BAC Information

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BAC

Clone NameB6Ng01-348L02
Chromosome16 (Build37)
Map Location 71,014,690 - 71,015,786
singlet/doubletsinglet
Overlap genenone
Upstream geneEG664930, Gbe1, D16Ertd519e
Downstream geneLOC100039231
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348L02.bB6Ng01-348L02.g
ACCGA129912GA129913
length1,1661,086
definitionB6Ng01-348L02.b B6Ng01-348L02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtattaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccctaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatgggtacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggattgacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacaaagacaaagtttggagctgagatga
aagaatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggactcagatgtagctgcctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggagagctagagaaagtacccaaggagctaaagggatctgcaacccta
taggtggaacacattatgactaaccagtacccggagctctgactctagct
gcatatgtatcaaagatgctagtcgcatcactggagagaagcccatgacc
gcaaacctttatatgccagtacagggagaccacaggcaaaaggggaggtg
ggttgataatgcaaat

gaattcttcccccatgtgaatgacacatctcagtagccttagccttccgc
caatgacctttgcccaccctggatattctcaccccttccccaaaactata
taacccttgctcaatcccaaataaagaaaatatgttcaaacccactccaa
ataaaaattgcacacacacacacacacaacacaacacaaagaccacatca
gattgctatttctttgaagctcattggaattagccttctcctcaaagagc
tgcctgttctagactttgcttcattcttgcagcctggtgtgcagcatctg
cataccctgatggaaagagagcatttgtctcagacccctctttgcccctc
ctggcctggtgtacaacactgatgccccagaaggaagaggcagattgtgg
acccagccaattctggactttgccctgtcctctgtgagctgttataccag
tgagtagtggcagagcccagtaccacagagagatggctcaggggttaaag
agcacttgccgctcctcaaaaggactgggattcagttctcagtattcaca
tgtctcctctcaatcacctttaactcccattccaaggatataattccttt
gtctggtttccctggacagcaggtacgcacactgtgcactgacatacatg
cagccaaacatccataataataaaaacaaaataaataaaaaatttaatta
aataaataaaaacaaaatagaaaaagtctagactctgggagggtataaaa
atagatttataatgataaataaatgataaaagaaaataataaaagtttta
aaaagcaagacacagtttgttcacactaagctgaacaatgaatatttgtg
taattttcattttttaaagtgattatctccatttgcaactcagctgactt
tgaactcactattgtatgccagattggccttgagttcaccgtttctcacc
tcagcctctgaataatggattaacaaatgtacattgtgctgtttctacaa
agtgctaaataactttatgggttaagcacattatatgatatatctgaaaa
ttgtgcaaaacagagctttcctggaattacagaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_71014690_71015786
seq2: B6Ng01-348L02.g_64_1149 (reverse)

seq1  TCTTCTGT-ATTTCAAGAAAGCTCTGTTTTGCACAATTTTTCAGATTAAT  49
      |||||||| ||| || |||||||||||||||||||| |||||||||    
seq2  TCTTCTGTAATTCCAGGAAAGCTCTGTTTTGCACAA-TTTTCAGAT---A  46

seq1  TATCATATTAATGTTGGCTTTACCCAATAAAGTTATTTAGCACTTTGTAG  99
      ||||||| ||||||  |||| |||| ||||||||||||||||||||||||
seq2  TATCATA-TAATGT--GCTTAACCC-ATAAAGTTATTTAGCACTTTGTAG  92

seq1  AAAACAGCACAATGTACATTTGTTAATCCATTATTCAAGAGGCTGAGGTG  149
       ||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  -AAACAGCACAATGTACATTTGTTAATCCATTATTC-AGAGGCTGAGGTG  140

seq1  AGAAAACGGTGAACTCAAGGCCAATCTGGCATACAATAGTGAGTTCAAAG  199
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AG-AAACGGTGAACTCAAGGCCAATCTGGCATACAATAGTGAGTTCAAAG  189

seq1  TCAGCCTGAGTTGCAAATGGAGATAATCACTTTAAAAAATGAAAATTACA  249
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAG-CTGAGTTGCAAATGGAGATAATCACTTTAAAAAATGAAAATTACA  238

seq1  CAAATATTCATTGTTCAGCTTAGTGTGAACAAACTGTGTCTTGCTTTTTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATTCATTGTTCAGCTTAGTGTGAACAAACTGTGTCTTGCTTTTTA  288

seq1  AAACTTTTATTATTTTCTTTTATCATTTATTTATCATTATAAATCTATTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTTATTATTTTCTTTTATCATTTATTTATCATTATAAATCTATTT  338

seq1  TTATACCCTCCCAGAGTCTAGACTTTTTCTATTTTGTTTTTATTTATTTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACCCTCCCAGAGTCTAGACTTTTTCTATTTTGTTTTTATTTATTTA  388

seq1  ATTAAATTTTTTATTTATTTTGTTTTTATTATTATGGATGTTTGGCTGCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATTTTTTATTTATTTTGTTTTTATTATTATGGATGTTTGGCTGCA  438

seq1  TGTATGTCAGTGCACAGTGTGCGTACCTGCTGTCCAGGGAAACCAGACAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTCAGTGCACAGTGTGCGTACCTGCTGTCCAGGGAAACCAGACAA  488

seq1  AGGAATTATATCCTTGGAATGGGAGTTAAAGGTGATTGAGAGGAGACATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTATATCCTTGGAATGGGAGTTAAAGGTGATTGAGAGGAGACATG  538

seq1  TGAATACTGAGAACTGAATCCCAGTCCTTTTGAGGAGCGGCAAGTGCTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATACTGAGAACTGAATCCCAGTCCTTTTGAGGAGCGGCAAGTGCTCT  588

seq1  TTAACCCCTGAGCCATCTCTCTGTGGTACTGGGCTCTGCCACTACTCACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCCCTGAGCCATCTCTCTGTGGTACTGGGCTCTGCCACTACTCACT  638

seq1  GGTATAACAGCTCACAGAGGACAGGGCAAAGTCCAGAATTGGCTGGGTCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATAACAGCTCACAGAGGACAGGGCAAAGTCCAGAATTGGCTGGGTCC  688

seq1  ACAATCTGCCTCTTCCTTCTGGGGCATCAGTGTTGTACACCAGGCCAGGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTGCCTCTTCCTTCTGGGGCATCAGTGTTGTACACCAGGCCAGGA  738

seq1  GGGGCAAAGAGGGGTCTGAGACAAATGCTCTCTTTCCATCAGGGTATGCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAAAGAGGGGTCTGAGACAAATGCTCTCTTTCCATCAGGGTATGCA  788

seq1  GATGCTGCACACCAGGCTGCAAGAATGAAGCAAAGTCTAGAACAGGCAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGCACACCAGGCTGCAAGAATGAAGCAAAGTCTAGAACAGGCAGC  838

seq1  TCTTTGAGGAGAAGGCTAATTCCAATGAGCTTCAAAGAAATAGCAATCTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAGGAGAAGGCTAATTCCAATGAGCTTCAAAGAAATAGCAATCTG  888

seq1  ATGTGGTCTTTGTGTTGTGTTGTGTGTGTGTGTGTGTGCAATTTTTATTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTCTTTGTGTTGTGTTGTGTGTGTGTGTGTGTGCAATTTTTATTT  938

seq1  GGAGTGGGTTTGAACATATTTTCTTTATTTGGGATTGAGCAAGGGTTATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGGGTTTGAACATATTTTCTTTATTTGGGATTGAGCAAGGGTTATA  988

seq1  TAGTTTTGGGGAAGGGGTGAGAATATCCAGGGTGGGCAAAGGTCATTGGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTGGGGAAGGGGTGAGAATATCCAGGGTGGGCAAAGGTCATTGGC  1038

seq1  GGAAGGCTAAGGCTACTGAGATGTGTCATTCACATGGGGGAAGAATTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGCTAAGGCTACTGAGATGTGTCATTCACATGGGGGAAGAATTC  1086


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