BAC Information

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BAC

Clone NameB6Ng01-343I04
Chromosome16 (Build37)
Map Location 79,988,518 - 80,088,105
singlet/doubletdoublet
Overlap gene1700066C05Rik
Upstream genePrss7, EG383172
Downstream geneLOC621365, LOC100039724
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343I04.bB6Ng01-343I04.g
ACCGA126267GA126268
length1,1451,149
definitionB6Ng01-343I04.b B6Ng01-343I04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,086,961 - 80,088,105)(79,988,518 - 79,989,675)
sequence
gaattcaaccattgaataagtaacctgataattttccagaggaagacctg
gaggtctgagctgtaggcccaatccaaggccagatattgaacaaccacaa
aagtaaatatttcaaaccatgcctttttgatatgaagttcatctgtcttt
caacatcatcacaatctcccctgaagctttccatattgtcttgtttagta
agaaatacaatttacaaaatcaatgatgtatgtacatgtattatgaagag
aattgttcttttatgcatcttcagcgaaatgaataggttgatatattgga
caatgcagtctatgtactgttatgaaatactcagcgctctgatacatttg
attcaacaatttatttctcaattcaggttgttatttgttctgaacaaatc
atacagggtgattgtattatcgcactcggatctaggttagtaattgactg
ctgctgtctgtgaactaaagaagcaaaagaaatacaaccgataaagagaa
gacattttgcaacaatttgagttcgtctgcagattgcagaataagtaagt
tgctggttatgcgtttctatttaaataaagatacaaaataggaatgaata
atagccataatttaactttcacaaatagctcttaaatgcaatattctgct
agctatcagtgacatttcgctgatgtgaccaggacttggaggggttaaat
tactccaacaagcccacagctggctaatgatggaagcaggctcagacact
gacttctggattctacattttcatgaactgtcaccattctattacactgt
aagagttcttttttccccacagactttgtgaaagtgatttatttgtcttg
ttaggtattttttttttttttgtatgattgcccaaagtacagatttgcct
tgtccctcatgggtatatttcttgagattgttgaattttaggcaattttg
tctgcatattgaactagtaatttagaacattatgcaacctttacagttgg
catcctcctagtgctgatattctttgttctgtggctaatgataatcgtgg
tatgtgtgtcacctgggggatattcaaataatagaaatttaggaaaatac
taaatgaatctcttgattatctatcatgcagcctgacctcacctg

gaattcagcaggatcacatgtatagaacgtactattagaagaaagtgaga
aattagaacaaacaaacaaacaaaaaaatcccatgtattctaagataaaa
tgtaatccagggcctatttctcagcatctgtgtgggtgcagcaaacatca
tagagtccagacattattatctgagttccacaaaaaacaatgcctggggc
acagatgcactgtgcttaaaattatttggacagggccattaccatggaag
gataaatgagggagtaaagggatttgaaaagtatcaataacaaatgtgaa
gaaatacaaagtgattgaccattaaactcctgatagctgagcaagaaaaa
ctcagtgagtgcctgtgacctctgagaaatttcccaaaagacggctccac
accatcccacatctgaaaggaagactgaacagttaatctgccatagcttt
cctgtcttctgtcttgttatttatatgagacattgctcacaaaggcatac
attaaacactctattccttttaagcagtcattagaaaatatagcagcagc
gtcagagactcacactccttcatgtctccttatgagacagggccaggaga
gttaggaagtactcatggtactgacagaagcagcaatggcttctaagctt
taatgctgtggatttaggatgggtcatgaacagcactggtccagagagaa
agtgggaacttgacaggtctcatgacatgctttagaaataaaacaaagtt
aatgctaatcttcttcactcaggattactatcataaattttaaggaaacc
tgttatctgctgttgtgaaaagcagactcatactcaagaactgatgatca
tggggataattcttctccacacatatttatgctctcacttttggtacata
atggctgggaagacatgaaatttactctgaggtcacaattcagaatatta
gagaacattgggtgggagatgcaaatcataaaggaaactgtgtctttaac
aaacatccagccctaaaatacagccttgcgtgatagcaagaaaaacagag
caacactgagaaatagttattttatgatgttattagttattattttttct
taaatacctaaatagatggagcacttacttaagcagcttgcttggactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_80086961_80088105
seq2: B6Ng01-343I04.b_45_1189 (reverse)

seq1  CAGGTGAGTTTAAGGCTGCATGATAGATAATC-AGAGATTCATTTTAGTA  49
      ||||||||  | |||||||||||||||||||| ||||||||| |||||||
seq2  CAGGTGAG-GTCAGGCTGCATGATAGATAATCAAGAGATTCA-TTTAGTA  48

seq1  TTTT-CTTAATTTCTA-TATTTGAATTATCCCCCA-GTGACACACATACC  96
      |||| || |||||||| |||||||| ||||||||| ||||||||||||||
seq2  TTTTCCTAAATTTCTATTATTTGAA-TATCCCCCAGGTGACACACATACC  97

seq1  ACGA-TATCATTTAGCCACAGAACAAAGAATTATCAGCACTAGGAGGATG  145
      |||| ||||| ||||||||||||||||||| |||||||||||||||||||
seq2  ACGATTATCA-TTAGCCACAGAACAAAGAA-TATCAGCACTAGGAGGATG  145

seq1  CCAACTGTAAAGGTTTGCATAATGTTCTAAATTACTAGTTCAATATGCAG  195
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCAACTGTAAAGG-TTGCATAATGTTCTAAATTACTAGTTCAATATGCAG  194

seq1  ACAAAATTGCCTAAAATTCAACAATCTCAAGAAATATACCCATGAGGGAC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATTGCCTAAAATTCAACAATCTCAAGAAATATACCCATGAGGGAC  244

seq1  AAGGCAAATCTGTACTTTGGGCAATCATAC-AAAAAAAAAAAAATACCTA  294
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAGGCAAATCTGTACTTTGGGCAATCATACAAAAAAAAAAAAAATACCTA  294

seq1  ACAAGACAAATAAATCACTTTCACAAAGTCTGTGGGGAAAAAAGAACTCT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGACAAATAAATCACTTTCACAAAGTCTGTGGGGAAAAAAGAACTCT  344

seq1  TACAGTGTAATAGAATGGTGACAGTTCATGAAAATGTAGAATCCAGAAGT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGTAATAGAATGGTGACAGTTCATGAAAATGTAGAATCCAGAAGT  394

seq1  CAGTGTCTGAGCCTGCTTCCATCATTAGCCAGCTGTGGGCTTGTTGGAGT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCTGAGCCTGCTTCCATCATTAGCCAGCTGTGGGCTTGTTGGAGT  444

seq1  AATTTAACCCCTCCAAGTCCTGGTCACATCAGCGAAATGTCACTGATAGC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAACCCCTCCAAGTCCTGGTCACATCAGCGAAATGTCACTGATAGC  494

seq1  TAGCAGAATATTGCATTTAAGAGCTATTTGTGAAAGTTAAATTATGGCTA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGAATATTGCATTTAAGAGCTATTTGTGAAAGTTAAATTATGGCTA  544

seq1  TTATTCATTCCTATTTTGTATCTTTATTTAAATAGAAACGCATAACCAGC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCATTCCTATTTTGTATCTTTATTTAAATAGAAACGCATAACCAGC  594

seq1  AACTTACTTATTCTGCAATCTGCAGACGAACTCAAATTGTTGCAAAATGT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTACTTATTCTGCAATCTGCAGACGAACTCAAATTGTTGCAAAATGT  644

seq1  CTTCTCTTTATCGGTTGTATTTCTTTTGCTTCTTTAGTTCACAGACAGCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTTTATCGGTTGTATTTCTTTTGCTTCTTTAGTTCACAGACAGCA  694

seq1  GCAGTCAATTACTAACCTAGATCCGAGTGCGATAATACAATCACCCTGTA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCAATTACTAACCTAGATCCGAGTGCGATAATACAATCACCCTGTA  744

seq1  TGATTTGTTCAGAACAAATAACAACCTGAATTGAGAAATAAATTGTTGAA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGTTCAGAACAAATAACAACCTGAATTGAGAAATAAATTGTTGAA  794

seq1  TCAAATGTATCAGAGCGCTGAGTATTTCATAACAGTACATAGACTGCATT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGTATCAGAGCGCTGAGTATTTCATAACAGTACATAGACTGCATT  844

seq1  GTCCAATATATCAACCTATTCATTTCGCTGAAGATGCATAAAAGAACAAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAATATATCAACCTATTCATTTCGCTGAAGATGCATAAAAGAACAAT  894

seq1  TCTCTTCATAATACATGTACATACATCATTGATTTTGTAAATTGTATTTC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCATAATACATGTACATACATCATTGATTTTGTAAATTGTATTTC  944

seq1  TTACTAAACAAGACAATATGGAAAGCTTCAGGGGAGATTGTGATGATGTT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAAACAAGACAATATGGAAAGCTTCAGGGGAGATTGTGATGATGTT  994

seq1  GAAAGACAGATGAACTTCATATCAAAAAGGCATGGTTTGAAATATTTACT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGACAGATGAACTTCATATCAAAAAGGCATGGTTTGAAATATTTACT  1044

seq1  TTTGTGGTTGTTCAATATCTGGCCTTGGATTGGGCCTACAGCTCAGACCT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGTTGTTCAATATCTGGCCTTGGATTGGGCCTACAGCTCAGACCT  1094

seq1  CCAGGTCTTCCTCTGGAAAATTATCAGGTTACTTATTCAATGGTTGAATT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTCTTCCTCTGGAAAATTATCAGGTTACTTATTCAATGGTTGAATT  1144

seq1  C  1145
      |
seq2  C  1145


seq1: chr16_79988518_79989675
seq2: B6Ng01-343I04.g_68_1216

seq1  GAATTCAGCAGGATCACATGTATAGAACGTACTATTAGAAGAAAGTGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGGATCACATGTATAGAACGTACTATTAGAAGAAAGTGAGA  50

seq1  AATTAGAACAAACAAACAAACAAAAAAATCCCATGTATTCTAAGATAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAACAAACAAACAAACAAAAAAATCCCATGTATTCTAAGATAAAA  100

seq1  TGTAATCCAGGGCCTATTTCTCAGCATCTGTGTGGGTGCAGCAAACATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATCCAGGGCCTATTTCTCAGCATCTGTGTGGGTGCAGCAAACATCA  150

seq1  TAGAGTCCAGACATTATTATCTGAGTTCCACAAAAAACAATGCCTGGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTCCAGACATTATTATCTGAGTTCCACAAAAAACAATGCCTGGGGC  200

seq1  ACAGATGCACTGTGCTTAAAATTATTTGGACAGGGCCATTACCATGGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGCACTGTGCTTAAAATTATTTGGACAGGGCCATTACCATGGAAG  250

seq1  GATAAATGAGGGAGTAAAGGGATTTGAAAAGTATCAATAACAAATGTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATGAGGGAGTAAAGGGATTTGAAAAGTATCAATAACAAATGTGAA  300

seq1  GAAATACAAAGTGATTGACCATTAAACTCCTGATAGCTGAGCAAGAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATACAAAGTGATTGACCATTAAACTCCTGATAGCTGAGCAAGAAAAA  350

seq1  CTCAGTGAGTGCCTGTGACCTCTGAGAAATTTCCCAAAAGACGGCTCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGAGTGCCTGTGACCTCTGAGAAATTTCCCAAAAGACGGCTCCAC  400

seq1  ACCATCCCACATCTGAAAGGAAGACTGAACAGTTAATCTGCCATAGCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCCCACATCTGAAAGGAAGACTGAACAGTTAATCTGCCATAGCTTT  450

seq1  CCTGTCTTCTGTCTTGTTATTTATATGAGACATTGCTCACAAAGGCATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTTCTGTCTTGTTATTTATATGAGACATTGCTCACAAAGGCATAC  500

seq1  ATTAAACACTCTATTCCTTTTAAGCAGTCATTAGAAAATATAGCAGCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACACTCTATTCCTTTTAAGCAGTCATTAGAAAATATAGCAGCAGC  550

seq1  GTCAGAGACTCACACTCCTTCATGTCTCCTTATGAGACAGGGCCAGGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGACTCACACTCCTTCATGTCTCCTTATGAGACAGGGCCAGGAGA  600

seq1  GTTAGGAAGTACTCATGGTACTGACAGAAGCAGCAATGGCTTCTAAGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGAAGTACTCATGGTACTGACAGAAGCAGCAATGGCTTCTAAGCTT  650

seq1  TAATGCTGTGGATTTAGGATGGGTCATGAACAGCACTGGTCCAGAGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTGTGGATTTAGGATGGGTCATGAACAGCACTGGTCCAGAGAGAA  700

seq1  AGTGGGAACTTGACAGGTCTCATGACATGCTTTAGAAATAAAACAAAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAACTTGACAGGTCTCATGACATGCTTTAGAAATAAAACAAAGTT  750

seq1  AATGCTAATCTTCTTCACTCAGGATTACTATCATAAATTTTAAGGAAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTAATCTTCTTCACTCAGGATTACTATCATAAATTTTAAGGAAACC  800

seq1  TGTTATCTGCTGTTGTGAAAAGCAGACTCATACTCAAGAACTGATGATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATCTGCTGTTGTGAAAAGCAGACTCATACTCAAGAACTGATGATCA  850

seq1  TGGGGATAATTCTTCTCCACACATATTTATGCTCTCACTTTTGGTACATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGATAATTCTTCTCCACACATATTTATGCTCTCACTTTTGGTACATA  900

seq1  ATGGCTGGGAAGACATGAAATTTACTCTGAGGTCACAATTCAAGAATATT  950
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATGGCTGGGAAGACATGAAATTTACTCTGAGGTCACAATTC-AGAATATT  949

seq1  AGAGAACATT-GGTGGGAGATGCAAATCATAAAGGAAACTGTGTCTTTAA  999
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACATTGGGTGGGAGATGCAAATCATAAAGGAAACTGTGTCTTTAA  999

seq1  CAAACATCCAGCCCTAAAATACAGCCTTGCGTGATAGCAAAGAAAACAGA  1049
      ||||||||||||||||||||||||||||||||||||||||  ||||||||
seq2  CAAACATCCAGCCCTAAAATACAGCCTTGCGTGATAGCAAGAAAAACAGA  1049

seq1  GCAAACACTGAGAAATTAGTTATTTTAATGAATGTTATTAGTTATTA-TT  1098
      || |||||||||||| |||||||||| ||| |||||||||||||||| ||
seq2  GC-AACACTGAGAAA-TAGTTATTTT-ATG-ATGTTATTAGTTATTATTT  1095

seq1  TTTCTAAAATACCTAAAATAGGAATTGAGCACTTAACTTTAAGCAGCTTG  1148
      ||||| |||||||| ||||||  || |||||||||   ||||||||||||
seq2  TTTCTTAAATACCT-AAATAG--ATGGAGCACTTA--CTTAAGCAGCTTG  1140

seq1  TCTTGGACTT  1158
       |||||||||
seq2  -CTTGGACTT  1149


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