat
ggatgaattgcaatgagtcttatcccccttgtttttagattatttgtgga
aataatgtaatttcaagtagttaggaaaatttgtataacttggtgtggag
aaaatatcagcagttttggtgctgtcctcgatgtggatgtaggtagatgc
actcctagcactataactttccagctttagtgctaaacccctttaatttc
agttcttaacactcaaccataatccaaaaacattaagtagactattctaa
aatttaaacagcatattgttttataacactaagcagggtgattttcatga
catcttgtttactgccttgggttattaagcatcccttcatccagtgtatc
caagctgtatgtactaattttagatggtacgtagtaaccatctgggttat
cagactgaatttcactgtatcccactgtttaagtgggtttatttcggtta
atatgtaacttaaagtacaagtgttgtcacattgacaattcagatataca
aagggaagatgtaaaaggcttcctttaaacaagaaagagaatggtctcag
tttggtaaagaagaaaactaatctgtgttacgattgctgacatctctgat
gagaacaaatggcttaaatctttaatgtcaagagtctgttccatgctggg
tcataatcccactgataagggaggactatggttatctgacttgcctgatc
attttttatttccagtgtaatatggagtaccagatgaccagacttaagac
atcaatagattccaaacagcagttataaagcactgactctataatgcagc
agctcatttctctgacttttgcagatttcactgttcttatagcacctgtg
ctgcctttatgccaaatgggatatcagcgaactcaattttcttatcttaa
cctcatgtggaggtcattca

tttatatattttggaaattagacctccgtccaacgtagggttagttaaga
cctttttcacccctaatgttagtgtcctttgactttcaaaggcttttcag
tttcatgaggtctcatttattaattctttgcctgagccatttgtgttctg
ttcaggaagtttctcctgtaccaatgacaagttcaaggttatccaccact
ttctgttctattagatttagtctatctggttttatgctgaggtctttgat
ccatttggacttgaatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_77450336_77451459
seq2: B6Ng01-341P13.b_47_1166

seq1  GAATTCACCATACTTAACCTAATATAATATCATGTTATTTTACCTCCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCATACTTAACCTAATATAATATCATGTTATTTTACCTCCAGG  50

seq1  AGGCTTCAAATCGTGTTCCAAGTTATCGGCCAAACTGTGTTCCAAGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCAAATCGTGTTCCAAGTTATCGGCCAAACTGTGTTCCAAGAATT  100

seq1  AGGACCACATGAAATAATTTACTATAAGTTAGAGCTTTCCTGTAAAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCACATGAAATAATTTACTATAAGTTAGAGCTTTCCTGTAAAGAAA  150

seq1  GTCACACATCTCAATGCTAGTATAATAAACACTTTTAGAATGTATGCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACACATCTCAATGCTAGTATAATAAACACTTTTAGAATGTATGCTAT  200

seq1  GGATGAATTGCAATGAGTCTTATCCCCCTTGTTTTTAGATTATTTGTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAATTGCAATGAGTCTTATCCCCCTTGTTTTTAGATTATTTGTGGA  250

seq1  AATAATGTAATTTCAAGTAGTTAGGAAAATTTGTATAACTTGGTGTGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGTAATTTCAAGTAGTTAGGAAAATTTGTATAACTTGGTGTGGAG  300

seq1  AAAATATCAGCAGTTTTGGTGCTGTCCTCGATGTGGATGTAGGTAGATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATCAGCAGTTTTGGTGCTGTCCTCGATGTGGATGTAGGTAGATGC  350

seq1  ACTCCTAGCACTATAACTTTCCAGCTTTAGTGCTAAACCCCTTTAATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTAGCACTATAACTTTCCAGCTTTAGTGCTAAACCCCTTTAATTTC  400

seq1  AGTTCTTAACACTCAACCATAATCCAAAAACATTAAGTAGACTATTCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTAACACTCAACCATAATCCAAAAACATTAAGTAGACTATTCTAA  450

seq1  AATTTAAACAGCATATTGTTTTATAACACTAAGCAGGGTGATTTTCATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAACAGCATATTGTTTTATAACACTAAGCAGGGTGATTTTCATGA  500

seq1  CATCTTGTTTACTGCCTTGGGTTATTAAGCATCCCTTCATCCAGTGTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGTTTACTGCCTTGGGTTATTAAGCATCCCTTCATCCAGTGTATC  550

seq1  CAAGCTGTATGTACTAATTTTAGATGGTACGTAGTAACCATCTGGGTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGTATGTACTAATTTTAGATGGTACGTAGTAACCATCTGGGTTAT  600

seq1  CAGACTGAATTTCACTGTATCCCACTGTTTAAGTGGGTTTATTTCGGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGAATTTCACTGTATCCCACTGTTTAAGTGGGTTTATTTCGGTTA  650

seq1  ATATGTAACTTAAAGTACAAGTGTTGTCACATTGACAATTCAGATATACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAACTTAAAGTACAAGTGTTGTCACATTGACAATTCAGATATACA  700

seq1  AAGGGAAGATGTAAAAGGCTTCCTTTAAACAAGAAAGAGAATGGTCTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAGATGTAAAAGGCTTCCTTTAAACAAGAAAGAGAATGGTCTCAG  750

seq1  TTTGGTAAAGAAGAAAACTAATCTGTGTTACGATTGCTGACATCTCTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTAAAGAAGAAAACTAATCTGTGTTACGATTGCTGACATCTCTGAT  800

seq1  GAGAACAAATGGCTTAAATCTTTAATGTCAAGAGTCTGTTCCATGCTGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAAATGGCTTAAATCTTTAATGTCAAGAGTCTGTTCCATGCTGGG  850

seq1  TCATAATCCCACTGATAAGGGAGGACTATGGTTATCTGACTTGCCTGATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATCCCACTGATAAGGGAGGACTATGGTTATCTGACTTGCCTGATC  900

seq1  ATTTTTTATTTCCAGTGTAATATGGAGTACCAGATGACCAGACTTAAGAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTATTTCCAGTGTAATATGGAGTACCAGATGACCAGACTTAAGAC  950

seq1  ATCAAATAGATTCCAAACAAGCAAGTATAAAGCACTGACTTCTAATAAAT  1000
      ||| |||||||||||||| ||||  |||||||||||||| ||||   |||
seq2  ATC-AATAGATTCCAAAC-AGCAGTTATAAAGCACTGAC-TCTA--TAAT  995

seq1  GCCAGCAGCCTTCATTTCTCTTGACTTTTTGCAGATTTCACTG-TCTTAT  1049
      | |||||||  ||||||||| |||| ||||||||||||||||| ||||||
seq2  G-CAGCAGC--TCATTTCTC-TGAC-TTTTGCAGATTTCACTGTTCTTAT  1040

seq1  AGCA-CTGTGCTGGCTTTTAATG-CAAAT-GGATATCAGCAGACTC-ATT  1095
      |||| |||||||| ||||  ||| ||||| ||||||||||  |||| |||
seq2  AGCACCTGTGCTGCCTTT--ATGCCAAATGGGATATCAGCGAACTCAATT  1088

seq1  ATCTTATCTTA--CTCATGT-GAGGTCATTCA  1124
       ||||||||||  ||||||| |||||||||||
seq2  TTCTTATCTTAACCTCATGTGGAGGTCATTCA  1120


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