BAC Information

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BAC

Clone NameB6Ng01-347K07
Chromosome16 (Build37)
Map Location 28,078,269 - 28,079,459
singlet/doubletsinglet
Overlap genenone
Upstream geneOstn, Uts2d, Ccdc50
Downstream geneFgf12, 1600021P15Rik, EG666717
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347K07.bB6Ng01-347K07.g
ACCGA129185GA129186
length1,1781,151
definitionB6Ng01-347K07.b B6Ng01-347K07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtgatgtgcttccatttctattgtatgggaatttggttgttca
aaggcaaaaccttttaagtaaatgtggtgatatttggtctcccccttcct
aatgtttaaatatctggaataatataaccataagaaataggcatcaagga
agtacaaagcatggggcaggaggtgaatagagtcctgtattggagagtag
ttataaaagcctggttgcttaagtcacagaggcttctctaactgccggct
aagtttcttgctttacacagttgggtctaccagtttgtgcattctaatgt
aactccatgaatgtccaccgtggctcccattttactgccttgatcatcct
tgcactttatcttgtgtgaccaaaccagaggataagttggatcatttttc
acctttgcatcaagagtcttctcagcttctttggtcccgtgaaggattga
aagtcaagtttctcagtaatcaaggtctgtagttggagaaatggtccttt
attatcattctttcagtgtcctctatgtgaaaactggccagtttttgttt
gtttcagatttactttactgatgtgtcctatgtatatgtatatctctatg
tgtgccacatgtgtgcacattccagcagagtcaaaagaagctgttggatc
ctgcagatctagagttaaaggcagttgtgaactgtcagatatgagtgctc
agaagagaactaaggtcgtctaaaagaacagcaagctcttgtttgcattt
gtttccttcctatgtttattactgcaggttgagatgcagccatcagagaa
tcattttgaattacattaactcagttttcagaagcacaggctgagaagca
cattgcttgccttccaagctatggcacagcaacctttctgagcattttgc
cagagcttaatgacatttgtcagtttcccaactgacatatttatgaattt
ctccatctgctactttgtccatgttatgtatatccattttttttcataat
cttcccacttacagacaccatctttattttccacaagaaaaatttgacat
ttggagatctaaatagatgtatctgactggatagattttcatcctgccca
caatagttacccagtagcagaaggaggaaatgagtcagtagtaagatctc
tattccttctcacaaagcacatcataga

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcaaacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgaccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggccctagcaaa
cacagaagtagatgctcatagtcagctaatggatggatcacagggctccc
aatggaggagctagaagaaagtacccaaggagctaagggatctgcaaacc
tataggtggatcaacatatgactacagtaccctggagctcttgacctcta
gctgcatatgtatcaaagatggctagtgcatcactggaaagagagtcatg
acaccaactttaattgccccagaacaggacgcagccaaaaagttaattgc
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_28078269_28079459
seq2: B6Ng01-347K07.b_48_1225

seq1  GAATTCTGTGATGTGCTTCCATTTCTATTGTATGGGAATTTGGTTGTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGATGTGCTTCCATTTCTATTGTATGGGAATTTGGTTGTTCA  50

seq1  AAGGCAAAACCTTTTAAGTAAATGTGGTGATATTTGGTCTCCCCCTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAAACCTTTTAAGTAAATGTGGTGATATTTGGTCTCCCCCTTCCT  100

seq1  AATGTTTAAATATCTGGAATAATATAACCATAAGAAATAGGCATCAAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTAAATATCTGGAATAATATAACCATAAGAAATAGGCATCAAGGA  150

seq1  AGTACAAAGCATGGGGCAGGAGGTGAATAGAGTCCTGTATTGGAGAGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAAAGCATGGGGCAGGAGGTGAATAGAGTCCTGTATTGGAGAGTAG  200

seq1  TTATAAAAGCCTGGTTGCTTAAGTCACAGAGGCTTCTCTAACTGCCGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAAGCCTGGTTGCTTAAGTCACAGAGGCTTCTCTAACTGCCGGCT  250

seq1  AAGTTTCTTGCTTTACACAGTTGGGTCTACCAGTTTGTGCATTCTAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCTTGCTTTACACAGTTGGGTCTACCAGTTTGTGCATTCTAATGT  300

seq1  AACTCCATGAATGTCCACCGTGGCTCCCATTTTACTGCCTTGATCATCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCATGAATGTCCACCGTGGCTCCCATTTTACTGCCTTGATCATCCT  350

seq1  TGCACTTTATCTTGTGTGACCAAACCAGAGGATAAGTTGGATCATTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTTTATCTTGTGTGACCAAACCAGAGGATAAGTTGGATCATTTTTC  400

seq1  ACCTTTGCATCAAGAGTCTTCTCAGCTTCTTTGGTCCCGTGAAGGATTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTGCATCAAGAGTCTTCTCAGCTTCTTTGGTCCCGTGAAGGATTGA  450

seq1  AAGTCAAGTTTCTCAGTAATCAAGGTCTGTAGTTGGAGAAATGGTCCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAAGTTTCTCAGTAATCAAGGTCTGTAGTTGGAGAAATGGTCCTTT  500

seq1  ATTATCATTCTTTCAGTGTCCTCTATGTGAAAACTGGCCAGTTTTTGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCATTCTTTCAGTGTCCTCTATGTGAAAACTGGCCAGTTTTTGTTT  550

seq1  GTTTCAGATTTACTTTACTGATGTGTCCTATGTATATGTATATCTCTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGATTTACTTTACTGATGTGTCCTATGTATATGTATATCTCTATG  600

seq1  TGTGCCACATGTGTGCACATTCCAGCAGAGTCAAAAGAAGCTGTTGGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCACATGTGTGCACATTCCAGCAGAGTCAAAAGAAGCTGTTGGATC  650

seq1  CTGCAGATCTAGAGTTAAAGGCAGTTGTGAACTGTCAGATATGAGTGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGATCTAGAGTTAAAGGCAGTTGTGAACTGTCAGATATGAGTGCTC  700

seq1  AGAAGAGAACTAAGGTCGTCTAAAAGAACAGCAAGCTCTTGTTTGCATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGAACTAAGGTCGTCTAAAAGAACAGCAAGCTCTTGTTTGCATTT  750

seq1  GTTTCCTTCCTATGTTTATTACTGCAGGTTGAGATGCAGCCATCAGAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTTCCTATGTTTATTACTGCAGGTTGAGATGCAGCCATCAGAGAA  800

seq1  TCATTTTGAATTACATTAACTCAGTTTTCAGAAGCACAGGCTGAGAAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTGAATTACATTAACTCAGTTTTCAGAAGCACAGGCTGAGAAGCA  850

seq1  CATTGCTTGCCTTCCAAGCTATGGCACAGCAACCTTTCTGAGCATTTTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTTGCCTTCCAAGCTATGGCACAGCAACCTTTCTGAGCATTTTGC  900

seq1  CAGAGCTTAATGACATTTGTCAGTTTCCCAACTGACAATATTTATGAATT  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CAGAGCTTAATGACATTTGTCAGTTTCCCAACTGAC-ATATTTATGAATT  949

seq1  TCTCCATCTGCTACTTTGTCCATGTTATGTATAATCCCATTTTTTTTTCA  1000
      |||||||||||||||||||||||||||||||| ||||   ||||||||||
seq2  TCTCCATCTGCTACTTTGTCCATGTTATGTAT-ATCC--ATTTTTTTTCA  996

seq1  TAAATCTTCCCACTTACAGACACCATCTTTATTTTCCAACAAGAAAAATT  1050
      | ||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  T-AATCTTCCCACTTACAGACACCATCTTTATTTTCC-ACAAGAAAAATT  1044

seq1  TGACATTT-GAGATCTAAAATAGATGTAATCTGACTGGATAGATTTTCAA  1099
      |||||||| ||||||| |||||||||| |||||||||||||||||||| |
seq2  TGACATTTGGAGATCT-AAATAGATGT-ATCTGACTGGATAGATTTTC-A  1091

seq1  TCCTGCACACAATAGTTTACCCAAGTAGCAGAGAGGA-GAAATGAGTCAG  1148
      |||||| |||||||| |||||| ||||||||| |||| ||||||||||||
seq2  TCCTGCCCACAATAG-TTACCC-AGTAGCAGA-AGGAGGAAATGAGTCAG  1138

seq1  GGTAAGTTAAAGATCTCTATTCCTTCTCACAAAG--CATCATAGA  1191
          |||  |||||||||||||||||||||||||  |||||||||
seq2  ---TAGT--AAGATCTCTATTCCTTCTCACAAAGCACATCATAGA  1178


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