BAC Information

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BAC

Clone NameB6Ng01-343I07
Chromosome16 (Build37)
Map Location 23,868,931 - 23,869,495
singlet/doubletsinglet
Overlap genenone
Upstream geneDnajb11, Ahsg, Fetub, Hrg, Kng2, LOC624311, LOC666486, LOC666489, Kng1, LOC666493, Eif4a2, Rfc4, Adipoq, LOC100043541, EG625835, BC106179, St6gal1, Rtp1, Masp1, LOC100043018, Rtp4, EG625969, LOC100043023
Downstream geneSst, Rtp2, Bcl6, EG433009, LOC666580, LOC100043564, 1110054M08Rik, Lpp, A730098P11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343I07.bB6Ng01-343I07.g
ACCGA126273GA126274
length5591,217
definitionB6Ng01-343I07.b B6Ng01-343I07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
cagaacctgtaagcgagcacaaattgaatgtcgtcctttataagagtagc
cttggtcatggtgtctcttcacagcaatgaaaaccctaactaagacagtg
actgtccctttgaaattaatattgatcctccttccccctttaagataaaa
gtcttgttattctggtaggttggtcatgaactcagagctcaggtgatccc
ttgcctcaggcttctgaatagctgggattacacatatatgtcaccatatt
tgaatgttctacttttaagtaattgcatttgactataaagtttttgacac
attcatgcatgtataaaatgtattacaatcctattcacctcattactatc
tcttatcccccaattctgctgactccatttaattctcctcctttttatta
gttataggaattcacacctcttgtgggtctatgactatgcaaccatgcca
ggcccagaggacaatcttccacattgctccttcctcccctctgcgtcttc
caatgtctgtttcctgttctgcagtgattccattgtcccgtgggggtggg
ggtggagga
gaattctccactgaggaaaaccaaatggctgagaaacacctcaaaaatgt
ttaacatccttaatcttcagggaaatgcaaatcaaaacaaccctgagatt
ccacctcataccagtcagaatggctaagatcaaaaactcaggtgacagaa
gatgctggcaaggatgtggagaaagagaacacttctccattgctggtggg
attgcaagctggtacaactgctctggaaattagtttggtggttcctcaga
aaactggacatagtactaccggaagatccagcaataccactcctgggcat
atattaagaagatgctccaacttgtaataagaacacacactctactatgt
tcatagcaaccttatttataatagccagaagctggaaagaactcagatgt
ccctcgacagaggaatagatacagaaaatgtggtacatttatacagtgga
gagctatgcagctattaaaaacaacaaattcatgaaattcttagacatgt
ggatggatatcatgctaagtgaggtaacccaatcacaaaagaacacacat
gatatgcactcactgataagtagatattagcccagaaggtcagaatacat
aagatacaatttgcaaaacacatggaattcaagaaggaagaccaaagtgt
ggatacttttatccttcttagaagggggaacaaaatacccatggaaggag
ttacagagacaaagttcagaactgagactgaaagaataaccatccagaaa
ctgtcccacctggggatccacccataaacaaccatcaaactcagacacta
ttgcagaagcccacaagagtttgctgaccggagcctgatatagctgtttt
ctgagatgcccttccagtgcctgacaaatacagaagtggatgctcacaat
catccattgtatggagcacaggatccccaatgaaggagctagaaaaagta
cccaaggagctgaagtggattacagccccataggacgaagaacaatatga
aataaccagtatctctagaactcccaggactaaatcaccaatccagaaaa
cacttcatgggactagtgactctaagtgcatatgtagcagagaatgccta
gtcagtcatcaatggggagggagaagtcctggattctgttaagggtccta
tgttcagcttagggatggcaaggcccagattgggatcgttggtttgtaga
ggaaacaagacgggtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_23868931_23869495
seq2: B6Ng01-343I07.b_47_611 (reverse)

seq1  TCCTCCACCCCCACCCCCACGGGACAATGGAATCACTGCAGAACAGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCACCCCCACCCCCACGGGACAATGGAATCACTGCAGAACAGGAAA  50

seq1  CAGACATTGGAAGACGCAGAGGGGAGGAAGGAGCAATGTGGAAGATTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATTGGAAGACGCAGAGGGGAGGAAGGAGCAATGTGGAAGATTGTC  100

seq1  CTCTGGGCCTGGCATGGTTGCATAGTCATAGACCCACAAGAGGTGTGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGCCTGGCATGGTTGCATAGTCATAGACCCACAAGAGGTGTGAAT  150

seq1  TCCTATAACTAATAAAAAGGAGGAGAATTAAATGGAGTCAGCAGAATTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATAACTAATAAAAAGGAGGAGAATTAAATGGAGTCAGCAGAATTGG  200

seq1  GGGATAAGAGATAGTAATGAGGTGAATAGGATTGTAATACATTTTATACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAAGAGATAGTAATGAGGTGAATAGGATTGTAATACATTTTATACA  250

seq1  TGCATGAATGTGTCAAAAACTTTATAGTCAAATGCAATTACTTAAAAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGAATGTGTCAAAAACTTTATAGTCAAATGCAATTACTTAAAAGTA  300

seq1  GAACATTCAAATATGGTGACATATATGTGTAATCCCAGCTATTCAGAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTCAAATATGGTGACATATATGTGTAATCCCAGCTATTCAGAAGC  350

seq1  CTGAGGCAAGGGATCACCTGAGCTCTGAGTTCATGACCAACCTACCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCAAGGGATCACCTGAGCTCTGAGTTCATGACCAACCTACCAGAA  400

seq1  TAACAAGACTTTTATCTTAAAGGGGGAAGGAGGATCAATATTAATTTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAGACTTTTATCTTAAAGGGGGAAGGAGGATCAATATTAATTTCAA  450

seq1  AGGGACAGTCACTGTCTTAGTTAGGGTTTTCATTGCTGTGAAGAGACACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACAGTCACTGTCTTAGTTAGGGTTTTCATTGCTGTGAAGAGACACC  500

seq1  ATGACCAAGGCTACTCTTATAAAGGACGACATTCAATTTGTGCTCGCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCAAGGCTACTCTTATAAAGGACGACATTCAATTTGTGCTCGCTTA  550

seq1  CAGGTTCTGGAATTC  565
      |||||||||||||||
seq2  CAGGTTCTGGAATTC  565