BAC Information

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BAC

Clone NameB6Ng01-347I08
Chromosome16 (Build37)
Map Location 28,067,744 - 28,068,891
singlet/doubletsinglet
Overlap genenone
Upstream geneOstn, Uts2d, Ccdc50
Downstream geneFgf12, 1600021P15Rik, EG666717
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347I08.bB6Ng01-347I08.g
ACCGA129099GA129100
length1,2151,132
definitionB6Ng01-347I08.b B6Ng01-347I08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaatgggtaagattttatagattttattttgttcatctgttaa
ttttgcttgcttaaattttgtataagaatgcgcgcacacacacacacaca
cacgattatagaagtactcagagtttgttattatgagggtgacatcagaa
gggaacccatgaggtggcaccaagcacctgtttttacataattgccatgt
ttaaaaataacagcatctcctgcatttcaacactttcatacgcttaagaa
agaaagttacagagcagcagcggtcgccatcttggttccgggactcagca
gaacttaggaaattagtctgaacaggttagagggtacaccagagaaccgg
acagcttctgggacgggcagaagcacagacccgctgaggcagcacccttg
gtgggccgcagacagccggccaccgtccggaccagaggacaggtgtccgc
ctggcttgggaggcggcctcagtctcagcagcagcggttgccatcttggt
tccgggactcagcagaacttaggaaattagtctgaacaggttagagggtg
ctccagagaaccggacagcttctgggacgggcagaagcacagagctgctg
aggcagcaccctttgcaggctgcagacagccggccaccatccggaccaga
ggacaggtgtctggctcgggaggcggcctcagcctcaggagcagcggtcg
ccatcttggttccaggactccctggaacttaggaatttagtctgcacagg
tgagagtctgcaccacagaagctgacagcttctgggaactgccaaagcaa
cacagcttctgagagaggccctgttttgggccttcttcttcgaccaggag
gaggtccaaaaacaagatgtctgcgcaccttccctgtaagagagcttgcc
agcagagagtgctctgagcactgaaactcagaggagagaatctgtctccc
aggtctgctgagagactgtaacagaatcaccagagacatctctaacagag
tcactatactactactccagagattacagatggcgaaagtaaacgtagat
ctactaaaagacagacactcacatcatcagaccagcactaccactcgcag
tcagggcacccaaccacccgaacctagacttgaatgaagccattctcatg
gagatgtaagaatcagaggaccttataatcctaagaaataccggaaaacc
tggcttaagagttcg

gaattccttttctaatctacttcacttaaattattcctttttcctcttca
ctttctagctagacacacatgcaaatgtatactctttgactttaaaccct
gaattcttgtgcttgctccaatactgtactcagttcctggacaagtttcc
atgtctagccttaactgaaatatccctcctaaatatggctaccccataat
cctctacatctttatttttattcacatattaaaagagactctccaaagtt
aattaatccagaaatatcaagatgggtaggatattcttgattacctagtt
ctttataggagggagaaatgaaggatagacccgagaaagatacaggaaac
taggagcccagttatgaatggtgctaccacagagtaaggagcaaggtccc
ctctagcagcttactgttctcagaaccttcaaaatatcataaccagttta
atctgctgacctctaggtctgaaagttagtaaattagttctgcttgaagg
cactgaatttgcagtaatttttaaaatagacattggaaatgaataccagt
tcctaggattagctgaatgaaagcaaagtacaatgaaacagaaagaaatc
ataatattgattttttaaagtatcatagccacagtatacaatccacaaca
tagagctgtgcagttcagtttactacccacagttatttggatgataatgg
cctctataggctcatatatttgaaaggttaacccccatttggctgaattt
ggggggaaaggattggaagtgtagccttgttgaaggaggtgtgacactgg
aagtgggctttgaagattctaaagtccttgtcattctcacttaacttttt
aatcgtgtgtttgtggatcaagatgtggactctctcctactgttccaggg
acataccttcctgactgctaccacgttcctaaccatgatggccatgtact
ctaaccatctggaatcatgagccccaaatttagtatttcttttataatta
ccttggtcatggtgtttctcatagcatggaaagtaactaagacatagtgt
attgtcagatcctcagtgtccacatgagtaaccaacaaatgtgtgacatc
atggtggttttttcttagccaggttatgagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_28067744_28068891
seq2: B6Ng01-347I08.g_68_1199

seq1  GAATTCCTTTTCTAATCTACTTCACTTAAATTATTCCTTTTTCCTCTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTCTAATCTACTTCACTTAAATTATTCCTTTTTCCTCTTCA  50

seq1  CTTTCTAGCTAGACACACATGCAAATGTATACTCTTTGACTTTAAACCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTAGCTAGACACACATGCAAATGTATACTCTTTGACTTTAAACCCT  100

seq1  GAATTCTTGTGCTTGCTCCAATACTGTACTCAGTTCCTGGACAAGTTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTGCTTGCTCCAATACTGTACTCAGTTCCTGGACAAGTTTCC  150

seq1  ATGTCTAGCCTTAACTGAAATATCCCTCCTAAATATGGCTACCCCATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTAGCCTTAACTGAAATATCCCTCCTAAATATGGCTACCCCATAAT  200

seq1  CCTCTACATCTTTATTTTTATTCACATATTAAAAGAGACTCTCCAAAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACATCTTTATTTTTATTCACATATTAAAAGAGACTCTCCAAAGTT  250

seq1  AATTAATCCAGAAATATCAAGATGGGTAGGATATTCTTGATTACCTAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATCCAGAAATATCAAGATGGGTAGGATATTCTTGATTACCTAGTT  300

seq1  CTTTATAGGAGGGAGAAATGAAGGATAGACCCGAGAAAGATACAGGAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATAGGAGGGAGAAATGAAGGATAGACCCGAGAAAGATACAGGAAAC  350

seq1  TAGGAGCCCAGTTATGAATGGTGCTACCACAGAGTAAGGAGCAAGGTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGCCCAGTTATGAATGGTGCTACCACAGAGTAAGGAGCAAGGTCCC  400

seq1  CTCTAGCAGCTTACTGTTCTCAGAACCTTCAAAATATCATAACCAGTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGCAGCTTACTGTTCTCAGAACCTTCAAAATATCATAACCAGTTTA  450

seq1  ATCTGCTGACCTCTAGGTCTGAAAGTTAGTAAATTAGTTCTGCTTGAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCTGACCTCTAGGTCTGAAAGTTAGTAAATTAGTTCTGCTTGAAGG  500

seq1  CACTGAATTTGCAGTAATTTTTAAAATAGACATTGGAAATGAATACCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAATTTGCAGTAATTTTTAAAATAGACATTGGAAATGAATACCAGT  550

seq1  TCCTAGGATTAGCTGAATGAAAGCAAAGTACAATGAAACAGAAAGAAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGATTAGCTGAATGAAAGCAAAGTACAATGAAACAGAAAGAAATC  600

seq1  ATAATATTGATTTTTTAAAGTATCATAGCCACAGTATACAATCCACAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATTGATTTTTTAAAGTATCATAGCCACAGTATACAATCCACAACA  650

seq1  TAGAGCTGTGCAGTTCAGTTTACTACCCACAGTTATTTGGATGATAATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCTGTGCAGTTCAGTTTACTACCCACAGTTATTTGGATGATAATGG  700

seq1  CCTCTATAGGCTCATATATTTGAAAGGTTAACCCCCATTTGGCTGAATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTATAGGCTCATATATTTGAAAGGTTAACCCCCATTTGGCTGAATTT  750

seq1  GGGGGGAAAGGATTGGAAGTGTAGCCTTGTTGAAGGAGGTGTGACACTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGAAAGGATTGGAAGTGTAGCCTTGTTGAAGGAGGTGTGACACTGG  800

seq1  AAGTGGGCTTTGAAGATTCTAAAGTCCTTGTCATTCTCACTTAACTTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGCTTTGAAGATTCTAAAGTCCTTGTCATTCTCACTTAACTTTTT  850

seq1  AATCGTGTGTTTGTGGATCAAGATGTGGACTCTCTCCTACTGTTCCAGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGTGTGTTTGTGGATCAAGATGTGGACTCTCTCCTACTGTTCCAGGG  900

seq1  ACATACCTTCCTGACTGCTACCACGTTCCTAACCATGATGGCCATGTACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACCTTCCTGACTGCTACCACGTTCCTAACCATGATGGCCATGTACT  950

seq1  CTAACCATCTGGAATCATGAGCCCCAAATTTAGTATTTTCTTTTATAAAT  1000
      ||||||||||||||||||||||||||||||||||| |||||||||| |||
seq2  CTAACCATCTGGAATCATGAGCCCCAAATTTAGTA-TTTCTTTTAT-AAT  998

seq1  TACCTTGGTCATGGTGTTTTCTCATAGCAATGGAAAAGTAACTAAGACAT  1050
      |||||||||||||||| ||||||||||| |||| ||||||||||||||||
seq2  TACCTTGGTCATGGTG-TTTCTCATAGC-ATGG-AAAGTAACTAAGACAT  1045

seq1  AAGTGTA-TGTCAGAATCTCAGTGGTTCACATTGAGTTAAACAAACAAAA  1099
       |||||| |||||||  |||||| || |||| |||||  ||| ||| |||
seq2  -AGTGTATTGTCAGATCCTCAGT-GTCCACA-TGAGT--AACCAAC-AAA  1089

seq1  TGTGTGACATCCATGTGGTTTTTTTTTCCTTTTAGCACAGTTATGAGAA  1148
      |||||||||||   |||||||||      | |||||   ||||||||||
seq2  TGTGTGACATCATGGTGGTTTTT------TCTTAGCCAGGTTATGAGAA  1132


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