BAC Information

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BAC

Clone NameB6Ng01-345G23
Chromosome16 (Build37)
Map Location 32,083,174 - 32,168,474
singlet/doubletdoublet
Overlap genePigx, 1500031L02Rik, Lrrc33
Upstream geneCentb2, Ppp1r2, Apod, 1700007E05Rik, Bdh1, Gm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2
Downstream geneBex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, Lrch3, EG625660, Iqcg, Rpl35a, Lmln, LOC638791
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345G23.bB6Ng01-345G23.g
ACCGA127631GA127632
length1,1401,146
definitionB6Ng01-345G23.b B6Ng01-345G23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,167,340 - 32,168,474)(32,083,174 - 32,084,315)
sequence
gaattctggctggacactctggctttcagacctgctggtgtgaggaatgt
cctgttttcagctttgccctagtttctcctggaagtctttgggtccttct
gctgctactatagaagaacaatctgtgccattttccagccaactacagcc
ttgtttctccacagcctttaaaatggccagcttctaagtttccttgaaag
aaatcttgccgagaatgctaatgggtaaagcatatacaagtaggtatatg
ctactgggtgtggtgataaatatgtgaagcacttgggaagtggaggcagg
gggatcaaggcagggccaactaaatgagactctgtccaaaaaaaaaaaaa
aaaaaaaaaaaaaaagcaaagaggaagaaaagtggatgaggatgttagaa
ctcaggcattgttgattcttaaactggctgaaccaggatttaaacactgg
cccaggtaaacagggacaatggctggccataaaggccctaagcaaggaac
gaattgatccccacactttttctcgaatgatcgatccatggaagatgggt
ggagtctaacttggaagatggacaagatttgggacaggtagacaactaag
gaagttactgaagtcatccagacatgagttggtgagagctagacacttgg
aagaaggaagaaggcttataagatgcaggaagtaaacaaaagcaacccag
gaagctcctgaaacatgcaagattcataagactctcttccccaagcccat
aacacagtaatctatagagagaatctagtggggagccacctgtgggtgta
ggagtctctgggagtgcagttttgtgagttgtcattcatgctagggtagg
tttcttggtgaatcactgtgttcctataagtaaccccaggaaactcaccg
gctctctaagctagatttggggtggaaattggttctttgatctgtcatca
atgcccttgtgtggtgaataacctgttaagatctcccccaagaaaaagtc
acacaacatcagattcagacccattcctagggacagaagacatactcatg
ggtaaaggcacctcagtgttctcctcagaaagaccttgagattctctctc
cagcccatgaagttattgttcaatacctgtaactctagtt
gaattctttcttatatatattaaaaaaaaaaaaaaacacccaggtatgga
actcgattagtttgaaactttatagtcattttaaagatttctgatggtgg
cacacacttttaatcacaggacttaagaggcagaggtggaggcagaagca
ggagaaaccctgtctagaaaaaacaaaataaaaaaataataacaaaaaag
atttttaatattactaactttatggcactgggttgccccttctaacattt
aaatcaataaggattgttgtaacaaatcaaatcttatatgtaaaattatg
aatgatttattctcataaaaacactaaaagactacagcagagtaagaaac
tgtaagtatgtaaagagctcccatcactcaacacaaaacaatgtcaatac
actcagactcttgcttctgcctcccaagggctggatcaaaggcatgtacc
acactaggccaacattcttattctaaagggatgtgtgtgtacacatgtgc
atgactgtaaaggccagaagtcaacattgggtagtaggtgttcccaggag
ctatccacttaatgtttttagtttttgatccaagtctctgccttgaacct
ggggctcactagtcagtctaggctggctggccaggcagctcctgggattt
tcctgtcctcacccctcccgaccccccacctccacactacaatacaccca
tacacactccaggactgagactataagcattcaccatatacagtgtttta
cagggatgttggggaatgaactcaggtcttcatgcttatgtggtgagcac
ttcactgacatgtctcccttagctgtagagtgtgtttattaattaacctg
tagcatttatgtccctattttgtttctaccaagtgtaacactaaatcaag
actatttgttttttgtttaactgcattttttgtaaataattatctaaatt
actttattcttaattataaaggtatctccatgtttagtgtgaattaaatg
ttcttattcgcaaaaacaagaataatttgacactaataaatatgaaactt
atttttttctaatagcaatgtagacagttcactcttaagtatgagttaca
caatggaaactgttcttctacttagactacgagaacacttgaaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32167340_32168474
seq2: B6Ng01-345G23.b_47_1186 (reverse)

seq1  AACTAGAGTTACAGGTGATTGTGAACCACCACATCAT-GGCTGG-GAGAG  48
      |||||||||||||||| ||  ||||| |  || |||| |||||| |||||
seq2  AACTAGAGTTACAGGT-AT--TGAACAATAACTTCATGGGCTGGAGAGAG  47

seq1  AA-CTCAGGGTC-TTCTGA-GAGAACACTGA-GTGCTTTTAACCATTGAG  94
      || |||| |||| |||||| ||||||||||| |||| |||| ||| ||||
seq2  AATCTCAAGGTCTTTCTGAGGAGAACACTGAGGTGCCTTTACCCA-TGAG  96

seq1  TTATGTCTTCTGT-CCTAGGAATGGTTCTTGAATCTGATTGTTGTGTGAC  143
       |||||||||||| ||||||||||| || ||||||||| |||||||||||
seq2  -TATGTCTTCTGTCCCTAGGAATGGGTC-TGAATCTGA-TGTTGTGTGAC  143

seq1  -TTTTCTT-GGGGAGATCTTAACA-GTTATTCACCACAACAAGGCATTGA  190
       ||||||| ||||||||||||||| |||||||||||||  | ||||||||
seq2  TTTTTCTTGGGGGAGATCTTAACAGGTTATTCACCACACAAGGGCATTGA  193

seq1  TGACAGATCAAAGAACCAA-TTCCA-CCCAAATCTAGCTTAGAGAGCCGG  238
      ||||||||||||||||||| ||||| ||||||||||||||||||||||||
seq2  TGACAGATCAAAGAACCAATTTCCACCCCAAATCTAGCTTAGAGAGCCGG  243

seq1  TGAGTTTCCTGGGGTTACTTATAGGAACACAGTGATTCACCAAGAAACCT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTCCTGGGGTTACTTATAGGAACACAGTGATTCACCAAGAAACCT  293

seq1  ACCCTAGCATGAATGACAACTCACAAAACTGCACTCCCAGAGACTCCTAC  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAGCATGAATGACAACTCACAAAACTGCACTCCCAGAGACTCCTAC  343

seq1  ACCCACAGGTGGCTCCCCACTAGATTCTCTCTATAGATTACTGTGTTATG  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACAGGTGGCTCCCCACTAGATTCTCTCTATAGATTACTGTGTTATG  393

seq1  GGCTTGGGGAAGAGAGTCTTATGAATCTTGCATGTTTCAGGAGCTTCCTG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGGGGAAGAGAGTCTTATGAATCTTGCATGTTTCAGGAGCTTCCTG  443

seq1  GGTTGCTTTTGTTTACTTCCTGCATCTTATAAGCCTTCTTCCTTCTTCCA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCTTTTGTTTACTTCCTGCATCTTATAAGCCTTCTTCCTTCTTCCA  493

seq1  AGTGTCTAGCTCTCACCAACTCATGTCTGGATGACTTCAGTAACTTCCTT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTAGCTCTCACCAACTCATGTCTGGATGACTTCAGTAACTTCCTT  543

seq1  AGTTGTCTACCTGTCCCAAATCTTGTCCATCTTCCAAGTTAGACTCCACC  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTCTACCTGTCCCAAATCTTGTCCATCTTCCAAGTTAGACTCCACC  593

seq1  CATCTTCCATGGATCGATCATTCGAGAAAAAGTGTGGGGATCAATTCGTT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCCATGGATCGATCATTCGAGAAAAAGTGTGGGGATCAATTCGTT  643

seq1  CCTTGCTTAGGGCCTTTATGGCCAGCCATTGTCCCTGTTTACCTGGGCCA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCTTAGGGCCTTTATGGCCAGCCATTGTCCCTGTTTACCTGGGCCA  693

seq1  GTGTTTAAATCCTGGTTCAGCCAGTTTAAGAATCAACAATGCCTGAGTTC  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTAAATCCTGGTTCAGCCAGTTTAAGAATCAACAATGCCTGAGTTC  743

seq1  TAACATCCTCATCCACTTTTCTTCCTCTTTGCTTTTTTTTTTTTTTTTTT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATCCTCATCCACTTTTCTTCCTCTTTGCTTTTTTTTTTTTTTTTTT  793

seq1  TTTTTTTTTTGGACAGAGTCTCATTTAGTTGGCCCTGCCTTGATCCCCCT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTGGACAGAGTCTCATTTAGTTGGCCCTGCCTTGATCCCCCT  843

seq1  GCCTCCACTTCCCAAGTGCTTCACATATTTATCACCACACCCAGTAGCAT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCACTTCCCAAGTGCTTCACATATTTATCACCACACCCAGTAGCAT  893

seq1  ATACCTACTTGTATATGCTTTACCCATTAGCATTCTCGGCAAGATTTCTT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTACTTGTATATGCTTTACCCATTAGCATTCTCGGCAAGATTTCTT  943

seq1  TCAAGGAAACTTAGAAGCTGGCCATTTTAAAGGCTGTGGAGAAACAAGGC  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGAAACTTAGAAGCTGGCCATTTTAAAGGCTGTGGAGAAACAAGGC  993

seq1  TGTAGTTGGCTGGAAAATGGCACAGATTGTTCTTCTATAGTAGCAGCAGA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTGGCTGGAAAATGGCACAGATTGTTCTTCTATAGTAGCAGCAGA  1043

seq1  AGGACCCAAAGACTTCCAGGAGAAACTAGGGCAAAGCTGAAAACAGGACA  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCCAAAGACTTCCAGGAGAAACTAGGGCAAAGCTGAAAACAGGACA  1093

seq1  TTCCTCACACCAGCAGGTCTGAAAGCCAGAGTGTCCAGCCAGAATTC  1135
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCACACCAGCAGGTCTGAAAGCCAGAGTGTCCAGCCAGAATTC  1140

seq1: chr16_32083174_32084315
seq2: B6Ng01-345G23.g_63_1208

seq1  GAATTCTTTCTTATATATATTAAAAAAAAAAAAAAACACCCAGGTATGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTATATATATTAAAAAAAAAAAAAAACACCCAGGTATGGA  50

seq1  ACTCGATTAGTTTGAAACTTTATAGTCATTTTAAAGATTTCTGATGGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGATTAGTTTGAAACTTTATAGTCATTTTAAAGATTTCTGATGGTGG  100

seq1  CACACACTTTTAATCACAGGACTTAAGAGGCAGAGGTGGAGGCAGAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACTTTTAATCACAGGACTTAAGAGGCAGAGGTGGAGGCAGAAGCA  150

seq1  GGAGAAACCCTGTCTAGAAAAAACAAAATAAAAAAATAATAACAAAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAACCCTGTCTAGAAAAAACAAAATAAAAAAATAATAACAAAAAAG  200

seq1  ATTTTTAATATTACTAACTTTATGGCACTGGGTTGCCCCTTCTAACATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAATATTACTAACTTTATGGCACTGGGTTGCCCCTTCTAACATTT  250

seq1  AAATCAATAAGGATTGTTGTAACAAATCAAATCTTATATGTAAAATTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAATAAGGATTGTTGTAACAAATCAAATCTTATATGTAAAATTATG  300

seq1  AATGATTTATTCTCATAAAAACACTAAAAGACTACAGCAGAGTAAGAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTTATTCTCATAAAAACACTAAAAGACTACAGCAGAGTAAGAAAC  350

seq1  TGTAAGTATGTAAAGAGCTCCCATCACTCAACACAAAACAATGTCAATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTATGTAAAGAGCTCCCATCACTCAACACAAAACAATGTCAATAC  400

seq1  ACTCAGACTCTTGCTTCTGCCTCCCAAGGGCTGGATCAAAGGCATGTACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGACTCTTGCTTCTGCCTCCCAAGGGCTGGATCAAAGGCATGTACC  450

seq1  ACACTAGGCCAACATTCTTATTCTAAAGGGATGTGTGTGTACACATGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAGGCCAACATTCTTATTCTAAAGGGATGTGTGTGTACACATGTGC  500

seq1  ATGACTGTAAAGGCCAGAAGTCAACATTGGGTAGTAGGTGTTCCCAGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTGTAAAGGCCAGAAGTCAACATTGGGTAGTAGGTGTTCCCAGGAG  550

seq1  CTATCCACTTAATGTTTTTAGTTTTTGATCCAAGTCTCTGCCTTGAACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCACTTAATGTTTTTAGTTTTTGATCCAAGTCTCTGCCTTGAACCT  600

seq1  GGGGCTCACTAGTCAGTCTAGGCTGGCTGGCCAGGCAGCTCCTGGGATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTCACTAGTCAGTCTAGGCTGGCTGGCCAGGCAGCTCCTGGGATTT  650

seq1  TCCTGTCCTCACCCCTCCCGACCCCCCACCTCCACACTACAATACACCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCCTCACCCCTCCCGACCCCCCACCTCCACACTACAATACACCCA  700

seq1  TACACACTCCAGGACTGAGACTATAAGCATTCACCATATACAGTGTTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACTCCAGGACTGAGACTATAAGCATTCACCATATACAGTGTTTTA  750

seq1  CAGGGATGTTGGGGAATGAACTCAGGTCTTCATGCTTATGTGGTGAGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATGTTGGGGAATGAACTCAGGTCTTCATGCTTATGTGGTGAGCAC  800

seq1  TTCACTGACATGTCTCCCTTAGCTGTAGAGTGTGTTTATTAATTAACCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGACATGTCTCCCTTAGCTGTAGAGTGTGTTTATTAATTAACCTG  850

seq1  TAGCATTTATGTCCCTATTTTGTTTCTACCAAGTGTAACACTAAATCAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTTATGTCCCTATTTTGTTTCTACCAAGTGTAACACTAAATCAAG  900

seq1  ACTATTTGTTTTTTGTTTAACTGCATTTTTTGTAAATAATTATCTAAATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTGTTTTTTGTTTAACTGCATTTTTTGTAAATAATTATCTAAATT  950

seq1  ACTTTATTCTTAATTATAAAGGTATCTCCATGTTTAGTGTGAATTAAAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACTTTATTCTTAATTATAAAGGTATCTCCATGTTTAGTGTGAATT-AAAT  999

seq1  GTTC-TATTCGC-AAAACAAGAATAATTTGACACTAATAAATAATGAACT  1048
      |||| ||||||| ||||||||||||||||||||||||||||||   ||||
seq2  GTTCTTATTCGCAAAAACAAGAATAATTTGACACTAATAAATATGAAACT  1049

seq1  TATTTTTCT---ATAGCAAATGTAGACAG-TCACTTCTAAGTATGAATTT  1094
      ||||||| |   ||||| ||||||||||| |||||  ||||||||| || 
seq2  TATTTTTTTCTAATAGC-AATGTAGACAGTTCACTCTTAAGTATGAGTT-  1097

seq1  AACACAATG--AAATGTTC-TCTAC-TAGACTACCAAAGAACACTTGAAG  1140
       ||||||||  || ||||| ||||| ||||||||   |||||||||||||
seq2  -ACACAATGGAAACTGTTCTTCTACTTAGACTAC--GAGAACACTTGAAG  1144

seq1  GT  1142
      ||
seq2  GT  1146