BAC Information

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BAC

Clone NameB6Ng01-345F22
Chromosome16 (Build37)
Map Location 56,798,241 - 56,799,173
singlet/doubletsinglet
Overlap genenone
Upstream geneNfkbiz, Gm1752, Lrriq2, EG667966, LOC629242, Rpl24, Zbtb11, Pcnp, Rg9mtd1, Senp7, Impg2, LOC672835, Abi3bp, Tfg, Gpr128
Downstream geneTmem45a, LOC668026, LOC668036, 2310005G13Rik, Tomm70a, Nit2, Tbc1d23, Tmem30c, 2610528E23Rik, 4631422O05Rik, Col8a1, LOC435480
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345F22.bB6Ng01-345F22.g
ACCGA127586GA127587
length9371,174
definitionB6Ng01-345F22.b B6Ng01-345F22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataaggttttccttattgtctaagaacaacagaaatttgtggga
aggaaaaaaccctaggcataattcagatgtttacatttatagaaagatat
gaattgctatcattttaaaattgtataaactgtattcttatggtctagat
attcgtttatcacaaggttggtctacagatggtggcactattttggtagg
ttctgaaagcattaaaacattaggagaaagggccctgctggaagaaacag
gtcacataaacatgtattgaggagccctgtcttgttgctttttacttctc
ttctgtctttcatgagataaaaggactctttgattatgaattcttgctac
catgatgttctcccaaagcacatgggacaaaagaaaacaaaacaaaacaa
aaccaaagagaaaaacaaaacaaacaaacaaacaaacaaacaaaaaaacc
ccatagacttcttcagaaactacgaaccaaaccttatctttcctccttta
atttgcatgagtcaagatatcctcacacaggctcgaaagtcagtagcaca
agcactatttttacatacacgtacttgagaagtcaaaggagaggaaagat
aagtagtaaataatttgtttattaattcattctacccaatatattgtgta
ttgtgatgaacatgtggataacacaatgagccagaaggacaaggtccctg
ctgtcacacagcagacactcatggagacctggtagtgttttttgtttatg
tggtcactaatttgtttcatggacccaaacacgtcacacaaaacccaggt
cttcacattttaagtagccccatgggacctctggtccctgtgctggttta
gtcattaaagacttcatctgattaagatcaaggaaaagtgtttatcatat
gtgggcagacacgttatgattcagaattgggtgtccc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacacagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataatc
agcttccaaatgctgacaccatttgcatacactagcaagattatgctgaa
aggactctgatatagctgtctcttgtcagagtatgcctgggcctagcaaa
acatagaagtgggatgctcacagtcggctattggaatggatcacaatggt
ccccaaatgaagagcttagaagaaagtaccaaagaaggctaaaggatctg
caaccctataggtggaacatcatttatggactaccagtaccccggagctc
tttgaacttctaagctgcaatatgcaatcaagatgggccttagttcgcat
cactgggtagagaagagttcaatggaccggctaacttaaatgcttagttc
aggaatcgctcagtggcctatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_56798241_56799173
seq2: B6Ng01-345F22.b_49_985

seq1  GAATTCATAAGGTTTTCCTTATTGTCTAAGAACAACAGAAATTTGTGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAGGTTTTCCTTATTGTCTAAGAACAACAGAAATTTGTGGGA  50

seq1  AGGAAAAAACCCTAGGCATAATTCAGATGTTTACATTTATAGAAAGATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAACCCTAGGCATAATTCAGATGTTTACATTTATAGAAAGATAT  100

seq1  GAATTGCTATCATTTTAAAATTGTATAAACTGTATTCTTATGGTCTAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGCTATCATTTTAAAATTGTATAAACTGTATTCTTATGGTCTAGAT  150

seq1  ATTCGTTTATCACAAGGTTGGTCTACAGATGGTGGCACTATTTTGGTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGTTTATCACAAGGTTGGTCTACAGATGGTGGCACTATTTTGGTAGG  200

seq1  TTCTGAAAGCATTAAAACATTAGGAGAAAGGGCCCTGCTGGAAGAAACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAAGCATTAAAACATTAGGAGAAAGGGCCCTGCTGGAAGAAACAG  250

seq1  GTCACATAAACATGTATTGAGGAGCCCTGTCTTGTTGCTTTTTACTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATAAACATGTATTGAGGAGCCCTGTCTTGTTGCTTTTTACTTCTC  300

seq1  TTCTGTCTTTCATGAGATAAAAGGACTCTTTGATTATGAATTCTTGCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCTTTCATGAGATAAAAGGACTCTTTGATTATGAATTCTTGCTAC  350

seq1  CATGATGTTCTCCCAAAGCACATGGGACAAAAGAAAACAAAACAAAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGTTCTCCCAAAGCACATGGGACAAAAGAAAACAAAACAAAACAA  400

seq1  AACCAAAGAGAAAAACAAAACAAACAAACAAACAAACAAACAAAAAAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAGAGAAAAACAAAACAAACAAACAAACAAACAAACAAAAAAACC  450

seq1  CCATAGACTTCTTCAGAAACTACGAACCAAACCTTATCTTTCCTCCTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGACTTCTTCAGAAACTACGAACCAAACCTTATCTTTCCTCCTTTA  500

seq1  ATTTGCATGAGTCAAGATATCCTCACACAGGCTCGAAAGTCAGTAGCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCATGAGTCAAGATATCCTCACACAGGCTCGAAAGTCAGTAGCACA  550

seq1  AGCACTATTTTTACATACACGTACTTGAGAAGTCAAAGGAGAGGAAAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTATTTTTACATACACGTACTTGAGAAGTCAAAGGAGAGGAAAGAT  600

seq1  AAGTAGTAAATAATTTGTTTATTAATTCATTCTACCCAATATATTGTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGTAAATAATTTGTTTATTAATTCATTCTACCCAATATATTGTGTA  650

seq1  TTGTGATGAACATGTGGATAACACAATGAGCCAGAAGGACAAGGTCCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATGAACATGTGGATAACACAATGAGCCAGAAGGACAAGGTCCCTG  700

seq1  CTGTCACACAGCAGACACTCATGGAGACCTGGTAGTGTTTTTTGTTTATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCACACAGCAGACACTCATGGAGACCTGGTAGTGTTTTTTGTTTATG  750

seq1  TGGTCACTAATTTGTTTCATGGACCCAAACACGTCACACAAAACCCAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACTAATTTGTTTCATGGACCCAAACACGTCACACAAAACCCAGGT  800

seq1  CTTCACATTTTAAGTAGCCCCATGGGACCTCTGGTCCCTGTGCTGG-TTA  849
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTTCACATTTTAAGTAGCCCCATGGGACCTCTGGTCCCTGTGCTGGTTTA  850

seq1  GTCA-TAAAGACTTCATCTGATTAAGATC-AGGAAAAGTGTTTATCATAT  897
      |||| |||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTCATTAAAGACTTCATCTGATTAAGATCAAGGAAAAGTGTTTATCATAT  900

seq1  GTGGGCAGACACGTTATGATTCAG-ATTGGGTGTCCC  933
      |||||||||||||||||||||||| ||||||||||||
seq2  GTGGGCAGACACGTTATGATTCAGAATTGGGTGTCCC  937