BAC Information

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BAC

Clone NameB6Ng01-342F21
Chromosome16 (Build37)
Map Location 53,768,509 - 53,769,096
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043430, LOC667895
Downstream geneLOC433027, LOC100043442
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342F21.bB6Ng01-342F21.g
ACCGA125474GA125475
length1,161732
definitionB6Ng01-342F21.b B6Ng01-342F21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaagcccatacctaaacatgataaaagcaatctacagcaaacca
ggagccaacatcaaagtaaatggagagaagctggaagccatcccactaaa
atcagggactagacaaggctgcctactttctccctaccttttaacatagt
acttgaagtattagccagagcaattcgacaacaaaaggagatcaagggga
tacaaattggaaaggaggaagtcaaaatatcacttttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggcg
tgactctaactaaggaagtgaaagatctttatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtggtaaaaactgca
tggtactggtatagagacagacaagtagaccaatgggaatagaattgaag
acccagaaatgaacccacacacctatggtcacttgatcttcgacaaggga
gctaaaaccatccagtggaagaaagacagcattttcaacaattggtgctg
gcacaactgggttgtatcatgtagaagatgcgaatgatcatacgtatctc
ctggtacttagtcaatctaaatgatcaaagaacttcacataaaacagaga
acactgaaattatagaggagaagtgggaaagctggagaattggcacagga
aatctgaacgaacgcaatgctggctgtaatcgaatgacaatggtacttat
gaactctctag

gaattcaaaataaatatcttttaagggaccaatatatttactgaataatt
cattctcagtattgtaagaatgttcagagaatataatgtaatcaaagtgt
acccaaggttaggatagtcacataatgctatatagaagtaacaaaaactt
tctgattggatctcacttatcagaagtaaatggaaaatatatgtttagaa
cagtgaatctcctcaaaaaccaacctatagttgtggagttcaaagcactc
aaaagtgaacctacacacctcttaatttgcaatgtggacatagtttcaaa
ctgtctcctaaatccatttcaatatacttatatattagttcggctcttag
atctcattgggtaaatttgcgcagtgacagcagtgaatgaaaataaagcc
tgcggaattagccattattcaaagaataagtgtttgtagtgtatttagcc
ataattgggacacgataccactccctgcctgaatatctcagtaaccattg
cagaagactggacagaatctttgaaagtgaaagatttacaaaggacagag
ctcaaatactgagttctaacttaaacaggtgcctatacatctgggaccag
tggttcactgcacaacacttggttgagatcaagccagccaacaatttagc
aaagtatgaagaaagactaacaggtacttacaccttactgaggaatcatt
gaatgtgaatcacttcaggagaagggagtgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_53768509_53769096
seq2: B6Ng01-342F21.g_67_654

seq1  GAATTCAAAATAAATATCTTTTAAGGGACCAATATATTTACTGAATAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATAAATATCTTTTAAGGGACCAATATATTTACTGAATAATT  50

seq1  CATTCTCAGTATTGTAAGAATGTTCAGAGAATATAATGTAATCAAAGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCAGTATTGTAAGAATGTTCAGAGAATATAATGTAATCAAAGTGT  100

seq1  ACCCAAGGTTAGGATAGTCACATAATGCTATATAGAAGTAACAAAAACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGGTTAGGATAGTCACATAATGCTATATAGAAGTAACAAAAACTT  150

seq1  TCTGATTGGATCTCACTTATCAGAAGTAAATGGAAAATATATGTTTAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTGGATCTCACTTATCAGAAGTAAATGGAAAATATATGTTTAGAA  200

seq1  CAGTGAATCTCCTCAAAAACCAACCTATAGTTGTGGAGTTCAAAGCACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAATCTCCTCAAAAACCAACCTATAGTTGTGGAGTTCAAAGCACTC  250

seq1  AAAAGTGAACCTACACACCTCTTAATTTGCAATGTGGACATAGTTTCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGAACCTACACACCTCTTAATTTGCAATGTGGACATAGTTTCAAA  300

seq1  CTGTCTCCTAAATCCATTTCAATATACTTATATATTAGTTCGGCTCTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCCTAAATCCATTTCAATATACTTATATATTAGTTCGGCTCTTAG  350

seq1  ATCTCATTGGGTAAATTTGCGCAGTGACAGCAGTGAATGAAAATAAAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATTGGGTAAATTTGCGCAGTGACAGCAGTGAATGAAAATAAAGCC  400

seq1  TGCGGAATTAGCCATTATTCAAAGAATAAGTGTTTGTAGTGTATTTAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGAATTAGCCATTATTCAAAGAATAAGTGTTTGTAGTGTATTTAGCC  450

seq1  ATAATTGGGACACGATACCACTCCCTGCCTGAATATCTCAGTAACCATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGGGACACGATACCACTCCCTGCCTGAATATCTCAGTAACCATTG  500

seq1  CAGAAGACTGGACAGAATCTTTGAAAGTGAAAGATTTACAAAGGACAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGACTGGACAGAATCTTTGAAAGTGAAAGATTTACAAAGGACAGAG  550

seq1  CTCAAATACTGAGTTCTAACTTAAACAGGTGCCTATAC  588
      ||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATACTGAGTTCTAACTTAAACAGGTGCCTATAC  588


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